RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 SPATS2LQ9NUQ6 558 aaKnown RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 TPX2Q9ULW0 747 aaKnown RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 ABCC8Q09428 1581 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 ARHGAP10A1A4S6 786 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 KBTBD13C9JR72 458 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 HSPD1P10809 573 aaKnown RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 PHBP35232 272 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 PMS1P54277 932 aaKnown RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 C8orf74Q6P047 294 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 MIS18BP1Q6P0N0 1132 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 PATL1Q86TB9 770 aaKnown RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 PHF21AQ96BD5 680 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 NCOA5Q9HCD5 579 aaKnown RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 LRWD1Q9UFC0 647 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 RBM8AQ9Y5S9 174 aaKnown RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 ACEP12821 1306 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 PLEKHH2Q8IVE3 1493 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 MOCS2O96007 188 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 PSMC1P62191 440 aaKnown RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 MUM1Q2TAK8 710 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 PPM1KQ8N3J5 372 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 NBPF15Q8N660 670 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 RAPGEF5Q92565 580 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 SPACA7Q96KW9 195 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 CFLARO15519 480 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 AP1G2O75843 785 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 GDF11O95390 407 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 GOLGA8HP0CJ92 632 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 EEF1GP26641 437 aaKnown RBP6.29□□□□□ -1.4
BRCA1-203ENST00000357654 SNAP25P60880 206 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 SUPT20HL1Q3ZLR7 823 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 VWA3BQ502W6 1294 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 ZNF394Q53GI3 561 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 ARSJQ5FYB0 599 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-203ENST00000357654 KIAA1755Q5JYT7 1200 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 LRCH2Q5VUJ6 765 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 RRM2BQ7LG56 351 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 GPBP1Q86WP2 473 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 CSGALNACT2Q8N6G5 542 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 FAM76AQ8TAV0 307 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 ZSCAN18Q8TBC5 510 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-203ENST00000357654 HSPH1Q92598 858 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 NUDCD1Q96RS6 583 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 EGFL8Q99944 293 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 TEKT3Q9BXF9 490 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 PRR12Q9ULL5 1215 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 EIF3CLB5ME19 914 aaKnown RBP6.29□□□□□ -1.4
BRCA1-203ENST00000357654 E5RI56 91 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 POC1B-GALNT4F8VUJ3 575 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 SERPINI2O75830 405 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 GUCA1CO95843 209 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 ST8SIA6P61647 398 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 GTF2H3Q13889 308 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 MTERF2Q49AM1 385 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 MEI1Q5TIA1 1274 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 RAB42Q8N4Z0 105 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.29□□□□□ -1.4
BRCA1-203ENST00000357654 CFAP61Q8NHU2 1237 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 STAMQ92783 540 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 IGFLR1Q9H665 355 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 ARFGAP3Q9NP61 516 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 NLRC4Q9NPP4 1024 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 GIMAP4Q9NUV9 329 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 CAPN11Q9UMQ6 739 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 PCDHA1Q9Y5I3 950 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 SMCO2A6NFE2 343 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 TMEM232C9JQI7 657 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 TMCC1O94876 653 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 SLC9A1P19634 815 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 IL15P40933 162 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-203ENST00000357654 MAP3K7CLP57077 242 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 INAQ16352 499 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 SYTL3Q4VX76 610 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 MFSD14CQ5VZR4 134 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 OR6B2Q6IFH4 312 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 PLEKHM3Q6ZWE6 761 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 KDELC2Q7Z4H8 507 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 VN1R5Q7Z5H4 357 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 KRT77Q7Z794 578 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.29□□□□□ -1.4
BRCA1-203ENST00000357654 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.29□□□□□ -1.4
BRCA1-203ENST00000357654 HYOU1Q9Y4L1 999 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 RNF10Q8N5U6 811 aaKnown RBP6.29□□□□□ -1.4
BRCA1-203ENST00000357654 OR6B3Q8NGW1 331 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 ZNF212Q9UDV6 495 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 RAB23Q9ULC3 237 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 FAF1Q9UNN5 650 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-203ENST00000357654 PCDHGA4Q9Y5G9 962 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 N6AMT1Q9Y5N5 214 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 ENC1O14682 589 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 CAPN1P07384 714 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 SKILP12757 684 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 PLCD1P51178 756 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 KRT39Q6A163 491 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 TWF2Q6IBS0 349 aaKnown RBP6.29□□□□□ -1.4
BRCA1-203ENST00000357654 PKN3Q6P5Z2 889 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 CMTR1Q8N1G2 835 aaKnown RBP6.29□□□□□ -1.4
BRCA1-203ENST00000357654 ARMC2Q8NEN0 867 aa6.29□□□□□ -1.4
BRCA1-203ENST00000357654 ENOX1Q8TC92 643 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms