RNA–Protein interactions for RNA: ENST00000209875.8

CBX5-201, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 11,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-201ENST00000209875 SCINQ9Y6U3 715 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 LOC102724428A0A0B4J2F2 783 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 DNA2P51530 1060 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 SIK1P57059 783 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 KIF23Q02241 960 aaPredicted RBP6.3□□□□□ -1.4
CBX5-201ENST00000209875 ITIH3Q06033 890 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 ENOSF1Q7L5Y1 443 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 SGMS1Q86VZ5 419 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 STAG1Q8WVM7 1258 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 FAM20AQ96MK3 541 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 CROCC2H7BZ55 1655 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 MMP1P03956 469 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 PTK2Q05397 1052 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 RSPH3Q86UC2 560 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 RASEFQ8IZ41 740 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 CAPS2Q9BXY5 557 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 LGR6Q9HBX8 967 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 BIN2Q9UBW5 565 aaPredicted RBP6.3□□□□□ -1.4
CBX5-201ENST00000209875 NCKAP5LQ9HCH0 1330 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 ABCA9Q8IUA7 1624 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 RIOK3O14730 519 aaKnown RBP6.3□□□□□ -1.4
CBX5-201ENST00000209875 ICA1Q05084 483 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 DCAF17Q5H9S7 520 aaPredicted RBP6.3□□□□□ -1.4
CBX5-201ENST00000209875 SLC27A3Q5K4L6 730 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 NSUN7Q8NE18 718 aaKnown RBP6.3□□□□□ -1.4
CBX5-201ENST00000209875 HESX1Q9UBX0 185 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 AGTPBP1Q9UPW5 1226 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 CSADQ9Y600 493 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 E7EVH7 732 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 MYCT1Q8N699 235 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 USP28Q96RU2 1077 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 ORAI2Q96SN7 254 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 KIF2CQ99661 725 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 MRPL44Q9H9J2 332 aaKnown RBP6.3□□□□□ -1.4
CBX5-201ENST00000209875 ATP8B3O60423 1300 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 SH2B2O14492 632 aaPredicted RBP6.3□□□□□ -1.4
CBX5-201ENST00000209875 HOXC6P09630 235 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 RFC1P35251 1148 aaPredicted RBP6.3□□□□□ -1.4
CBX5-201ENST00000209875 NECTIN1Q15223 517 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 IFT81Q8WYA0 676 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 TRIM62Q9BVG3 475 aa6.3□□□□□ -1.4
CBX5-201ENST00000209875 LTKP29376 864 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 PSMC2P35998 433 aaKnown RBP6.29□□□□□ -1.4
CBX5-201ENST00000209875 LRRC8AQ8IWT6 810 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 P2RX5Q93086 422 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 PPP2R2CQ9Y2T4 447 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 A0A087WUV0 522 aaPredicted RBP6.29□□□□□ -1.4
CBX5-201ENST00000209875 RHOXF2BP0C7M4 288 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 MUM1L1Q5H9M0 696 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 CACTINQ8WUQ7 758 aaKnown RBP6.29□□□□□ -1.4
CBX5-201ENST00000209875 KIFC2Q96AC6 838 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 RHOXF2Q9BQY4 288 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 FAM8A1Q9UBU6 413 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 EPN1Q9Y6I3 576 aaPredicted RBP6.29□□□□□ -1.4
CBX5-201ENST00000209875 ROBO2Q9HCK4 1378 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 USP17L12C9JPN9 530 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 USP17L21D6R901 530 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 RPN1P04843 607 aaKnown RBP6.29□□□□□ -1.4
CBX5-201ENST00000209875 SRGAP2BP0DMP2 458 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 GARSP41250 739 aaKnown RBP6.29□□□□□ -1.4
CBX5-201ENST00000209875 APLFQ8IW19 511 aaPredicted RBP6.29□□□□□ -1.4
CBX5-201ENST00000209875 XPO4Q9C0E2 1151 aaKnown RBP6.29□□□□□ -1.4
CBX5-201ENST00000209875 KCNK9Q9NPC2 374 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 DBNLQ9UJU6 430 aaKnown RBP6.29□□□□□ -1.4
CBX5-201ENST00000209875 A0A1W2PQC6 194 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 MED7O43513 233 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 LMNAP02545 664 aaKnown RBP6.29□□□□□ -1.4
CBX5-201ENST00000209875 ZSCAN20P17040 1043 aaPredicted RBP6.29□□□□□ -1.4
CBX5-201ENST00000209875 ELMSAN1Q6PJG2 1045 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 TTC13Q8NBP0 860 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 ARHGEF2Q92974 986 aaKnown RBP6.29□□□□□ -1.4
CBX5-201ENST00000209875 C8orf37Q96NL8 207 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 FOXP3Q9BZS1 431 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 PFASO15067 1338 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 ZCCHC11Q5TAX3 1644 aaKnown RBP6.29□□□□□ -1.4
CBX5-201ENST00000209875 SPATA31A3Q5VYP0 1347 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 NSFP46459 744 aaKnown RBP6.29□□□□□ -1.4
CBX5-201ENST00000209875 YARSP54577 528 aaKnown RBP6.29□□□□□ -1.4
CBX5-201ENST00000209875 CHRNDQ07001 517 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 DMP1Q13316 513 aaPredicted RBP6.29□□□□□ -1.4
CBX5-201ENST00000209875 DYNC1I2Q13409 638 aaKnown RBP6.29□□□□□ -1.4
CBX5-201ENST00000209875 GRAPQ13588 217 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 HHATQ5VTY9 493 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 XRRA1Q6P2D8 792 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 NBPF10Q6P3W6 841 aaKnown RBP6.29□□□□□ -1.4
CBX5-201ENST00000209875 FAM178BQ8IXR5 827 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 GRAPLQ8TC17 118 aaPredicted RBP6.29□□□□□ -1.4
CBX5-201ENST00000209875 ACCSQ96QU6 501 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 TBC1D22BQ9NU19 505 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 SERTAD1Q9UHV2 236 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 FBXO41Q8TF61 875 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 EPSTI1Q96J88 318 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 PPP1R9AQ9ULJ8 1098 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 PALLDQ8WX93 1383 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 COPB1P53618 953 aaKnown RBP6.29□□□□□ -1.4
CBX5-201ENST00000209875 SND1Q7KZF4 910 aaKnown RBP eCLIP6.29□□□□□ -1.49e-9■■■□□ 17.9
CBX5-201ENST00000209875 NRXN1Q9ULB1 1477 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 STX17P56962 302 aa6.29□□□□□ -1.4
CBX5-201ENST00000209875 CERKLQ49MI3 558 aaPredicted RBP6.29□□□□□ -1.4
CBX5-201ENST00000209875 SLFN13Q68D06 897 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms