RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 CDHR1Q96JP9 859 aa25.16■■□□□ 1.62
NPAS3-201ENST00000346562 KMT5AQ9NQR1 393 aa25.16■■□□□ 1.62
NPAS3-201ENST00000346562 CYP4A11Q02928 519 aa25.16■■□□□ 1.62
NPAS3-201ENST00000346562 ELMSAN1Q6PJG2 1045 aa25.16■■□□□ 1.62
NPAS3-201ENST00000346562 MYRIPQ8NFW9 859 aa25.16■■□□□ 1.62
NPAS3-201ENST00000346562 TTC4O95801 387 aa25.16■■□□□ 1.62
NPAS3-201ENST00000346562 CRKLP46109 303 aaKnown RBP25.16■■□□□ 1.62
NPAS3-201ENST00000346562 ASPHQ12797 758 aa25.16■■□□□ 1.62
NPAS3-201ENST00000346562 WDR11Q9BZH6 1224 aa25.16■■□□□ 1.62
NPAS3-201ENST00000346562 PPME1Q9Y570 386 aa25.16■■□□□ 1.62
NPAS3-201ENST00000346562 GJA10Q969M2 543 aa25.15■■□□□ 1.62
NPAS3-201ENST00000346562 MED7O43513 233 aa25.15■■□□□ 1.62
NPAS3-201ENST00000346562 RAPH1Q70E73 1250 aa25.15■■□□□ 1.62
NPAS3-201ENST00000346562 PPP2R2CQ9Y2T4 447 aa25.15■■□□□ 1.62
NPAS3-201ENST00000346562 TRAPPC10P48553 1259 aa25.15■■□□□ 1.62
NPAS3-201ENST00000346562 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.15■■□□□ 1.62
NPAS3-201ENST00000346562 LMBRD1Q9NUN5 540 aa25.15■■□□□ 1.62
NPAS3-201ENST00000346562 ZNF215Q9UL58 517 aaPredicted RBP25.15■■□□□ 1.62
NPAS3-201ENST00000346562 BRD1O95696 1058 aa25.15■■□□□ 1.62
NPAS3-201ENST00000346562 GABPB1Q06547 395 aaPredicted RBP25.15■■□□□ 1.62
NPAS3-201ENST00000346562 SLC38A10Q9HBR0 1119 aa25.15■■□□□ 1.62
NPAS3-201ENST00000346562 ZSWIM6Q9HCJ5 1215 aa25.15■■□□□ 1.62
NPAS3-201ENST00000346562 SGK1O00141 431 aa25.14■■□□□ 1.62
NPAS3-201ENST00000346562 LRRC24Q50LG9 513 aa25.14■■□□□ 1.62
NPAS3-201ENST00000346562 PSPC1Q8WXF1 523 aaKnown RBP25.14■■□□□ 1.62
NPAS3-201ENST00000346562 AK8Q96MA6 479 aa25.14■■□□□ 1.62
NPAS3-201ENST00000346562 CLRN2A0PK11 232 aa25.14■■□□□ 1.62
NPAS3-201ENST00000346562 PTGDRQ13258 359 aa25.14■■□□□ 1.62
NPAS3-201ENST00000346562 LARP4BQ92615 738 aaKnown RBP25.14■■□□□ 1.62
NPAS3-201ENST00000346562 GPC4O75487 556 aa25.14■■□□□ 1.61
NPAS3-201ENST00000346562 FGAP02671 866 aa25.14■■□□□ 1.61
NPAS3-201ENST00000346562 INHBAP08476 426 aa25.14■■□□□ 1.61
NPAS3-201ENST00000346562 LRRC8CQ8TDW0 803 aa25.14■■□□□ 1.61
NPAS3-201ENST00000346562 CPSF3Q9UKF6 684 aaKnown RBP25.14■■□□□ 1.61
NPAS3-201ENST00000346562 LOC102724428A0A0B4J2F2 783 aa25.14■■□□□ 1.61
NPAS3-201ENST00000346562 MYO1FO00160 1098 aa25.14■■□□□ 1.61
NPAS3-201ENST00000346562 SIK1P57059 783 aa25.14■■□□□ 1.61
NPAS3-201ENST00000346562 IQCB1Q15051 598 aa25.14■■□□□ 1.61
NPAS3-201ENST00000346562 CNOT6LQ96LI5 555 aaKnown RBP25.14■■□□□ 1.61
NPAS3-201ENST00000346562 USP28Q96RU2 1077 aa25.14■■□□□ 1.61
NPAS3-201ENST00000346562 ABCC4O15439 1325 aa25.14■■□□□ 1.61
NPAS3-201ENST00000346562 KAT6BQ8WYB5 2073 aa25.14■■□□□ 1.61
NPAS3-201ENST00000346562 STX1BP61266 288 aa25.13■■□□□ 1.61
NPAS3-201ENST00000346562 PTH1RQ03431 593 aa25.13■■□□□ 1.61
NPAS3-201ENST00000346562 SF3A3Q12874 501 aaKnown RBP eCLIP25.13■■□□□ 1.61
NPAS3-201ENST00000346562 SPATS2Q86XZ4 545 aaKnown RBP25.13■■□□□ 1.61
NPAS3-201ENST00000346562 ADAMTS12P58397 1594 aa25.13■■□□□ 1.61
NPAS3-201ENST00000346562 ADD1P35611 737 aaKnown RBP25.13■■□□□ 1.61
NPAS3-201ENST00000346562 GNGT1P63211 74 aa25.13■■□□□ 1.61
NPAS3-201ENST00000346562 RBM6P78332 1123 aaKnown RBP25.13■■□□□ 1.61
NPAS3-201ENST00000346562 PDE1BQ01064 536 aa25.13■■□□□ 1.61
NPAS3-201ENST00000346562 TMEM206Q9H813 350 aa25.13■■□□□ 1.61
NPAS3-201ENST00000346562 ANXA13P27216 316 aa25.13■■□□□ 1.61
NPAS3-201ENST00000346562 PI4K2BQ8TCG2 481 aa25.13■■□□□ 1.61
NPAS3-201ENST00000346562 NLRP7Q8WX94 980 aa25.13■■□□□ 1.61
NPAS3-201ENST00000346562 IGSF3O75054 1194 aa25.13■■□□□ 1.61
NPAS3-201ENST00000346562 GCFC2P16383 781 aaKnown RBP25.13■■□□□ 1.61
NPAS3-201ENST00000346562 KIAA1841Q6NSI8 718 aa25.13■■□□□ 1.61
NPAS3-201ENST00000346562 INO80B-WBP1J3KQ70 363 aa25.13■■□□□ 1.61
NPAS3-201ENST00000346562 TAB3Q8N5C8 712 aaPredicted RBP25.13■■□□□ 1.61
NPAS3-201ENST00000346562 INO80BQ9C086 356 aaPredicted RBP25.13■■□□□ 1.61
NPAS3-201ENST00000346562 GREM2Q9H772 168 aa25.13■■□□□ 1.61
NPAS3-201ENST00000346562 TMEM2Q9UHN6 1383 aa25.13■■□□□ 1.61
NPAS3-201ENST00000346562 DACT3Q96B18 629 aaPredicted RBP25.12■■□□□ 1.61
NPAS3-201ENST00000346562 BICRAQ9NZM4 1560 aa25.12■■□□□ 1.61
NPAS3-201ENST00000346562 APBA1Q02410 837 aa25.12■■□□□ 1.61
NPAS3-201ENST00000346562 GBP5Q96PP8 586 aa25.12■■□□□ 1.61
NPAS3-201ENST00000346562 PDE8BO95263 885 aa25.12■■□□□ 1.61
NPAS3-201ENST00000346562 AFPP02771 609 aaKnown RBP25.12■■□□□ 1.61
NPAS3-201ENST00000346562 SMYD2Q9NRG4 433 aa25.12■■□□□ 1.61
NPAS3-201ENST00000346562 GCNAQ96QF7 691 aa25.12■■□□□ 1.61
NPAS3-201ENST00000346562 SPZ1Q9BXG8 430 aa25.12■■□□□ 1.61
NPAS3-201ENST00000346562 SLC8A2Q9UPR5 921 aa25.12■■□□□ 1.61
NPAS3-201ENST00000346562 ABCC12Q96J65 1359 aa25.11■■□□□ 1.61
NPAS3-201ENST00000346562 ZNF772Q68DY9 489 aaPredicted RBP25.11■■□□□ 1.61
NPAS3-201ENST00000346562 ADAT2Q7Z6V5 191 aaKnown RBP25.11■■□□□ 1.61
NPAS3-201ENST00000346562 EFCAB13Q8IY85 973 aa25.11■■□□□ 1.61
NPAS3-201ENST00000346562 ATP6V1E2Q96A05 226 aa25.11■■□□□ 1.61
NPAS3-201ENST00000346562 BAIAP2L1Q9UHR4 511 aa25.11■■□□□ 1.61
NPAS3-201ENST00000346562 FMNL1O95466 1100 aaPredicted RBP25.11■■□□□ 1.61
NPAS3-201ENST00000346562 KPNA2P52292 529 aaKnown RBP25.11■■□□□ 1.61
NPAS3-201ENST00000346562 COPB1P53618 953 aaKnown RBP25.11■■□□□ 1.61
NPAS3-201ENST00000346562 PTPROQ16827 1216 aa25.11■■□□□ 1.61
NPAS3-201ENST00000346562 DESI2Q9BSY9 194 aa25.11■■□□□ 1.61
NPAS3-201ENST00000346562 C17orf53Q8N3J3 647 aaPredicted RBP25.11■■□□□ 1.61
NPAS3-201ENST00000346562 GPR108Q9NPR9 543 aa25.11■■□□□ 1.61
NPAS3-201ENST00000346562 F8W8V4 182 aa25.11■■□□□ 1.61
NPAS3-201ENST00000346562 CASP2P42575 452 aa25.11■■□□□ 1.61
NPAS3-201ENST00000346562 MYO1EQ12965 1108 aa25.11■■□□□ 1.61
NPAS3-201ENST00000346562 CC2D2BQ6DHV5 1058 aa25.11■■□□□ 1.61
NPAS3-201ENST00000346562 EAF2Q96CJ1 260 aaPredicted RBP25.11■■□□□ 1.61
NPAS3-201ENST00000346562 GDAP1L1Q96MZ0 367 aa25.11■■□□□ 1.61
NPAS3-201ENST00000346562 QTRT2Q9H974 415 aaKnown RBP25.11■■□□□ 1.61
NPAS3-201ENST00000346562 BTBD18B2RXH4 712 aa25.11■■□□□ 1.61
NPAS3-201ENST00000346562 TMCO4Q5TGY1 634 aa25.11■■□□□ 1.61
NPAS3-201ENST00000346562 SPICE1Q8N0Z3 855 aa25.11■■□□□ 1.61
NPAS3-201ENST00000346562 FOXP1Q9H334 677 aaPredicted RBP25.11■■□□□ 1.61
NPAS3-201ENST00000346562 KANSL2Q9H9L4 492 aa25.11■■□□□ 1.61
NPAS3-201ENST00000346562 SART1O43290 800 aaKnown RBP25.1■■□□□ 1.61
NPAS3-201ENST00000346562 ARL4AP40617 200 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms