RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 TRMT13Q9NUP7 481 aaKnown RBP22.68■■□□□ 1.22
ITGA4-202ENST00000339307 NKRFO15226 690 aaKnown RBP eCLIP22.67■■□□□ 1.22
ITGA4-202ENST00000339307 SEPT14Q6ZU15 432 aa22.67■■□□□ 1.22
ITGA4-202ENST00000339307 OTOP2Q7RTS6 562 aa22.67■■□□□ 1.22
ITGA4-202ENST00000339307 RGS22Q8NE09 1264 aa22.67■■□□□ 1.22
ITGA4-202ENST00000339307 PPP1R13LQ8WUF5 828 aa22.67■■□□□ 1.22
ITGA4-202ENST00000339307 RUFY2Q8WXA3 655 aa22.67■■□□□ 1.22
ITGA4-202ENST00000339307 TAAR1Q96RJ0 339 aa22.67■■□□□ 1.22
ITGA4-202ENST00000339307 NOC4LQ9BVI4 516 aaKnown RBP22.67■■□□□ 1.22
ITGA4-202ENST00000339307 ZNF576Q9H609 170 aa22.67■■□□□ 1.22
ITGA4-202ENST00000339307 MRPL11Q9Y3B7 192 aaKnown RBP22.67■■□□□ 1.22
ITGA4-202ENST00000339307 TMEM265A0A087WTH1 108 aa22.66■■□□□ 1.22
ITGA4-202ENST00000339307 SUPT20HL2P0C7V6 817 aa22.66■■□□□ 1.22
ITGA4-202ENST00000339307 CYP2C9P11712 490 aa22.66■■□□□ 1.22
ITGA4-202ENST00000339307 GSPT1P15170 499 aaKnown RBP22.66■■□□□ 1.22
ITGA4-202ENST00000339307 EDNRBP24530 442 aa22.66■■□□□ 1.22
ITGA4-202ENST00000339307 PBX2P40425 430 aa22.66■■□□□ 1.22
ITGA4-202ENST00000339307 GRIN2CQ14957 1233 aa22.66■■□□□ 1.22
ITGA4-202ENST00000339307 JMJD4Q9H9V9 463 aa22.66■■□□□ 1.22
ITGA4-202ENST00000339307 CFBP00751 764 aa22.65■■□□□ 1.22
ITGA4-202ENST00000339307 ARHGEF16Q5VV41 709 aa22.65■■□□□ 1.22
ITGA4-202ENST00000339307 CHST3Q7LGC8 479 aa22.65■■□□□ 1.22
ITGA4-202ENST00000339307 SYTL5Q8TDW5 730 aaPredicted RBP22.65■■□□□ 1.22
ITGA4-202ENST00000339307 NSUN6Q8TEA1 469 aaKnown RBP22.65■■□□□ 1.22
ITGA4-202ENST00000339307 SCLYQ96I15 445 aa22.65■■□□□ 1.22
ITGA4-202ENST00000339307 RMDN3Q96TC7 470 aa22.65■■□□□ 1.22
ITGA4-202ENST00000339307 NBPF20Q3BBV1 942 aa22.65■■□□□ 1.22
ITGA4-202ENST00000339307 CYB5R4Q7L1T6 521 aa22.65■■□□□ 1.22
ITGA4-202ENST00000339307 RPUSD2Q8IZ73 545 aaKnown RBP22.65■■□□□ 1.22
ITGA4-202ENST00000339307 STAG2Q8N3U4 1231 aa22.65■■□□□ 1.22
ITGA4-202ENST00000339307 PBX4Q9BYU1 374 aa22.65■■□□□ 1.22
ITGA4-202ENST00000339307 MSRAQ9UJ68 235 aa22.65■■□□□ 1.22
ITGA4-202ENST00000339307 ERICH2A1L162 156 aa22.64■■□□□ 1.21
ITGA4-202ENST00000339307 ZBBXA8MT70 800 aa22.64■■□□□ 1.21
ITGA4-202ENST00000339307 KLRF2D3W0D1 207 aa22.64■■□□□ 1.21
ITGA4-202ENST00000339307 KPNA6O60684 536 aa22.64■■□□□ 1.21
ITGA4-202ENST00000339307 ARIH2O95376 493 aa22.64■■□□□ 1.21
ITGA4-202ENST00000339307 EIF2AK2P19525 551 aaKnown RBP22.64■■□□□ 1.21
ITGA4-202ENST00000339307 STXBP2Q15833 593 aa22.64■■□□□ 1.21
ITGA4-202ENST00000339307 LY6KQ17RY6 165 aa22.64■■□□□ 1.21
ITGA4-202ENST00000339307 HERVK_113Q902F9 699 aa22.64■■□□□ 1.21
ITGA4-202ENST00000339307 AMNQ9BXJ7 453 aa22.64■■□□□ 1.21
ITGA4-202ENST00000339307 WNT8AQ9H1J5 351 aa22.64■■□□□ 1.21
ITGA4-202ENST00000339307 CXXC1Q9P0U4 656 aaPredicted RBP22.64■■□□□ 1.21
ITGA4-202ENST00000339307 COL20A1Q9P218 1284 aa22.64■■□□□ 1.21
ITGA4-202ENST00000339307 NOD1Q9Y239 953 aa22.64■■□□□ 1.21
ITGA4-202ENST00000339307 U3KPZ7 1027 aaPredicted RBP22.64■■□□□ 1.21
ITGA4-202ENST00000339307 DEFB128Q7Z7B8 93 aa22.63■■□□□ 1.21
ITGA4-202ENST00000339307 RALYLQ86SE5 291 aaKnown RBP22.63■■□□□ 1.21
ITGA4-202ENST00000339307 A6NJR5 290 aa22.62■■□□□ 1.21
ITGA4-202ENST00000339307 IFIT3O14879 490 aaKnown RBP22.62■■□□□ 1.21
ITGA4-202ENST00000339307 CHMLP26374 656 aa22.62■■□□□ 1.21
ITGA4-202ENST00000339307 PTH1RQ03431 593 aa22.62■■□□□ 1.21
ITGA4-202ENST00000339307 RASIP1Q5U651 963 aa22.62■■□□□ 1.21
ITGA4-202ENST00000339307 HOMER1Q86YM7 354 aa22.62■■□□□ 1.21
ITGA4-202ENST00000339307 MYH6P13533 1939 aa22.61■■□□□ 1.21
ITGA4-202ENST00000339307 GH1P01241 217 aa22.61■■□□□ 1.21
ITGA4-202ENST00000339307 SEC23AQ15436 765 aa22.61■■□□□ 1.21
ITGA4-202ENST00000339307 RAB30Q15771 203 aa22.61■■□□□ 1.21
ITGA4-202ENST00000339307 RETREG2Q8NC44 543 aa22.61■■□□□ 1.21
ITGA4-202ENST00000339307 AFG1LQ8WV93 481 aa22.61■■□□□ 1.21
ITGA4-202ENST00000339307 IWS1Q96ST2 819 aa22.61■■□□□ 1.21
ITGA4-202ENST00000339307 CYP21A2P08686 494 aa22.6■■□□□ 1.21
ITGA4-202ENST00000339307 MYCLP12524 364 aaPredicted RBP22.6■■□□□ 1.21
ITGA4-202ENST00000339307 PPM1EQ8WY54 764 aa22.6■■□□□ 1.21
ITGA4-202ENST00000339307 GAS2L1Q99501 681 aaPredicted RBP22.6■■□□□ 1.21
ITGA4-202ENST00000339307 MAF1Q9H063 256 aa22.6■■□□□ 1.21
ITGA4-202ENST00000339307 NKX2-4Q9H2Z4 354 aa22.6■■□□□ 1.21
ITGA4-202ENST00000339307 MAD2L2Q9UI95 211 aa22.6■■□□□ 1.21
ITGA4-202ENST00000339307 PCDHA1Q9Y5I3 950 aa22.6■■□□□ 1.21
ITGA4-202ENST00000339307 SLC4A7Q9Y6M7 1214 aa22.6■■□□□ 1.21
ITGA4-202ENST00000339307 ZBTB5O15062 677 aa22.59■■□□□ 1.21
ITGA4-202ENST00000339307 NFRKBQ6P4R8 1299 aa22.59■■□□□ 1.21
ITGA4-202ENST00000339307 PRDM12Q9H4Q4 367 aa22.59■■□□□ 1.21
ITGA4-202ENST00000339307 MRVI1Q9Y6F6 885 aa22.59■■□□□ 1.21
ITGA4-202ENST00000339307 NR3C2P08235 984 aa22.58■■□□□ 1.21
ITGA4-202ENST00000339307 WTAPQ15007 396 aa22.58■■□□□ 1.21
ITGA4-202ENST00000339307 SART3Q15020 963 aaKnown RBP22.58■■□□□ 1.21
ITGA4-202ENST00000339307 CCDC62Q6P9F0 684 aa22.58■■□□□ 1.21
ITGA4-202ENST00000339307 NCOA7Q8NI08 942 aa22.58■■□□□ 1.21
ITGA4-202ENST00000339307 COL25A1Q9BXS0 654 aaPredicted RBP22.58■■□□□ 1.21
ITGA4-202ENST00000339307 FTOQ9C0B1 505 aaKnown RBP eCLIP22.58■■□□□ 1.21
ITGA4-202ENST00000339307 SLC28A3Q9HAS3 691 aa22.58■■□□□ 1.21
ITGA4-202ENST00000339307 PXMP2Q9NR77 195 aa22.58■■□□□ 1.21
ITGA4-202ENST00000339307 EIF3JO75822 258 aaKnown RBP22.57■■□□□ 1.2
ITGA4-202ENST00000339307 MMP3P08254 477 aa22.57■■□□□ 1.2
ITGA4-202ENST00000339307 CASTP20810 708 aaKnown RBP22.57■■□□□ 1.2
ITGA4-202ENST00000339307 HOXA13P31271 388 aaPredicted RBP22.57■■□□□ 1.2
ITGA4-202ENST00000339307 RABGGTBP53611 331 aa22.57■■□□□ 1.2
ITGA4-202ENST00000339307 PIBF1Q8WXW3 757 aa22.57■■□□□ 1.2
ITGA4-202ENST00000339307 PALM3A6NDB9 673 aaPredicted RBP22.57■■□□□ 1.2
ITGA4-202ENST00000339307 E7EWF7 191 aa22.57■■□□□ 1.2
ITGA4-202ENST00000339307 SORBS3O60504 671 aa22.57■■□□□ 1.2
ITGA4-202ENST00000339307 ARHGAP1Q07960 439 aa22.57■■□□□ 1.2
ITGA4-202ENST00000339307 PTGISQ16647 500 aa22.57■■□□□ 1.2
ITGA4-202ENST00000339307 PIGSQ96S52 555 aa22.57■■□□□ 1.2
ITGA4-202ENST00000339307 PPP1R11O60927 126 aaPredicted RBP22.56■■□□□ 1.2
ITGA4-202ENST00000339307 PFKMP08237 780 aa22.56■■□□□ 1.2
ITGA4-202ENST00000339307 ACTN1P12814 892 aa22.56■■□□□ 1.2
ITGA4-202ENST00000339307 IGFBP4P22692 258 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 163.8 ms