RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 FTCDO95954 541 aa20.7■□□□□ 0.9
PRDM1-202ENST00000369091 CCDC63Q8NA47 563 aa20.7■□□□□ 0.9
PRDM1-202ENST00000369091 C3orf20Q8ND61 904 aa20.7■□□□□ 0.9
PRDM1-202ENST00000369091 MDM1Q8TC05 714 aa20.7■□□□□ 0.9
PRDM1-202ENST00000369091 DUSP9Q99956 384 aaKnown RBP20.7■□□□□ 0.9
PRDM1-202ENST00000369091 KDM4CQ9H3R0 1056 aa20.7■□□□□ 0.9
PRDM1-202ENST00000369091 TAF1DQ9H5J8 278 aaPredicted RBP20.7■□□□□ 0.9
PRDM1-202ENST00000369091 ANKRD33BA6NCL7 494 aa20.7■□□□□ 0.9
PRDM1-202ENST00000369091 CIAO1O76071 339 aa20.7■□□□□ 0.9
PRDM1-202ENST00000369091 CTNNA1P35221 906 aaKnown RBP20.7■□□□□ 0.9
PRDM1-202ENST00000369091 ICA1Q05084 483 aa20.7■□□□□ 0.9
PRDM1-202ENST00000369091 SNX1Q13596 522 aa20.7■□□□□ 0.9
PRDM1-202ENST00000369091 TTI2Q6NXR4 508 aa20.7■□□□□ 0.9
PRDM1-202ENST00000369091 CSGALNACT2Q8N6G5 542 aa20.7■□□□□ 0.9
PRDM1-202ENST00000369091 PLBD2Q8NHP8 589 aa20.7■□□□□ 0.9
PRDM1-202ENST00000369091 AGAP11Q8TF27 550 aa20.7■□□□□ 0.9
PRDM1-202ENST00000369091 YIPF3Q9GZM5 350 aa20.7■□□□□ 0.9
PRDM1-202ENST00000369091 BATF3Q9NR55 127 aa20.7■□□□□ 0.9
PRDM1-202ENST00000369091 SLC4A4Q9Y6R1 1079 aa20.7■□□□□ 0.9
PRDM1-202ENST00000369091 SMNDC1O75940 238 aaKnown RBP eCLIP20.69■□□□□ 0.9
PRDM1-202ENST00000369091 TRIM37O94972 964 aa20.69■□□□□ 0.9
PRDM1-202ENST00000369091 UPP2O95045 317 aa20.69■□□□□ 0.9
PRDM1-202ENST00000369091 MAGEA1P43355 309 aa20.69■□□□□ 0.9
PRDM1-202ENST00000369091 MTIF2P46199 727 aaKnown RBP20.69■□□□□ 0.9
PRDM1-202ENST00000369091 ERVK-9P63128 1117 aa20.69■□□□□ 0.9
PRDM1-202ENST00000369091 ATP2C1P98194 919 aaPredicted RBP20.69■□□□□ 0.9
PRDM1-202ENST00000369091 MIS18BP1Q6P0N0 1132 aa20.69■□□□□ 0.9
PRDM1-202ENST00000369091 FANCBQ8NB91 859 aa20.69■□□□□ 0.9
PRDM1-202ENST00000369091 CNOT6LQ96LI5 555 aaKnown RBP20.69■□□□□ 0.9
PRDM1-202ENST00000369091 PLIN2Q99541 437 aa20.69■□□□□ 0.9
PRDM1-202ENST00000369091 SLC52A2Q9HAB3 445 aa20.69■□□□□ 0.9
PRDM1-202ENST00000369091 MCM7P33993 719 aa20.69■□□□□ 0.9
PRDM1-202ENST00000369091 MAGOHP61326 146 aaKnown RBP20.69■□□□□ 0.9
PRDM1-202ENST00000369091 GFPT1Q06210 699 aaPredicted RBP20.69■□□□□ 0.9
PRDM1-202ENST00000369091 GRIPAP1Q4V328 841 aa20.69■□□□□ 0.9
PRDM1-202ENST00000369091 MIIPQ5JXC2 388 aa20.69■□□□□ 0.9
PRDM1-202ENST00000369091 THEMIS2Q5TEJ8 643 aa20.69■□□□□ 0.9
PRDM1-202ENST00000369091 CCDC26Q8TAB7 109 aa20.69■□□□□ 0.9
PRDM1-202ENST00000369091 MAGOHBQ96A72 148 aaKnown RBP20.69■□□□□ 0.9
PRDM1-202ENST00000369091 FAM207AQ9NSI2 230 aaPredicted RBP20.69■□□□□ 0.9
PRDM1-202ENST00000369091 PANK4Q9NVE7 773 aa20.69■□□□□ 0.9
PRDM1-202ENST00000369091 CWC25Q9NXE8 425 aaPredicted RBP20.69■□□□□ 0.9
PRDM1-202ENST00000369091 SPATA31A3Q5VYP0 1347 aa20.69■□□□□ 0.9
PRDM1-202ENST00000369091 NFAT5O94916 1531 aa20.69■□□□□ 0.9
PRDM1-202ENST00000369091 CCT8L1PA6NM43 557 aa20.68■□□□□ 0.9
PRDM1-202ENST00000369091 DIAPH2O60879 1101 aa20.68■□□□□ 0.9
PRDM1-202ENST00000369091 GHRP10912 638 aa20.68■□□□□ 0.9
PRDM1-202ENST00000369091 ECHS1P30084 290 aa20.68■□□□□ 0.9
PRDM1-202ENST00000369091 SLC1A4P43007 532 aa20.68■□□□□ 0.9
PRDM1-202ENST00000369091 PKN1Q16512 942 aa20.68■□□□□ 0.9
PRDM1-202ENST00000369091 ZNF654Q8IZM8 581 aa20.68■□□□□ 0.9
PRDM1-202ENST00000369091 PHF20Q9BVI0 1012 aa20.68■□□□□ 0.9
PRDM1-202ENST00000369091 NOC4LQ9BVI4 516 aaKnown RBP20.68■□□□□ 0.9
PRDM1-202ENST00000369091 NEUROG2Q9H2A3 272 aa20.68■□□□□ 0.9
PRDM1-202ENST00000369091 CDK17Q00537 523 aa20.68■□□□□ 0.9
PRDM1-202ENST00000369091 FAM133BQ5BKY9 247 aaKnown RBP20.68■□□□□ 0.9
PRDM1-202ENST00000369091 SAMD1Q6SPF0 538 aaPredicted RBP20.68■□□□□ 0.9
PRDM1-202ENST00000369091 LRIG3Q6UXM1 1119 aa20.68■□□□□ 0.9
PRDM1-202ENST00000369091 RETREG2Q8NC44 543 aa20.68■□□□□ 0.9
PRDM1-202ENST00000369091 CCDC47Q96A33 483 aaKnown RBP20.68■□□□□ 0.9
PRDM1-202ENST00000369091 PKD1L3Q7Z443 1732 aa20.68■□□□□ 0.9
PRDM1-202ENST00000369091 ORC4O43929 436 aa20.67■□□□□ 0.9
PRDM1-202ENST00000369091 FLT3P36888 993 aa20.67■□□□□ 0.9
PRDM1-202ENST00000369091 STAT6P42226 847 aa20.67■□□□□ 0.9
PRDM1-202ENST00000369091 HLFQ16534 295 aa20.67■□□□□ 0.9
PRDM1-202ENST00000369091 UBLCP1Q8WVY7 318 aaPredicted RBP20.67■□□□□ 0.9
PRDM1-202ENST00000369091 NAPBQ9H115 298 aa20.67■□□□□ 0.9
PRDM1-202ENST00000369091 NID2Q14112 1375 aa20.67■□□□□ 0.9
PRDM1-202ENST00000369091 SNRPA1P09661 255 aaKnown RBP20.67■□□□□ 0.9
PRDM1-202ENST00000369091 L3MBTL3Q96JM7 780 aaPredicted RBP20.67■□□□□ 0.9
PRDM1-202ENST00000369091 NDST4Q9H3R1 872 aa20.67■□□□□ 0.9
PRDM1-202ENST00000369091 LRP6O75581 1613 aa20.67■□□□□ 0.9
PRDM1-202ENST00000369091 SNUPNO95149 360 aaKnown RBP20.66■□□□□ 0.9
PRDM1-202ENST00000369091 PRCCQ92733 491 aaPredicted RBP20.66■□□□□ 0.9
PRDM1-202ENST00000369091 ACSBG1Q96GR2 724 aa20.66■□□□□ 0.9
PRDM1-202ENST00000369091 NOX5Q96PH1 765 aa20.66■□□□□ 0.9
PRDM1-202ENST00000369091 STRBPQ96SI9 672 aaKnown RBP20.66■□□□□ 0.9
PRDM1-202ENST00000369091 PLAGL2Q9UPG8 496 aa20.66■□□□□ 0.9
PRDM1-202ENST00000369091 MYH7P12883 1935 aa20.66■□□□□ 0.9
PRDM1-202ENST00000369091 PSMA7O14818 248 aa20.66■□□□□ 0.9
PRDM1-202ENST00000369091 ADAMTS3O15072 1205 aa20.66■□□□□ 0.9
PRDM1-202ENST00000369091 PALMO75781 387 aa20.66■□□□□ 0.9
PRDM1-202ENST00000369091 PDE6AP16499 860 aa20.66■□□□□ 0.9
PRDM1-202ENST00000369091 SEMA3FQ13275 785 aa20.66■□□□□ 0.9
PRDM1-202ENST00000369091 AKNAD1Q5T1N1 836 aa20.66■□□□□ 0.9
PRDM1-202ENST00000369091 IFNL3Q8IZI9 196 aa20.66■□□□□ 0.9
PRDM1-202ENST00000369091 DISP2A7MBM2 1401 aa20.66■□□□□ 0.9
PRDM1-202ENST00000369091 PP2D1A8MPX8 630 aa20.65■□□□□ 0.9
PRDM1-202ENST00000369091 PAEPP09466 180 aa20.65■□□□□ 0.9
PRDM1-202ENST00000369091 MFSD6Q6ZSS7 791 aa20.65■□□□□ 0.9
PRDM1-202ENST00000369091 CCDC197Q8NCU1 140 aa20.65■□□□□ 0.9
PRDM1-202ENST00000369091 FBXL5Q9UKA1 691 aa20.65■□□□□ 0.9
PRDM1-202ENST00000369091 SLC12A4Q9UP95 1085 aa20.65■□□□□ 0.9
PRDM1-202ENST00000369091 AGAP1Q9UPQ3 857 aa20.65■□□□□ 0.9
PRDM1-202ENST00000369091 TMEM94Q12767 1356 aa20.65■□□□□ 0.9
PRDM1-202ENST00000369091 LRRC53A6NM62 1247 aa20.65■□□□□ 0.9
PRDM1-202ENST00000369091 KLRC4O43908 158 aa20.65■□□□□ 0.9
PRDM1-202ENST00000369091 CLSTN1O94985 981 aa20.65■□□□□ 0.9
PRDM1-202ENST00000369091 ANKRD40Q6AI12 368 aa20.65■□□□□ 0.9
PRDM1-202ENST00000369091 P3H4Q92791 437 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms