RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 ADGRF1Q5T601 910 aa6.39□□□□□ -1.39
USP48-202ENST00000374730 CCDC81Q6ZN84 652 aa6.39□□□□□ -1.39
USP48-202ENST00000374730 AP5S1Q9NUS5 200 aa6.39□□□□□ -1.39
USP48-202ENST00000374730 KIAA1522Q9P206 1035 aaPredicted RBP6.39□□□□□ -1.39
USP48-202ENST00000374730 SMG5Q9UPR3 1016 aaKnown RBP6.39□□□□□ -1.39
USP48-202ENST00000374730 BRD4O60885 1362 aaPredicted RBP6.39□□□□□ -1.39
USP48-202ENST00000374730 KANK1Q14678 1352 aa6.39□□□□□ -1.39
USP48-202ENST00000374730 SCAPERQ9BY12 1400 aa6.39□□□□□ -1.39
USP48-202ENST00000374730 MYOM2P54296 1465 aa6.39□□□□□ -1.39
USP48-202ENST00000374730 ZNF518AQ6AHZ1 1483 aa6.39□□□□□ -1.39
USP48-202ENST00000374730 HECW2Q9P2P5 1572 aa6.39□□□□□ -1.39
USP48-202ENST00000374730 MAP3K4Q9Y6R4 1608 aa6.39□□□□□ -1.39
USP48-202ENST00000374730 A0A087WZG4 1122 aa6.38□□□□□ -1.39
USP48-202ENST00000374730 H0Y8X5 98 aa6.38□□□□□ -1.39
USP48-202ENST00000374730 ITGA4P13612 1032 aa6.38□□□□□ -1.39
USP48-202ENST00000374730 CEBPAP49715 358 aaPredicted RBP6.38□□□□□ -1.39
USP48-202ENST00000374730 GALK1P51570 392 aa6.38□□□□□ -1.39
USP48-202ENST00000374730 LINC00310P59036 64 aa6.38□□□□□ -1.39
USP48-202ENST00000374730 ZNF445P59923 1031 aa6.38□□□□□ -1.39
USP48-202ENST00000374730 DLG4P78352 724 aa6.38□□□□□ -1.39
USP48-202ENST00000374730 LAPTM5Q13571 262 aa6.38□□□□□ -1.39
USP48-202ENST00000374730 RALBP1Q15311 655 aa6.38□□□□□ -1.39
USP48-202ENST00000374730 NOL9Q5SY16 702 aaKnown RBP6.38□□□□□ -1.39
USP48-202ENST00000374730 OLFML2BQ68BL8 750 aa6.38□□□□□ -1.39
USP48-202ENST00000374730 SIRT2Q8IXJ6 389 aa6.38□□□□□ -1.39
USP48-202ENST00000374730 PLCD4Q9BRC7 762 aa6.38□□□□□ -1.39
USP48-202ENST00000374730 SLC12A9Q9BXP2 914 aa6.38□□□□□ -1.39
USP48-202ENST00000374730 PHAXQ9H814 394 aaKnown RBP6.38□□□□□ -1.39
USP48-202ENST00000374730 INSRP06213 1382 aa6.38□□□□□ -1.39
USP48-202ENST00000374730 LRPPRCP42704 1394 aaKnown RBP6.38□□□□□ -1.39
USP48-202ENST00000374730 PARD3Q8TEW0 1356 aa6.38□□□□□ -1.39
USP48-202ENST00000374730 SMG6Q86US8 1419 aaKnown RBP6.38□□□□□ -1.39
USP48-202ENST00000374730 SYNMO15061 1565 aa6.38□□□□□ -1.39
USP48-202ENST00000374730 MYO3AQ8NEV4 1616 aa6.38□□□□□ -1.39
USP48-202ENST00000374730 MROH2AA6NES4 1674 aa6.38□□□□□ -1.39
USP48-202ENST00000374730 KDM5AP29375 1690 aaKnown RBP6.37□□□□□ -1.39
USP48-202ENST00000374730 MYOM1P52179 1685 aa6.37□□□□□ -1.39
USP48-202ENST00000374730 ABCA6Q8N139 1617 aa6.37□□□□□ -1.39
USP48-202ENST00000374730 FRMPD1Q5SYB0 1578 aa6.37□□□□□ -1.39
USP48-202ENST00000374730 MLH3Q9UHC1 1453 aa6.37□□□□□ -1.39
USP48-202ENST00000374730 POGZQ7Z3K3 1410 aa6.37□□□□□ -1.39
USP48-202ENST00000374730 MYBBP1AQ9BQG0 1328 aaKnown RBP6.37□□□□□ -1.39
USP48-202ENST00000374730 LTBP3Q9NS15 1303 aa6.37□□□□□ -1.39
USP48-202ENST00000374730 WASHC2CQ9Y4E1 1318 aa6.37□□□□□ -1.39
USP48-202ENST00000374730 ABLIM1O14639 778 aa6.37□□□□□ -1.39
USP48-202ENST00000374730 ARL4AP40617 200 aa6.37□□□□□ -1.39
USP48-202ENST00000374730 CIAPIN1Q6FI81 312 aa6.37□□□□□ -1.39
USP48-202ENST00000374730 CYP2R1Q6VVX0 501 aa6.37□□□□□ -1.39
USP48-202ENST00000374730 LCNL1Q6ZST4 164 aa6.37□□□□□ -1.39
USP48-202ENST00000374730 AMIGO3Q86WK7 504 aa6.37□□□□□ -1.39
USP48-202ENST00000374730 TGIF2Q9GZN2 237 aa6.37□□□□□ -1.39
USP48-202ENST00000374730 GCM1Q9NP62 436 aa6.37□□□□□ -1.39
USP48-202ENST00000374730 ACSL6Q9UKU0 697 aa6.37□□□□□ -1.39
USP48-202ENST00000374730 SF3B6Q9Y3B4 125 aaKnown RBP6.37□□□□□ -1.39
USP48-202ENST00000374730 PPLO60437 1756 aa6.36□□□□□ -1.39
USP48-202ENST00000374730 ADGRB3O60242 1522 aa6.36□□□□□ -1.39
USP48-202ENST00000374730 SCAF11Q99590 1463 aaKnown RBP6.36□□□□□ -1.39
USP48-202ENST00000374730 UNCXA6NJT0 531 aa6.36□□□□□ -1.39
USP48-202ENST00000374730 CBFA2T2O43439 604 aa6.36□□□□□ -1.39
USP48-202ENST00000374730 TP53P04637 393 aaPredicted RBP6.36□□□□□ -1.39
USP48-202ENST00000374730 ZSCAN22P10073 491 aaPredicted RBP6.36□□□□□ -1.39
USP48-202ENST00000374730 NOP2P46087 812 aaKnown RBP6.36□□□□□ -1.39
USP48-202ENST00000374730 YBX1P67809 324 aaKnown RBP6.36□□□□□ -1.39
USP48-202ENST00000374730 TCEAL1Q15170 157 aa6.36□□□□□ -1.39
USP48-202ENST00000374730 TMEM132EQ6IEE7 984 aa6.36□□□□□ -1.39
USP48-202ENST00000374730 FAM9BQ8IZU0 186 aa6.36□□□□□ -1.39
USP48-202ENST00000374730 FIBCD1Q8N539 461 aa6.36□□□□□ -1.39
USP48-202ENST00000374730 AFAP1Q8N556 730 aa6.36□□□□□ -1.39
USP48-202ENST00000374730 SEC16BQ96JE7 1060 aa6.36□□□□□ -1.39
USP48-202ENST00000374730 TESK2Q96S53 571 aa6.36□□□□□ -1.39
USP48-202ENST00000374730 WHRNQ9P202 907 aa6.36□□□□□ -1.39
USP48-202ENST00000374730 ZNF451Q9Y4E5 1061 aa6.36□□□□□ -1.39
USP48-202ENST00000374730 ZC3H13Q5T200 1668 aaKnown RBP6.36□□□□□ -1.39
USP48-202ENST00000374730 SETBP1Q9Y6X0 1596 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 NEO1Q92859 1461 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 NRXN1Q9ULB1 1477 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 DISP3Q9P2K9 1392 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 A0A1W2PQH9 124 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 FGF10O15520 208 aaPredicted RBP6.35□□□□□ -1.39
USP48-202ENST00000374730 GSTM1P09488 218 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 NASPP49321 788 aaPredicted RBP6.35□□□□□ -1.39
USP48-202ENST00000374730 SRSF3P84103 164 aaKnown RBP6.35□□□□□ -1.39
USP48-202ENST00000374730 POU4F1Q01851 419 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 TMEM62Q0P6H9 643 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 RGL3Q3MIN7 710 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 HLA-DQA1Q5Y7H0 255 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 NAT16Q8N8M0 369 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 TMEM52Q8NDY8 209 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 PNISRQ8TF01 805 aaKnown RBP6.35□□□□□ -1.39
USP48-202ENST00000374730 BRF1Q92994 677 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 JMJD8Q96S16 334 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 HAUS7Q99871 368 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 POLR3GLQ9BT43 218 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 KLHL25Q9H0H3 589 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 TNFRSF12AQ9NP84 129 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 STRIP2Q9ULQ0 834 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 DIS3Q9Y2L1 958 aaKnown RBP6.35□□□□□ -1.39
USP48-202ENST00000374730 RICTORQ6R327 1708 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 RIMBP3CA6NJZ7 1639 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 RIMBP3BA6NNM3 1639 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms