RNA–Protein interactions for RNA: ENST00000373544.5

RABEPK-203, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-203ENST00000373544 UBASH3AP57075 661 aa13.62□□□□□ -0.23
RABEPK-203ENST00000373544 TMEM266Q2M3C6 531 aa13.62□□□□□ -0.23
RABEPK-203ENST00000373544 CPXCR1Q8N123 301 aa13.62□□□□□ -0.23
RABEPK-203ENST00000373544 WRNIP1Q96S55 665 aa13.62□□□□□ -0.23
RABEPK-203ENST00000373544 KBTBD4Q9NVX7 518 aa13.62□□□□□ -0.23
RABEPK-203ENST00000373544 CDK11BP21127 795 aaKnown RBP13.62□□□□□ -0.23
RABEPK-203ENST00000373544 FXR2P51116 673 aaKnown RBP eCLIP13.62□□□□□ -0.23
RABEPK-203ENST00000373544 SPP2Q13103 211 aa13.62□□□□□ -0.23
RABEPK-203ENST00000373544 MCM6Q14566 821 aa13.62□□□□□ -0.23
RABEPK-203ENST00000373544 KMT5BQ4FZB7 885 aa13.62□□□□□ -0.23
RABEPK-203ENST00000373544 CHURC1Q8WUH1 139 aa13.62□□□□□ -0.23
RABEPK-203ENST00000373544 PYM1Q9BRP8 204 aaKnown RBP13.62□□□□□ -0.23
RABEPK-203ENST00000373544 TANGO6Q9C0B7 1094 aa13.62□□□□□ -0.23
RABEPK-203ENST00000373544 SH2D4AQ9H788 454 aa13.62□□□□□ -0.23
RABEPK-203ENST00000373544 HOMER2Q9NSB8 354 aa13.62□□□□□ -0.23
RABEPK-203ENST00000373544 DACH1Q9UI36 760 aa13.62□□□□□ -0.23
RABEPK-203ENST00000373544 PCDHA12Q9UN75 941 aa13.62□□□□□ -0.23
RABEPK-203ENST00000373544 SYNRGQ9UMZ2 1314 aa13.61□□□□□ -0.23
RABEPK-203ENST00000373544 CDC25BP30305 580 aa13.61□□□□□ -0.23
RABEPK-203ENST00000373544 GOLGA8FQ08AF8 430 aa13.61□□□□□ -0.23
RABEPK-203ENST00000373544 GOLGA8DPQ0D2H9 430 aa13.61□□□□□ -0.23
RABEPK-203ENST00000373544 EEF2KMTQ96G04 330 aa13.61□□□□□ -0.23
RABEPK-203ENST00000373544 CALML4Q96GE6 196 aa13.61□□□□□ -0.23
RABEPK-203ENST00000373544 RANBP17Q9H2T7 1088 aaKnown RBP13.61□□□□□ -0.23
RABEPK-203ENST00000373544 BLOC1S4Q9NUP1 217 aa13.61□□□□□ -0.23
RABEPK-203ENST00000373544 KLRC4O43908 158 aa13.61□□□□□ -0.23
RABEPK-203ENST00000373544 DYMQ7RTS9 669 aa13.61□□□□□ -0.23
RABEPK-203ENST00000373544 LDHDQ86WU2 507 aa13.61□□□□□ -0.23
RABEPK-203ENST00000373544 CREBRFQ8IUR6 639 aa13.61□□□□□ -0.23
RABEPK-203ENST00000373544 ENOX1Q8TC92 643 aaKnown RBP13.61□□□□□ -0.23
RABEPK-203ENST00000373544 CDK5RAP3Q96JB5 506 aa13.61□□□□□ -0.23
RABEPK-203ENST00000373544 INTS13Q9NVM9 706 aa13.61□□□□□ -0.23
RABEPK-203ENST00000373544 SYNPO2Q9UMS6 1093 aa13.61□□□□□ -0.23
RABEPK-203ENST00000373544 TRIM49BA6NDI0 452 aa13.6□□□□□ -0.23
RABEPK-203ENST00000373544 ZNF500O60304 480 aaPredicted RBP13.6□□□□□ -0.23
RABEPK-203ENST00000373544 CTNND1O60716 968 aaKnown RBP13.6□□□□□ -0.23
RABEPK-203ENST00000373544 YBX3P16989 372 aaKnown RBP eCLIP13.6□□□□□ -0.239e-6■□□□□ 10.4
RABEPK-203ENST00000373544 PRCPP42785 496 aa13.6□□□□□ -0.23
RABEPK-203ENST00000373544 ASIC1P78348 528 aa13.6□□□□□ -0.23
RABEPK-203ENST00000373544 AP3B2Q13367 1082 aa13.6□□□□□ -0.23
RABEPK-203ENST00000373544 GPC2Q8N158 579 aa13.6□□□□□ -0.23
RABEPK-203ENST00000373544 CRYGNQ8WXF5 182 aa13.6□□□□□ -0.23
RABEPK-203ENST00000373544 GLT8D2Q9H1C3 349 aa13.6□□□□□ -0.23
RABEPK-203ENST00000373544 RNF181Q9P0P0 153 aa13.6□□□□□ -0.23
RABEPK-203ENST00000373544 ZNF18P17022 549 aa13.59□□□□□ -0.23
RABEPK-203ENST00000373544 ORC2Q13416 577 aaPredicted RBP13.59□□□□□ -0.23
RABEPK-203ENST00000373544 KRT79Q5XKE5 535 aa13.59□□□□□ -0.23
RABEPK-203ENST00000373544 LENG9Q96B70 501 aa13.59□□□□□ -0.23
RABEPK-203ENST00000373544 WNK4Q96J92 1243 aa13.59□□□□□ -0.23
RABEPK-203ENST00000373544 SYT17Q9BSW7 474 aa13.59□□□□□ -0.23
RABEPK-203ENST00000373544 TRIM9Q9C026 710 aa13.59□□□□□ -0.23
RABEPK-203ENST00000373544 EMILIN3Q9NT22 766 aa13.59□□□□□ -0.23
RABEPK-203ENST00000373544 FEM1BQ9UK73 627 aa13.59□□□□□ -0.23
RABEPK-203ENST00000373544 FLOT1O75955 427 aa13.59□□□□□ -0.23
RABEPK-203ENST00000373544 FCER1AP12319 257 aa13.59□□□□□ -0.23
RABEPK-203ENST00000373544 GCFC2P16383 781 aaKnown RBP13.59□□□□□ -0.23
RABEPK-203ENST00000373544 VCAM1P19320 739 aa13.59□□□□□ -0.23
RABEPK-203ENST00000373544 ERCC5P28715 1186 aaPredicted RBP13.59□□□□□ -0.23
RABEPK-203ENST00000373544 ZNF76P36508 570 aa13.59□□□□□ -0.23
RABEPK-203ENST00000373544 MMP14P50281 582 aa13.59□□□□□ -0.23
RABEPK-203ENST00000373544 USP11P51784 963 aa13.59□□□□□ -0.23
RABEPK-203ENST00000373544 ZNF658Q5TYW1 1059 aaPredicted RBP13.59□□□□□ -0.23
RABEPK-203ENST00000373544 HOOK2Q96ED9 719 aa13.59□□□□□ -0.23
RABEPK-203ENST00000373544 RAVER2Q9HCJ3 691 aaKnown RBP13.59□□□□□ -0.23
RABEPK-203ENST00000373544 KCNMB3Q9NPA1 279 aa13.59□□□□□ -0.23
RABEPK-203ENST00000373544 CCPG1Q9ULG6 757 aa13.59□□□□□ -0.23
RABEPK-203ENST00000373544 SBF1O95248 1867 aa13.59□□□□□ -0.23
RABEPK-203ENST00000373544 ZNF536O15090 1300 aa13.59□□□□□ -0.23
RABEPK-203ENST00000373544 POTEB3A0JP26 581 aa13.58□□□□□ -0.23
RABEPK-203ENST00000373544 POTECB2RU33 542 aa13.58□□□□□ -0.23
RABEPK-203ENST00000373544 NFIBO00712 420 aa13.58□□□□□ -0.23
RABEPK-203ENST00000373544 SSBP05455 408 aaKnown RBP eCLIP13.58□□□□□ -0.23
RABEPK-203ENST00000373544 SREBF1P36956 1147 aa13.58□□□□□ -0.23
RABEPK-203ENST00000373544 PMS1P54277 932 aaKnown RBP13.58□□□□□ -0.23
RABEPK-203ENST00000373544 POTEBQ6S5H4 581 aa13.58□□□□□ -0.23
RABEPK-203ENST00000373544 LRRC8AQ8IWT6 810 aa13.58□□□□□ -0.23
RABEPK-203ENST00000373544 NELFBQ8WX92 580 aa13.58□□□□□ -0.23
RABEPK-203ENST00000373544 RAB34Q9BZG1 259 aa13.58□□□□□ -0.23
RABEPK-203ENST00000373544 ZHX2Q9Y6X8 837 aa13.58□□□□□ -0.23
RABEPK-203ENST00000373544 MYMKA6NI61 221 aa13.58□□□□□ -0.24
RABEPK-203ENST00000373544 E9PMD0 336 aa13.58□□□□□ -0.24
RABEPK-203ENST00000373544 CCT6AP40227 531 aaKnown RBP13.58□□□□□ -0.24
RABEPK-203ENST00000373544 PDE4DQ08499 809 aa13.58□□□□□ -0.24
RABEPK-203ENST00000373544 RAD51AP2Q09MP3 1159 aa13.58□□□□□ -0.24
RABEPK-203ENST00000373544 PDIA5Q14554 519 aa13.58□□□□□ -0.24
RABEPK-203ENST00000373544 FAM160B2Q86V87 743 aa13.58□□□□□ -0.24
RABEPK-203ENST00000373544 KIAA1524Q8TCG1 905 aa13.58□□□□□ -0.24
RABEPK-203ENST00000373544 LARP4BQ92615 738 aaKnown RBP13.58□□□□□ -0.24
RABEPK-203ENST00000373544 SLF1Q9BQI6 1058 aa13.58□□□□□ -0.24
RABEPK-203ENST00000373544 KIAA1683Q9H0B3 1180 aa13.58□□□□□ -0.24
RABEPK-203ENST00000373544 RPAP3Q9H6T3 665 aaPredicted RBP13.58□□□□□ -0.24
RABEPK-203ENST00000373544 GCOM1H8Y6P7 765 aaPredicted RBP13.57□□□□□ -0.24
RABEPK-203ENST00000373544 MSH4O15457 936 aa13.57□□□□□ -0.24
RABEPK-203ENST00000373544 POLR2MP0CAP2 368 aa13.57□□□□□ -0.24
RABEPK-203ENST00000373544 ALAS1P13196 640 aa13.57□□□□□ -0.24
RABEPK-203ENST00000373544 HMGCS2P54868 508 aa13.57□□□□□ -0.24
RABEPK-203ENST00000373544 STK4Q13043 487 aa13.57□□□□□ -0.24
RABEPK-203ENST00000373544 NOLC1Q14978 699 aaKnown RBP eCLIP13.57□□□□□ -0.24
RABEPK-203ENST00000373544 TPD52L1Q16890 204 aaPredicted RBP13.57□□□□□ -0.24
RABEPK-203ENST00000373544 SPATA1Q5VX52 437 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms