RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 ARHGEF16Q5VV41 709 aa17.2■□□□□ 0.34
RPA3-201ENST00000223129 FBXO46Q6PJ61 603 aaPredicted RBP17.2■□□□□ 0.34
RPA3-201ENST00000223129 BLIDQ8IZY5 108 aa17.2■□□□□ 0.34
RPA3-201ENST00000223129 DNERQ8NFT8 737 aa17.2■□□□□ 0.34
RPA3-201ENST00000223129 OXER1Q8TDS5 423 aa17.2■□□□□ 0.34
RPA3-201ENST00000223129 SH3TC2Q8TF17 1288 aa17.2■□□□□ 0.34
RPA3-201ENST00000223129 TINF2Q9BSI4 451 aa17.2■□□□□ 0.34
RPA3-201ENST00000223129 PXMP2Q9NR77 195 aa17.2■□□□□ 0.34
RPA3-201ENST00000223129 PCDHA6Q9UN73 950 aa17.2■□□□□ 0.34
RPA3-201ENST00000223129 PCDHA8Q9Y5H6 950 aa17.2■□□□□ 0.34
RPA3-201ENST00000223129 GRK4P32298 578 aa17.19■□□□□ 0.34
RPA3-201ENST00000223129 OLFML2BQ68BL8 750 aa17.19■□□□□ 0.34
RPA3-201ENST00000223129 ZNF467Q7Z7K2 595 aaPredicted RBP17.19■□□□□ 0.34
RPA3-201ENST00000223129 REXO1Q8N1G1 1221 aaKnown RBP17.19■□□□□ 0.34
RPA3-201ENST00000223129 PXYLP1Q8TE99 480 aa17.19■□□□□ 0.34
RPA3-201ENST00000223129 NSUN6Q8TEA1 469 aaKnown RBP17.19■□□□□ 0.34
RPA3-201ENST00000223129 ZFP91Q96JP5 570 aaPredicted RBP17.19■□□□□ 0.34
RPA3-201ENST00000223129 GLT8D2Q9H1C3 349 aa17.19■□□□□ 0.34
RPA3-201ENST00000223129 MCM3APO60318 1980 aa17.19■□□□□ 0.34
RPA3-201ENST00000223129 SPDYE3A6NKU9 549 aa17.18■□□□□ 0.34
RPA3-201ENST00000223129 BECN1Q14457 450 aa17.18■□□□□ 0.34
RPA3-201ENST00000223129 PKN2Q16513 984 aaKnown RBP17.18■□□□□ 0.34
RPA3-201ENST00000223129 PRAMEF19Q5SWL8 479 aa17.18■□□□□ 0.34
RPA3-201ENST00000223129 ARMCX2Q7L311 632 aa17.18■□□□□ 0.34
RPA3-201ENST00000223129 FBXO18Q8NFZ0 1043 aa17.18■□□□□ 0.34
RPA3-201ENST00000223129 BICD2Q8TD16 824 aa17.18■□□□□ 0.34
RPA3-201ENST00000223129 SNAI1O95863 264 aaPredicted RBP17.18■□□□□ 0.34
RPA3-201ENST00000223129 IGHA2P01877 340 aa17.18■□□□□ 0.34
RPA3-201ENST00000223129 MMP1P03956 469 aa17.18■□□□□ 0.34
RPA3-201ENST00000223129 MAMDC4Q6UXC1 1216 aa17.18■□□□□ 0.34
RPA3-201ENST00000223129 DAGLBQ8NCG7 672 aa17.18■□□□□ 0.34
RPA3-201ENST00000223129 SLAIN1Q8ND83 568 aa17.18■□□□□ 0.34
RPA3-201ENST00000223129 IL31RAQ8NI17 732 aa17.18■□□□□ 0.34
RPA3-201ENST00000223129 MCOLN1Q9GZU1 580 aa17.18■□□□□ 0.34
RPA3-201ENST00000223129 KIF3AQ9Y496 699 aa17.18■□□□□ 0.34
RPA3-201ENST00000223129 M0R2N6 131 aa17.17■□□□□ 0.34
RPA3-201ENST00000223129 NR5A1Q13285 461 aa17.17■□□□□ 0.34
RPA3-201ENST00000223129 PGM5Q15124 567 aa17.17■□□□□ 0.34
RPA3-201ENST00000223129 SLC9C1Q4G0N8 1177 aa17.17■□□□□ 0.34
RPA3-201ENST00000223129 COL13A1Q5TAT6 717 aaPredicted RBP17.17■□□□□ 0.34
RPA3-201ENST00000223129 LARP1BQ659C4 914 aaKnown RBP17.17■□□□□ 0.34
RPA3-201ENST00000223129 GALNT17Q6IS24 598 aa17.17■□□□□ 0.34
RPA3-201ENST00000223129 EEPD1Q7L9B9 569 aa17.17■□□□□ 0.34
RPA3-201ENST00000223129 FAM177A1Q8N128 213 aaPredicted RBP17.17■□□□□ 0.34
RPA3-201ENST00000223129 PDCD2LQ9BRP1 358 aa17.17■□□□□ 0.34
RPA3-201ENST00000223129 ANO3Q9BYT9 981 aa17.17■□□□□ 0.34
RPA3-201ENST00000223129 ASB14A6NK59 587 aa17.16■□□□□ 0.34
RPA3-201ENST00000223129 BTBD18B2RXH4 712 aa17.16■□□□□ 0.34
RPA3-201ENST00000223129 NR3C2P08235 984 aa17.16■□□□□ 0.34
RPA3-201ENST00000223129 MYCLP12524 364 aaPredicted RBP17.16■□□□□ 0.34
RPA3-201ENST00000223129 TRMT44Q8IYL2 757 aaKnown RBP17.16■□□□□ 0.34
RPA3-201ENST00000223129 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.16■□□□□ 0.34
RPA3-201ENST00000223129 RPTORQ8N122 1335 aa17.16■□□□□ 0.34
RPA3-201ENST00000223129 FOSP01100 380 aaPredicted RBP17.16■□□□□ 0.34
RPA3-201ENST00000223129 MYCP01106 439 aaPredicted RBP17.16■□□□□ 0.34
RPA3-201ENST00000223129 HMGCRP04035 888 aa17.16■□□□□ 0.34
RPA3-201ENST00000223129 INHAP05111 366 aa17.16■□□□□ 0.34
RPA3-201ENST00000223129 EDNRBP24530 442 aa17.16■□□□□ 0.34
RPA3-201ENST00000223129 KRT2P35908 639 aa17.16■□□□□ 0.34
RPA3-201ENST00000223129 CACNB2Q08289 660 aaPredicted RBP17.16■□□□□ 0.34
RPA3-201ENST00000223129 PDE4DQ08499 809 aa17.16■□□□□ 0.34
RPA3-201ENST00000223129 AP3B2Q13367 1082 aa17.16■□□□□ 0.34
RPA3-201ENST00000223129 MFSD14CQ5VZR4 134 aa17.16■□□□□ 0.34
RPA3-201ENST00000223129 DIS3L2Q8IYB7 885 aaKnown RBP17.16■□□□□ 0.34
RPA3-201ENST00000223129 BRCA2P51587 3418 aa17.15■□□□□ 0.34
RPA3-201ENST00000223129 SYNGAP1Q96PV0 1343 aa17.15■□□□□ 0.34
RPA3-201ENST00000223129 EARS2Q5JPH6 523 aaKnown RBP17.15■□□□□ 0.34
RPA3-201ENST00000223129 MSL3Q8N5Y2 521 aaKnown RBP17.15■□□□□ 0.34
RPA3-201ENST00000223129 MORC4Q8TE76 937 aa17.15■□□□□ 0.34
RPA3-201ENST00000223129 IWS1Q96ST2 819 aa17.15■□□□□ 0.34
RPA3-201ENST00000223129 FRMPD4Q14CM0 1322 aa17.15■□□□□ 0.34
RPA3-201ENST00000223129 PRKAR2AP13861 404 aaKnown RBP17.14■□□□□ 0.34
RPA3-201ENST00000223129 TEX2Q8IWB9 1127 aa17.14■□□□□ 0.34
RPA3-201ENST00000223129 TRPV1Q8NER1 839 aa17.14■□□□□ 0.34
RPA3-201ENST00000223129 BRMS1Q9HCU9 246 aa17.14■□□□□ 0.34
RPA3-201ENST00000223129 H3BQV1 296 aa17.14■□□□□ 0.33
RPA3-201ENST00000223129 ANP32AP39687 249 aaKnown RBP17.14■□□□□ 0.33
RPA3-201ENST00000223129 MRPS9P82933 396 aaKnown RBP17.14■□□□□ 0.33
RPA3-201ENST00000223129 SAFBQ15424 915 aaKnown RBP eCLIP17.14■□□□□ 0.33
RPA3-201ENST00000223129 STXBP2Q15833 593 aa17.14■□□□□ 0.33
RPA3-201ENST00000223129 IFFO2Q5TF58 517 aa17.14■□□□□ 0.33
RPA3-201ENST00000223129 VSIG10LQ86VR7 867 aa17.14■□□□□ 0.33
RPA3-201ENST00000223129 FBXO16Q8IX29 292 aaPredicted RBP17.14■□□□□ 0.33
RPA3-201ENST00000223129 MPHOSPH6Q99547 160 aaKnown RBP17.14■□□□□ 0.33
RPA3-201ENST00000223129 KATNBL1Q9H079 304 aa17.14■□□□□ 0.33
RPA3-201ENST00000223129 RTEL1Q9NZ71 1219 aa17.14■□□□□ 0.33
RPA3-201ENST00000223129 FAM205CA6NFA0 338 aa17.13■□□□□ 0.33
RPA3-201ENST00000223129 B4DLN1 442 aa17.13■□□□□ 0.33
RPA3-201ENST00000223129 SYT1P21579 422 aa17.13■□□□□ 0.33
RPA3-201ENST00000223129 CCND3P30281 292 aaPredicted RBP17.13■□□□□ 0.33
RPA3-201ENST00000223129 ACVR2BQ13705 512 aa17.13■□□□□ 0.33
RPA3-201ENST00000223129 PIK3AP1Q6ZUJ8 805 aa17.13■□□□□ 0.33
RPA3-201ENST00000223129 TNFRSF25Q93038 417 aa17.13■□□□□ 0.33
RPA3-201ENST00000223129 PDGFCQ9NRA1 345 aa17.13■□□□□ 0.33
RPA3-201ENST00000223129 ZHX1Q9UKY1 873 aaPredicted RBP17.13■□□□□ 0.33
RPA3-201ENST00000223129 CNPY2Q9Y2B0 182 aa17.13■□□□□ 0.33
RPA3-201ENST00000223129 LOC102724159A0A0B4J2E5 919 aa17.13■□□□□ 0.33
RPA3-201ENST00000223129 KIF28PB7ZC32 967 aa17.13■□□□□ 0.33
RPA3-201ENST00000223129 CCND2P30279 289 aa17.13■□□□□ 0.33
RPA3-201ENST00000223129 SREBF1P36956 1147 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms