RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 NOSTRINQ8IVI9 506 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 KCNG4Q8TDN1 519 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 FAM167AQ96KS9 214 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 TCEANC2Q96MN5 208 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 RIT2Q99578 217 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 JPH2Q9BR39 696 aaPredicted RBP5.88□□□□□ -1.47
LRIT3-201ENST00000327908 SDF4Q9BRK5 362 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 MYL10Q9BUA6 226 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 MAGEF1Q9HAY2 307 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 POLR3EQ9NVU0 708 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 CYP39A1Q9NYL5 469 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 FAM184BQ9ULE4 1060 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 ZNF536O15090 1300 aa5.88□□□□□ -1.47
LRIT3-201ENST00000327908 GOLGA8HP0CJ92 632 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 ZSCAN22P10073 491 aaPredicted RBP5.87□□□□□ -1.47
LRIT3-201ENST00000327908 CPA1P15085 419 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 SLC16A2P36021 539 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 SLC26A2P50443 739 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 KRT85P78386 507 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 KRT76Q01546 638 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 ZNF792Q3KQV3 632 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 Q4G0T1 1027 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 CLEC10AQ8IUN9 316 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 DIS3L2Q8IYB7 885 aaKnown RBP5.87□□□□□ -1.47
LRIT3-201ENST00000327908 ANKLE1Q8NAG6 615 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 SYTL5Q8TDW5 730 aaPredicted RBP5.87□□□□□ -1.47
LRIT3-201ENST00000327908 CNKSR2Q8WXI2 1034 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 CLEC4DQ8WXI8 215 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 PTPN18Q99952 460 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 KATNAL1Q9BW62 490 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 HOOK1Q9UJC3 728 aaKnown RBP5.87□□□□□ -1.47
LRIT3-201ENST00000327908 PCDHA6Q9UN73 950 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 PCDHA8Q9Y5H6 950 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 KDM3AQ9Y4C1 1321 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 RBM47A0AV96 593 aaKnown RBP5.87□□□□□ -1.47
LRIT3-201ENST00000327908 AOC2O75106 756 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 CFBP00751 764 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 EDNRBP24530 442 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 CLK2P49760 499 aaKnown RBP5.87□□□□□ -1.47
LRIT3-201ENST00000327908 ALDH5A1P51649 535 aaPredicted RBP5.87□□□□□ -1.47
LRIT3-201ENST00000327908 PKN1Q16512 942 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 FAM160B1Q5W0V3 765 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 CCDC144CPQ8IYA2 1237 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 USP6NLQ92738 828 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 RMDN3Q96TC7 470 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 ANP32EQ9BTT0 268 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 AP5M1Q9H0R1 490 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 PXMP2Q9NR77 195 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 FBXO28Q9NVF7 368 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 BTBD7Q9P203 1132 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 CPA4Q9UI42 421 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 RLFQ13129 1914 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 CYTH3O43739 400 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 TRPA1O75762 1119 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 GRM1Q13255 1194 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 LAMC2Q13753 1193 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 HAUS3Q68CZ6 603 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 NOL8Q76FK4 1167 aaKnown RBP5.87□□□□□ -1.47
LRIT3-201ENST00000327908 SMAP1Q8IYB5 467 aaPredicted RBP5.87□□□□□ -1.47
LRIT3-201ENST00000327908 NECAB1Q8N987 351 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 MBOAT7Q96N66 472 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 TSEN34Q9BSV6 310 aaKnown RBP5.87□□□□□ -1.47
LRIT3-201ENST00000327908 NCOA5Q9HCD5 579 aaKnown RBP5.87□□□□□ -1.47
LRIT3-201ENST00000327908 A1CFQ9NQ94 594 aaKnown RBP5.87□□□□□ -1.47
LRIT3-201ENST00000327908 SCAF8Q9UPN6 1271 aaKnown RBP5.87□□□□□ -1.47
LRIT3-201ENST00000327908 PLXNB2O15031 1838 aa5.87□□□□□ -1.47
LRIT3-201ENST00000327908 VPS37CA5D8V6 355 aaPredicted RBP5.86□□□□□ -1.47
LRIT3-201ENST00000327908 HSPA8P11142 646 aaKnown RBP5.86□□□□□ -1.47
LRIT3-201ENST00000327908 AKR1A1P14550 325 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 ADORA2AP29274 412 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 NKX3-2P78367 333 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 EVX2Q03828 476 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 PTPN11Q06124 597 aaPredicted RBP5.86□□□□□ -1.47
LRIT3-201ENST00000327908 MKRN3Q13064 507 aaKnown RBP5.86□□□□□ -1.47
LRIT3-201ENST00000327908 BAATQ14032 418 aaPredicted RBP5.86□□□□□ -1.47
LRIT3-201ENST00000327908 USH1GQ495M9 461 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 ARRDC4Q8NCT1 418 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 EMID1Q96A84 441 aaPredicted RBP5.86□□□□□ -1.47
LRIT3-201ENST00000327908 TIPINQ9BVW5 301 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 TEKT3Q9BXF9 490 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 JADE2Q9NQC1 790 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 GPHNQ9NQX3 736 aaPredicted RBP5.86□□□□□ -1.47
LRIT3-201ENST00000327908 GH1P01241 217 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 RPS6P62753 249 aaKnown RBP5.86□□□□□ -1.47
LRIT3-201ENST00000327908 ARHGAP4P98171 946 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 KIAA1755Q5JYT7 1200 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 TTC38Q5R3I4 469 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 MCTP1Q6DN14 999 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 ZNF746Q6NUN9 644 aaPredicted RBP5.86□□□□□ -1.47
LRIT3-201ENST00000327908 CCDC84Q86UT8 332 aaPredicted RBP5.86□□□□□ -1.47
LRIT3-201ENST00000327908 PCSK9Q8NBP7 692 aaKnown RBP5.86□□□□□ -1.47
LRIT3-201ENST00000327908 PHKBQ93100 1093 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 CCDC47Q96A33 483 aaKnown RBP5.86□□□□□ -1.47
LRIT3-201ENST00000327908 AGBL1Q96MI9 1066 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 MXRA8Q9BRK3 442 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 PDCD2LQ9BRP1 358 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 TINF2Q9BSI4 451 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 CUEDC2Q9H467 287 aa5.86□□□□□ -1.47
LRIT3-201ENST00000327908 RNF216Q9NWF9 866 aaPredicted RBP5.86□□□□□ -1.47
LRIT3-201ENST00000327908 UBIAD1Q9Y5Z9 338 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms