RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 IL17RBQ9NRM6 502 aa18.63■□□□□ 0.57
COPE-202ENST00000349893 ISY1Q9ULR0 285 aaKnown RBP18.63■□□□□ 0.57
COPE-202ENST00000349893 NFIBO00712 420 aa18.62■□□□□ 0.57
COPE-202ENST00000349893 CXCL10P02778 98 aa18.62■□□□□ 0.57
COPE-202ENST00000349893 APPP05067 770 aa18.62■□□□□ 0.57
COPE-202ENST00000349893 PPP2R5BQ15173 497 aa18.62■□□□□ 0.57
COPE-202ENST00000349893 GJD3Q8N144 294 aa18.62■□□□□ 0.57
COPE-202ENST00000349893 SCFD2Q8WU76 684 aa18.62■□□□□ 0.57
COPE-202ENST00000349893 NACAP1Q9BZK3 213 aa18.62■□□□□ 0.57
COPE-202ENST00000349893 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.62■□□□□ 0.57
COPE-202ENST00000349893 GJB5O95377 273 aa18.61■□□□□ 0.57
COPE-202ENST00000349893 PARNO95453 639 aaKnown RBP18.61■□□□□ 0.57
COPE-202ENST00000349893 SLC3A2P08195 630 aaKnown RBP18.61■□□□□ 0.57
COPE-202ENST00000349893 PPARAQ07869 468 aa18.61■□□□□ 0.57
COPE-202ENST00000349893 RASGRP2Q7LDG7 609 aa18.61■□□□□ 0.57
COPE-202ENST00000349893 CCDC155Q8N6L0 562 aa18.61■□□□□ 0.57
COPE-202ENST00000349893 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.61■□□□□ 0.57
COPE-202ENST00000349893 RAD9AQ99638 391 aa18.61■□□□□ 0.57
COPE-202ENST00000349893 STX8Q9UNK0 236 aa18.61■□□□□ 0.57
COPE-202ENST00000349893 DEFB103AP81534 67 aa18.6■□□□□ 0.57
COPE-202ENST00000349893 CNKSR3Q6P9H4 555 aa18.6■□□□□ 0.57
COPE-202ENST00000349893 PPP1R13LQ8WUF5 828 aa18.6■□□□□ 0.57
COPE-202ENST00000349893 DCAF4Q8WV16 495 aa18.6■□□□□ 0.57
COPE-202ENST00000349893 CLEC4DQ8WXI8 215 aa18.6■□□□□ 0.57
COPE-202ENST00000349893 TGS1Q96RS0 853 aaKnown RBP18.6■□□□□ 0.57
COPE-202ENST00000349893 LINC01553A4QN01 128 aa18.59■□□□□ 0.57
COPE-202ENST00000349893 SMARCA5O60264 1052 aaPredicted RBP18.59■□□□□ 0.57
COPE-202ENST00000349893 ALADP13716 330 aa18.59■□□□□ 0.57
COPE-202ENST00000349893 SELPP16109 830 aa18.59■□□□□ 0.57
COPE-202ENST00000349893 PTGISQ16647 500 aa18.59■□□□□ 0.57
COPE-202ENST00000349893 SLC30A10Q6XR72 485 aa18.59■□□□□ 0.57
COPE-202ENST00000349893 TMCO2Q7Z6W1 182 aaPredicted RBP18.59■□□□□ 0.57
COPE-202ENST00000349893 DNERQ8NFT8 737 aa18.59■□□□□ 0.57
COPE-202ENST00000349893 KCNH6Q9H252 994 aa18.59■□□□□ 0.57
COPE-202ENST00000349893 NOD1Q9Y239 953 aa18.59■□□□□ 0.57
COPE-202ENST00000349893 ABHD14A-ACY1A0A1B0GW23 586 aa18.58■□□□□ 0.56
COPE-202ENST00000349893 PTPDC1A2A3K4 754 aa18.58■□□□□ 0.56
COPE-202ENST00000349893 NMT2O60551 498 aa18.58■□□□□ 0.56
COPE-202ENST00000349893 EFCAB14O75071 495 aa18.58■□□□□ 0.56
COPE-202ENST00000349893 LRRC8DQ7L1W4 858 aa18.58■□□□□ 0.56
COPE-202ENST00000349893 DHX38Q92620 1227 aaKnown RBP18.58■□□□□ 0.56
COPE-202ENST00000349893 COPS5Q92905 334 aa18.58■□□□□ 0.56
COPE-202ENST00000349893 CHMP4CQ96CF2 233 aa18.58■□□□□ 0.56
COPE-202ENST00000349893 ZBED2Q9BTP6 218 aa18.58■□□□□ 0.56
COPE-202ENST00000349893 NAPBQ9H115 298 aa18.58■□□□□ 0.56
COPE-202ENST00000349893 CHMP4BQ9H444 224 aaKnown RBP18.58■□□□□ 0.56
COPE-202ENST00000349893 PNMA2Q9UL42 364 aa18.58■□□□□ 0.56
COPE-202ENST00000349893 GRXCR2A6NFK2 248 aa18.57■□□□□ 0.56
COPE-202ENST00000349893 TSPY2A6NKD2 308 aa18.57■□□□□ 0.56
COPE-202ENST00000349893 FOXP2O15409 715 aa18.57■□□□□ 0.56
COPE-202ENST00000349893 NBNO60934 754 aa18.57■□□□□ 0.56
COPE-202ENST00000349893 ARIH2O95376 493 aa18.57■□□□□ 0.56
COPE-202ENST00000349893 TXNP10599 105 aaKnown RBP18.57■□□□□ 0.56
COPE-202ENST00000349893 KCNA5P22460 613 aa18.57■□□□□ 0.56
COPE-202ENST00000349893 MRE11P49959 708 aa18.57■□□□□ 0.56
COPE-202ENST00000349893 PDE4DQ08499 809 aa18.57■□□□□ 0.56
COPE-202ENST00000349893 TCTN1Q2MV58 587 aa18.57■□□□□ 0.56
COPE-202ENST00000349893 PUS10Q3MIT2 529 aaKnown RBP18.57■□□□□ 0.56
COPE-202ENST00000349893 SYDE2Q5VT97 1194 aa18.57■□□□□ 0.56
COPE-202ENST00000349893 GDF6Q6KF10 455 aaPredicted RBP18.57■□□□□ 0.56
COPE-202ENST00000349893 CCDC62Q6P9F0 684 aa18.57■□□□□ 0.56
COPE-202ENST00000349893 RNF207Q6ZRF8 634 aa18.57■□□□□ 0.56
COPE-202ENST00000349893 NEK9Q8TD19 979 aa18.57■□□□□ 0.56
COPE-202ENST00000349893 SEC62Q99442 399 aaKnown RBP18.57■□□□□ 0.56
COPE-202ENST00000349893 MPHOSPH6Q99547 160 aaKnown RBP18.57■□□□□ 0.56
COPE-202ENST00000349893 ZNF318Q5VUA4 2279 aa18.57■□□□□ 0.56
COPE-202ENST00000349893 POTEB3A0JP26 581 aa18.56■□□□□ 0.56
COPE-202ENST00000349893 IL9P15248 144 aa18.56■□□□□ 0.56
COPE-202ENST00000349893 RPS6P62753 249 aaKnown RBP18.56■□□□□ 0.56
COPE-202ENST00000349893 MKRN4PQ13434 485 aaPredicted RBP18.56■□□□□ 0.56
COPE-202ENST00000349893 TTBK2Q6IQ55 1244 aa18.56■□□□□ 0.56
COPE-202ENST00000349893 PTCRAQ6ISU1 281 aaPredicted RBP18.56■□□□□ 0.56
COPE-202ENST00000349893 POTEBQ6S5H4 581 aa18.56■□□□□ 0.56
COPE-202ENST00000349893 KAT2BQ92831 832 aa18.56■□□□□ 0.56
COPE-202ENST00000349893 C5orf42Q9H799 3197 aa18.55■□□□□ 0.56
COPE-202ENST00000349893 WDR19Q8NEZ3 1342 aa18.55■□□□□ 0.56
COPE-202ENST00000349893 FGRP09769 529 aa18.55■□□□□ 0.56
COPE-202ENST00000349893 CKBP12277 381 aa18.55■□□□□ 0.56
COPE-202ENST00000349893 CALML3P27482 149 aa18.55■□□□□ 0.56
COPE-202ENST00000349893 SLC16A2P36021 539 aa18.55■□□□□ 0.56
COPE-202ENST00000349893 NHLH1Q02575 133 aa18.55■□□□□ 0.56
COPE-202ENST00000349893 COL19A1Q14993 1142 aa18.55■□□□□ 0.56
COPE-202ENST00000349893 CCDC96Q2M329 555 aa18.55■□□□□ 0.56
COPE-202ENST00000349893 TRAF7Q6Q0C0 670 aa18.55■□□□□ 0.56
COPE-202ENST00000349893 GPATCH3Q96I76 525 aa18.55■□□□□ 0.56
COPE-202ENST00000349893 ANAPC4Q9UJX5 808 aa18.55■□□□□ 0.56
COPE-202ENST00000349893 MTUS1Q9ULD2 1270 aa18.55■□□□□ 0.56
COPE-202ENST00000349893 B4DLN1 442 aa18.54■□□□□ 0.56
COPE-202ENST00000349893 ORC4O43929 436 aa18.54■□□□□ 0.56
COPE-202ENST00000349893 MMP3P08254 477 aa18.54■□□□□ 0.56
COPE-202ENST00000349893 SSTR3P32745 418 aaPredicted RBP18.54■□□□□ 0.56
COPE-202ENST00000349893 MRPL12P52815 198 aaKnown RBP18.54■□□□□ 0.56
COPE-202ENST00000349893 ZMYM1Q5SVZ6 1142 aa18.54■□□□□ 0.56
COPE-202ENST00000349893 TSHZ3Q63HK5 1081 aa18.54■□□□□ 0.56
COPE-202ENST00000349893 RGS22Q8NE09 1264 aa18.54■□□□□ 0.56
COPE-202ENST00000349893 AFG1LQ8WV93 481 aa18.54■□□□□ 0.56
COPE-202ENST00000349893 MAF1Q9H063 256 aa18.54■□□□□ 0.56
COPE-202ENST00000349893 INCENPQ9NQS7 918 aa18.54■□□□□ 0.56
COPE-202ENST00000349893 GTF2IRD1Q9UHL9 959 aa18.54■□□□□ 0.56
COPE-202ENST00000349893 DCXO43602 365 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms