RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 CGNQ9P2M7 1197 aaKnown RBP11.82□□□□□ -0.52
PTPRK-205ENST00000368213 MTRF1LQ9UGC7 380 aaKnown RBP11.82□□□□□ -0.52
PTPRK-205ENST00000368213 CDC42BPBQ9Y5S2 1711 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 CD163L1Q9NR16 1453 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 USP42Q9H9J4 1324 aaKnown RBP11.82□□□□□ -0.52
PTPRK-205ENST00000368213 SPDYE16A6NNV3 312 aaPredicted RBP11.82□□□□□ -0.52
PTPRK-205ENST00000368213 CYP21A2P08686 494 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 CALRP27797 417 aaKnown RBP11.82□□□□□ -0.52
PTPRK-205ENST00000368213 ITKQ08881 620 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 MTMR1Q13613 665 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 KRT81Q14533 505 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 SPDYE2Q495Y8 402 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 DSTYKQ6XUX3 929 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 NBPF11Q86T75 865 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 TCP11Q8WWU5 503 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 ACCSQ96QU6 501 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 LSM14BQ9BX40 385 aaKnown RBP11.82□□□□□ -0.52
PTPRK-205ENST00000368213 TPCN1Q9ULQ1 816 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 NOC2LQ9Y3T9 749 aaKnown RBP11.82□□□□□ -0.52
PTPRK-205ENST00000368213 MED14O60244 1454 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 SFMBT2Q5VUG0 894 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 DGKHQ86XP1 1220 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 CCDC94Q9BW85 323 aaPredicted RBP11.82□□□□□ -0.52
PTPRK-205ENST00000368213 ZNF70Q9UC06 446 aaPredicted RBP11.82□□□□□ -0.52
PTPRK-205ENST00000368213 ABCB11O95342 1321 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 MEIS1O00470 390 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 GAP43P17677 238 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 TFAMQ00059 246 aaKnown RBP11.82□□□□□ -0.52
PTPRK-205ENST00000368213 NEDD9Q14511 834 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 CCDC84Q86UT8 332 aaPredicted RBP11.82□□□□□ -0.52
PTPRK-205ENST00000368213 ELMOD1Q8N336 334 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 PPM1KQ8N3J5 372 aa11.82□□□□□ -0.52
PTPRK-205ENST00000368213 STRBPQ96SI9 672 aaKnown RBP11.82□□□□□ -0.52
PTPRK-205ENST00000368213 CRCPO75575 148 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 KCNJ6P48051 423 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 ZNF365Q70YC5 407 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 SAMD7Q7Z3H4 446 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 URGCPQ8TCY9 931 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 SLC39A2Q9NP94 309 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 DIP2AQ14689 1571 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 FDX1P10109 184 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 XRCC6P12956 609 aaKnown RBP eCLIP11.81□□□□□ -0.52
PTPRK-205ENST00000368213 NLRP12P59046 1061 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 ZNF569Q5MCW4 686 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 TRPM1Q7Z4N2 1603 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 FAM170AA1A519 330 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 TRAPPC10P48553 1259 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 JAK3P52333 1124 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 PNOCQ13519 176 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 SLC44A5Q8NCS7 719 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 CCT6BQ92526 530 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 CLSTN2Q9H4D0 955 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 PNPLA6Q8IY17 1366 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 ABCA6Q8N139 1617 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 SH2B2O14492 632 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-205ENST00000368213 CYP2B6P20813 491 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 TWF2Q6IBS0 349 aaKnown RBP11.81□□□□□ -0.52
PTPRK-205ENST00000368213 C1orf228Q6PIY5 440 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 LMTK2Q8IWU2 1503 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 PIK3C2BO00750 1634 aa11.81□□□□□ -0.52
PTPRK-205ENST00000368213 CROCC2H7BZ55 1655 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 ZBTB5O15062 677 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 EPHX2P34913 555 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 PDE6CP51160 858 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 MYO1EQ12965 1108 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 ADAM9Q13443 819 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 LARP4BQ92615 738 aaKnown RBP11.8□□□□□ -0.52
PTPRK-205ENST00000368213 LSG1Q9H089 658 aaKnown RBP11.8□□□□□ -0.52
PTPRK-205ENST00000368213 FAM207AQ9NSI2 230 aaPredicted RBP11.8□□□□□ -0.52
PTPRK-205ENST00000368213 NCOA3Q9Y6Q9 1424 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 STAT1P42224 750 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 RNASE9P60153 205 aaKnown RBP11.8□□□□□ -0.52
PTPRK-205ENST00000368213 SF3B3Q15393 1217 aaKnown RBP11.8□□□□□ -0.52
PTPRK-205ENST00000368213 GEN1Q17RS7 908 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 GBP6Q6ZN66 633 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 TBC1D31Q96DN5 1066 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 METTL14Q9HCE5 456 aaKnown RBP11.8□□□□□ -0.52
PTPRK-205ENST00000368213 NLRC4Q9NPP4 1024 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 VEGFAP15692 232 aaPredicted RBP11.8□□□□□ -0.52
PTPRK-205ENST00000368213 UAP1Q16222 522 aaPredicted RBP11.8□□□□□ -0.52
PTPRK-205ENST00000368213 SPATA33Q96N06 139 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 PIDD1Q9HB75 910 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 DCP1AQ9NPI6 582 aaPredicted RBP11.8□□□□□ -0.52
PTPRK-205ENST00000368213 NFE2L3Q9Y4A8 694 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.8□□□□□ -0.52
PTPRK-205ENST00000368213 F5H6K3 240 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 POLR2BP30876 1174 aaKnown RBP11.8□□□□□ -0.52
PTPRK-205ENST00000368213 KLRC3Q07444 240 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 SCRN1Q12765 414 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 AP3B2Q13367 1082 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 PDZD4Q76G19 769 aaPredicted RBP11.8□□□□□ -0.52
PTPRK-205ENST00000368213 ZNF34Q8IZ26 560 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 SYMPKQ92797 1274 aaKnown RBP11.8□□□□□ -0.52
PTPRK-205ENST00000368213 BAG1Q99933 345 aaPredicted RBP11.8□□□□□ -0.52
PTPRK-205ENST00000368213 PLCD4Q9BRC7 762 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 RPF1Q9H9Y2 349 aaKnown RBP11.8□□□□□ -0.52
PTPRK-205ENST00000368213 RRAGCQ9HB90 399 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 PPANQ9NQ55 473 aaKnown RBP11.8□□□□□ -0.52
PTPRK-205ENST00000368213 C19orf81C9J6K1 198 aa11.8□□□□□ -0.52
PTPRK-205ENST00000368213 CYP26C1Q6V0L0 522 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms