RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 GOLGA8HP0CJ92 632 aa16.19■□□□□ 0.18
CXCL12-202ENST00000374426 BRDTQ58F21 947 aaPredicted RBP16.19■□□□□ 0.18
CXCL12-202ENST00000374426 FAM47CQ5HY64 1035 aa16.19■□□□□ 0.18
CXCL12-202ENST00000374426 NFRKBQ6P4R8 1299 aa16.19■□□□□ 0.18
CXCL12-202ENST00000374426 CPVLQ9H3G5 476 aa16.19■□□□□ 0.18
CXCL12-202ENST00000374426 SCN5AQ14524 2016 aa16.19■□□□□ 0.18
CXCL12-202ENST00000374426 NEDD4P46934 1319 aa16.19■□□□□ 0.18
CXCL12-202ENST00000374426 PITPNM1O00562 1244 aa16.18■□□□□ 0.18
CXCL12-202ENST00000374426 KPNA6O60684 536 aa16.18■□□□□ 0.18
CXCL12-202ENST00000374426 TXNP10599 105 aaKnown RBP16.18■□□□□ 0.18
CXCL12-202ENST00000374426 MRPS5P82675 430 aaKnown RBP16.18■□□□□ 0.18
CXCL12-202ENST00000374426 USH1GQ495M9 461 aa16.18■□□□□ 0.18
CXCL12-202ENST00000374426 GPATCH4Q5T3I0 446 aaKnown RBP16.18■□□□□ 0.18
CXCL12-202ENST00000374426 RGS22Q8NE09 1264 aa16.18■□□□□ 0.18
CXCL12-202ENST00000374426 ADAMTS19Q8TE59 1207 aa16.18■□□□□ 0.18
CXCL12-202ENST00000374426 MPHOSPH6Q99547 160 aaKnown RBP16.18■□□□□ 0.18
CXCL12-202ENST00000374426 ZKSCAN3Q9BRR0 538 aa16.18■□□□□ 0.18
CXCL12-202ENST00000374426 UBA5Q9GZZ9 404 aa16.18■□□□□ 0.18
CXCL12-202ENST00000374426 RNF41Q9H4P4 317 aaPredicted RBP16.18■□□□□ 0.18
CXCL12-202ENST00000374426 TRIM6-TRIM34B2RNG4 842 aa16.17■□□□□ 0.18
CXCL12-202ENST00000374426 CA3P07451 260 aa16.17■□□□□ 0.18
CXCL12-202ENST00000374426 IQCF3P0C7M6 154 aa16.17■□□□□ 0.18
CXCL12-202ENST00000374426 RFC2P35250 354 aa16.17■□□□□ 0.18
CXCL12-202ENST00000374426 TMEM67Q5HYA8 995 aa16.17■□□□□ 0.18
CXCL12-202ENST00000374426 CCDC62Q6P9F0 684 aa16.17■□□□□ 0.18
CXCL12-202ENST00000374426 DGKHQ86XP1 1220 aa16.17■□□□□ 0.18
CXCL12-202ENST00000374426 TBC1D5Q92609 795 aa16.17■□□□□ 0.18
CXCL12-202ENST00000374426 ESR2Q92731 530 aa16.17■□□□□ 0.18
CXCL12-202ENST00000374426 LNPKQ9C0E8 428 aa16.17■□□□□ 0.18
CXCL12-202ENST00000374426 TET1Q8NFU7 2136 aa16.16■□□□□ 0.18
CXCL12-202ENST00000374426 B4DLN1 442 aa16.16■□□□□ 0.18
CXCL12-202ENST00000374426 MRPL12P52815 198 aaKnown RBP16.16■□□□□ 0.18
CXCL12-202ENST00000374426 PTPN11Q06124 597 aaPredicted RBP16.16■□□□□ 0.18
CXCL12-202ENST00000374426 RILPL2Q969X0 211 aa16.16■□□□□ 0.18
CXCL12-202ENST00000374426 COL20A1Q9P218 1284 aa16.16■□□□□ 0.18
CXCL12-202ENST00000374426 RFXAPO00287 272 aa16.15■□□□□ 0.18
CXCL12-202ENST00000374426 ACTN1P12814 892 aa16.15■□□□□ 0.18
CXCL12-202ENST00000374426 SDSP20132 328 aa16.15■□□□□ 0.18
CXCL12-202ENST00000374426 CDC37Q16543 378 aaPredicted RBP16.15■□□□□ 0.18
CXCL12-202ENST00000374426 MICALL1Q8N3F8 863 aa16.15■□□□□ 0.18
CXCL12-202ENST00000374426 RETREG2Q8NC44 543 aa16.15■□□□□ 0.18
CXCL12-202ENST00000374426 PNMA1Q8ND90 353 aa16.15■□□□□ 0.18
CXCL12-202ENST00000374426 SYTL5Q8TDW5 730 aaPredicted RBP16.15■□□□□ 0.18
CXCL12-202ENST00000374426 AFG1LQ8WV93 481 aa16.15■□□□□ 0.18
CXCL12-202ENST00000374426 CTAGE1Q96RT6 745 aa16.15■□□□□ 0.18
CXCL12-202ENST00000374426 SLC9A7Q96T83 725 aa16.15■□□□□ 0.18
CXCL12-202ENST00000374426 UHRF1Q96T88 793 aaPredicted RBP16.15■□□□□ 0.18
CXCL12-202ENST00000374426 TANC1Q9C0D5 1861 aa16.14■□□□□ 0.17
CXCL12-202ENST00000374426 EPOPA6NHQ4 379 aa16.14■□□□□ 0.17
CXCL12-202ENST00000374426 ZNF213O14771 459 aa16.14■□□□□ 0.17
CXCL12-202ENST00000374426 KDM4AO75164 1064 aa16.14■□□□□ 0.17
CXCL12-202ENST00000374426 ARHGEF15O94989 841 aa16.14■□□□□ 0.17
CXCL12-202ENST00000374426 MFAP1P55081 439 aaKnown RBP16.14■□□□□ 0.17
CXCL12-202ENST00000374426 CHMP4BP1P59074 171 aa16.14■□□□□ 0.17
CXCL12-202ENST00000374426 BFSP2Q13515 415 aa16.14■□□□□ 0.17
CXCL12-202ENST00000374426 LY6KQ17RY6 165 aa16.14■□□□□ 0.17
CXCL12-202ENST00000374426 ADGRF4Q8IZF3 695 aa16.14■□□□□ 0.17
CXCL12-202ENST00000374426 PHOSPHO2Q8TCD6 241 aa16.14■□□□□ 0.17
CXCL12-202ENST00000374426 ANKS1AQ92625 1134 aa16.14■□□□□ 0.17
CXCL12-202ENST00000374426 TAAR1Q96RJ0 339 aa16.14■□□□□ 0.17
CXCL12-202ENST00000374426 FTOQ9C0B1 505 aaKnown RBP eCLIP16.14■□□□□ 0.17
CXCL12-202ENST00000374426 MAF1Q9H063 256 aa16.14■□□□□ 0.17
CXCL12-202ENST00000374426 CERS4Q9HA82 394 aa16.14■□□□□ 0.17
CXCL12-202ENST00000374426 NOD1Q9Y239 953 aa16.14■□□□□ 0.17
CXCL12-202ENST00000374426 MTCH2Q9Y6C9 303 aa16.14■□□□□ 0.17
CXCL12-202ENST00000374426 ABCB11O95342 1321 aa16.14■□□□□ 0.17
CXCL12-202ENST00000374426 MMP3P08254 477 aa16.13■□□□□ 0.17
CXCL12-202ENST00000374426 POU3F3P20264 500 aaPredicted RBP16.13■□□□□ 0.17
CXCL12-202ENST00000374426 TFF2Q03403 129 aa16.13■□□□□ 0.17
CXCL12-202ENST00000374426 ARHGAP1Q07960 439 aa16.13■□□□□ 0.17
CXCL12-202ENST00000374426 PTGISQ16647 500 aa16.13■□□□□ 0.17
CXCL12-202ENST00000374426 SEPT14Q6ZU15 432 aa16.13■□□□□ 0.17
CXCL12-202ENST00000374426 IQCA1Q86XH1 822 aa16.13■□□□□ 0.17
CXCL12-202ENST00000374426 HERC6Q8IVU3 1022 aa16.13■□□□□ 0.17
CXCL12-202ENST00000374426 SMC5Q8IY18 1101 aa16.13■□□□□ 0.17
CXCL12-202ENST00000374426 NSUN6Q8TEA1 469 aaKnown RBP16.13■□□□□ 0.17
CXCL12-202ENST00000374426 KAT2BQ92831 832 aa16.13■□□□□ 0.17
CXCL12-202ENST00000374426 TSPYL2Q9H2G4 693 aaPredicted RBP16.13■□□□□ 0.17
CXCL12-202ENST00000374426 KAT14Q9H8E8 782 aa16.13■□□□□ 0.17
CXCL12-202ENST00000374426 B4E1Z4 1266 aa16.12■□□□□ 0.17
CXCL12-202ENST00000374426 GH1P01241 217 aa16.12■□□□□ 0.17
CXCL12-202ENST00000374426 BMP1P13497 986 aa16.12■□□□□ 0.17
CXCL12-202ENST00000374426 NT5C2P49902 561 aa16.12■□□□□ 0.17
CXCL12-202ENST00000374426 TAP1Q03518 808 aa16.12■□□□□ 0.17
CXCL12-202ENST00000374426 GPNMBQ14956 572 aa16.12■□□□□ 0.17
CXCL12-202ENST00000374426 QRICH1Q2TAL8 776 aa16.12■□□□□ 0.17
CXCL12-202ENST00000374426 CCDC178Q5BJE1 867 aa16.12■□□□□ 0.17
CXCL12-202ENST00000374426 GDF6Q6KF10 455 aaPredicted RBP16.12■□□□□ 0.17
CXCL12-202ENST00000374426 B4GALNT3Q6L9W6 998 aa16.12■□□□□ 0.17
CXCL12-202ENST00000374426 CWC27Q6UX04 472 aaKnown RBP16.12■□□□□ 0.17
CXCL12-202ENST00000374426 SESTD1Q86VW0 696 aa16.12■□□□□ 0.17
CXCL12-202ENST00000374426 PLEKHM2Q8IWE5 1019 aa16.12■□□□□ 0.17
CXCL12-202ENST00000374426 ENAHQ8N8S7 591 aaPredicted RBP16.12■□□□□ 0.17
CXCL12-202ENST00000374426 IL27Q8NEV9 243 aa16.12■□□□□ 0.17
CXCL12-202ENST00000374426 IWS1Q96ST2 819 aa16.12■□□□□ 0.17
CXCL12-202ENST00000374426 ZSCAN10Q96SZ4 725 aaPredicted RBP16.12■□□□□ 0.17
CXCL12-202ENST00000374426 RMDN3Q96TC7 470 aa16.12■□□□□ 0.17
CXCL12-202ENST00000374426 LAMA4Q16363 1823 aa16.12■□□□□ 0.17
CXCL12-202ENST00000374426 TRIP12Q14669 1992 aaPredicted RBP16.11■□□□□ 0.17
CXCL12-202ENST00000374426 BRWD1Q9NSI6 2320 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms