RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 NEK9Q8TD19 979 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 DSCC1Q9BVC3 393 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 KDM5BQ9UGL1 1544 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 PFKFB2O60825 505 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 P4HA1P13674 534 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 SEPT2Q15019 361 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 RINT1Q6NUQ1 792 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 RFX6Q8HWS3 928 aa16.12■□□□□ 0.17
SCN3B-201ENST00000299333 ZNF532Q9HCE3 1301 aa16.11■□□□□ 0.17
SCN3B-201ENST00000299333 ZFYVE9O95405 1425 aa16.11■□□□□ 0.17
SCN3B-201ENST00000299333 NSFP46459 744 aaKnown RBP16.11■□□□□ 0.17
SCN3B-201ENST00000299333 FBXO31Q5XUX0 539 aaPredicted RBP16.11■□□□□ 0.17
SCN3B-201ENST00000299333 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.11■□□□□ 0.17
SCN3B-201ENST00000299333 KDRP35968 1356 aa16.11■□□□□ 0.17
SCN3B-201ENST00000299333 IBTKQ9P2D0 1353 aaPredicted RBP16.11■□□□□ 0.17
SCN3B-201ENST00000299333 PSMD7P51665 324 aa16.11■□□□□ 0.17
SCN3B-201ENST00000299333 FAM102BQ5T8I3 360 aa16.11■□□□□ 0.17
SCN3B-201ENST00000299333 MAP7D3Q8IWC1 876 aa16.11■□□□□ 0.17
SCN3B-201ENST00000299333 SERPINI1Q99574 410 aa16.11■□□□□ 0.17
SCN3B-201ENST00000299333 LZTS2Q9BRK4 669 aa16.11■□□□□ 0.17
SCN3B-201ENST00000299333 MRPS25P82663 173 aaKnown RBP16.11■□□□□ 0.17
SCN3B-201ENST00000299333 ZNF654Q8IZM8 581 aa16.11■□□□□ 0.17
SCN3B-201ENST00000299333 WARS2Q9UGM6 360 aaKnown RBP16.11■□□□□ 0.17
SCN3B-201ENST00000299333 ZMYM4Q5VZL5 1548 aa16.11■□□□□ 0.17
SCN3B-201ENST00000299333 CHGBP05060 677 aa16.11■□□□□ 0.17
SCN3B-201ENST00000299333 TRIP13Q15645 432 aaPredicted RBP16.11■□□□□ 0.17
SCN3B-201ENST00000299333 OSBPL1AQ9BXW6 950 aa16.11■□□□□ 0.17
SCN3B-201ENST00000299333 NFU1Q9UMS0 254 aa16.11■□□□□ 0.17
SCN3B-201ENST00000299333 N4BP1O75113 896 aaKnown RBP16.1■□□□□ 0.17
SCN3B-201ENST00000299333 ADD1P35611 737 aaKnown RBP16.1■□□□□ 0.17
SCN3B-201ENST00000299333 SMYD4Q8IYR2 804 aaPredicted RBP16.1■□□□□ 0.17
SCN3B-201ENST00000299333 EDC3Q96F86 508 aaKnown RBP16.1■□□□□ 0.17
SCN3B-201ENST00000299333 UBAP1Q9NZ09 502 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 DLATP10515 647 aaKnown RBP16.1■□□□□ 0.17
SCN3B-201ENST00000299333 ZAP70P43403 619 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 TPTE2Q6XPS3 522 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 BLIDQ8IZY5 108 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 CHMP6Q96FZ7 201 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 SH3GL2Q99962 352 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 ZMYND12Q9H0C1 365 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 EXOC1LA0A1B0GW35 172 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 BTBD18B2RXH4 712 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 MYO1FO00160 1098 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 LMNB1P20700 586 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 MRPS15P82914 257 aaKnown RBP16.1■□□□□ 0.17
SCN3B-201ENST00000299333 CAPRIN2Q6IMN6 1127 aaKnown RBP16.1■□□□□ 0.17
SCN3B-201ENST00000299333 WDR75Q8IWA0 830 aaKnown RBP16.1■□□□□ 0.17
SCN3B-201ENST00000299333 DDX28Q9NUL7 540 aaKnown RBP16.1■□□□□ 0.17
SCN3B-201ENST00000299333 PLAAQ9Y263 795 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 NBPF9Q3BBW0 867 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 MYLK4Q86YV6 388 aaPredicted RBP16.1■□□□□ 0.17
SCN3B-201ENST00000299333 SYT2Q8N9I0 419 aaPredicted RBP16.1■□□□□ 0.17
SCN3B-201ENST00000299333 ARHGEF10LQ9HCE6 1279 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 K7ENM7 598 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 CAPN9O14815 690 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 GYG2O15488 501 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 MMEP08473 750 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 C4orf50Q6ZRC1 276 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 TESK2Q96S53 571 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 AP1M1Q9BXS5 423 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 ZSWIM6Q9HCJ5 1215 aa16.1■□□□□ 0.17
SCN3B-201ENST00000299333 SKA2Q8WVK7 121 aaPredicted RBP16.09■□□□□ 0.17
SCN3B-201ENST00000299333 CCDC127Q96BQ5 260 aa16.09■□□□□ 0.17
SCN3B-201ENST00000299333 GIMAP4Q9NUV9 329 aa16.09■□□□□ 0.17
SCN3B-201ENST00000299333 FANCAO15360 1455 aa16.09■□□□□ 0.17
SCN3B-201ENST00000299333 A0A0G2JND7 137 aa16.09■□□□□ 0.17
SCN3B-201ENST00000299333 CPP00450 1065 aa16.09■□□□□ 0.17
SCN3B-201ENST00000299333 MYO1EQ12965 1108 aa16.09■□□□□ 0.17
SCN3B-201ENST00000299333 ATG16L1Q676U5 607 aa16.09■□□□□ 0.17
SCN3B-201ENST00000299333 RAB44Q7Z6P3 723 aaPredicted RBP16.09■□□□□ 0.17
SCN3B-201ENST00000299333 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.09■□□□□ 0.17
SCN3B-201ENST00000299333 SUCLG2Q96I99 432 aa16.09■□□□□ 0.17
SCN3B-201ENST00000299333 FMO2Q99518 471 aa16.09■□□□□ 0.17
SCN3B-201ENST00000299333 PITPNM3Q9BZ71 974 aa16.09■□□□□ 0.17
SCN3B-201ENST00000299333 CA4P22748 312 aa16.09■□□□□ 0.17
SCN3B-201ENST00000299333 HIBADHP31937 336 aaKnown RBP16.09■□□□□ 0.17
SCN3B-201ENST00000299333 TFAP4Q01664 338 aa16.09■□□□□ 0.17
SCN3B-201ENST00000299333 PDZD4Q76G19 769 aaPredicted RBP16.09■□□□□ 0.17
SCN3B-201ENST00000299333 CXorf56Q9H5V9 222 aa16.09■□□□□ 0.17
SCN3B-201ENST00000299333 METTL14Q9HCE5 456 aaKnown RBP16.09■□□□□ 0.17
SCN3B-201ENST00000299333 DEUP1Q05D60 604 aa16.09■□□□□ 0.17
SCN3B-201ENST00000299333 DDX17Q92841 729 aaKnown RBP16.09■□□□□ 0.17
SCN3B-201ENST00000299333 AZI2Q9H6S1 392 aa16.09■□□□□ 0.17
SCN3B-201ENST00000299333 FGFR1OP2Q9NVK5 253 aa16.09■□□□□ 0.17
SCN3B-201ENST00000299333 SYNJ2BP-COX16A0A087WUM0 186 aa16.08■□□□□ 0.17
SCN3B-201ENST00000299333 IKBKBO14920 756 aa16.08■□□□□ 0.17
SCN3B-201ENST00000299333 GAS7O60861 476 aa16.08■□□□□ 0.17
SCN3B-201ENST00000299333 TRIM55Q9BYV6 548 aa16.08■□□□□ 0.17
SCN3B-201ENST00000299333 COX16Q9P0S2 106 aa16.08■□□□□ 0.17
SCN3B-201ENST00000299333 MAGED2Q9UNF1 606 aaPredicted RBP16.08■□□□□ 0.17
SCN3B-201ENST00000299333 NVLO15381 856 aaKnown RBP16.08■□□□□ 0.17
SCN3B-201ENST00000299333 DCTN3O75935 186 aa16.08■□□□□ 0.17
SCN3B-201ENST00000299333 KRT14P02533 472 aa16.08■□□□□ 0.17
SCN3B-201ENST00000299333 SLFN14P0C7P3 912 aa16.08■□□□□ 0.17
SCN3B-201ENST00000299333 PLS3P13797 630 aa16.08■□□□□ 0.17
SCN3B-201ENST00000299333 EIF3BP55884 814 aaKnown RBP16.08■□□□□ 0.17
SCN3B-201ENST00000299333 FOXD4Q12950 439 aaPredicted RBP16.08■□□□□ 0.17
SCN3B-201ENST00000299333 PARP9Q8IXQ6 854 aa16.08■□□□□ 0.17
SCN3B-201ENST00000299333 CPXCR1Q8N123 301 aa16.08■□□□□ 0.17
SCN3B-201ENST00000299333 TTLL11Q8NHH1 800 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms