RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Plcd1Q8R3B1 756 aa17.72■□□□□ 0.43
Hmgb1-208ENSMUST00000139443 Alas1Q8VC19 642 aa17.72■□□□□ 0.43
Hmgb1-208ENSMUST00000139443 Q9D9S1 216 aa17.72■□□□□ 0.43
Hmgb1-208ENSMUST00000139443 Trim12cD3Z3L3 497 aa17.71■□□□□ 0.43
Hmgb1-208ENSMUST00000139443 Col6a1Q04857 1025 aa17.71■□□□□ 0.43
Hmgb1-208ENSMUST00000139443 Dll1Q61483 722 aa17.71■□□□□ 0.43
Hmgb1-208ENSMUST00000139443 Tmem59lQ7TNI2 337 aa17.71■□□□□ 0.43
Hmgb1-208ENSMUST00000139443 Atg4cQ811C2 458 aa17.71■□□□□ 0.43
Hmgb1-208ENSMUST00000139443 Lmcd1Q8VEE1 365 aa17.71■□□□□ 0.43
Hmgb1-208ENSMUST00000139443 Havcr2Q8VIM0 281 aa17.71■□□□□ 0.43
Hmgb1-208ENSMUST00000139443 Galk1Q9R0N0 392 aa17.71■□□□□ 0.43
Hmgb1-208ENSMUST00000139443 Ttc6G3UYY4 1857 aa17.7■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Pabpc1lA2A5N3 607 aaKnown RBP17.7■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Oip5A2AQ14 241 aa17.7■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Nedd1P33215 660 aa17.7■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Tdo2P48776 406 aa17.7■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Kcna2P63141 499 aa17.7■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Gjb2Q00977 226 aa17.7■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Ckap2Q3V1H1 664 aa17.7■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Fam109aQ8BH49 266 aa17.7■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Q8K2W9 541 aa17.7■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Rassf3Q99P51 232 aa17.7■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Pkp2Q9CQ73 795 aaKnown RBP17.7■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Tmem39aQ9CYC3 486 aa17.7■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Q9DAQ4 598 aa17.7■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Syngap1F6SEU4 1340 aa17.7■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Cops5O35864 334 aa17.69■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Stra6O70491 670 aa17.69■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Aldh1a1P24549 501 aa17.69■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 F2rP30558 430 aa17.69■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Avpr1aQ62463 423 aa17.69■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Kiaa1328Q6NZK5 612 aa17.69■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Fsd1Q7TPM6 496 aa17.69■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Tti2Q8BGV4 512 aa17.69■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Iqsec1Q8R0S2 961 aa17.69■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Supt16hQ920B9 1047 aa17.69■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Syt17Q920M7 470 aa17.69■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 BrapQ99MP8 591 aa17.69■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Six6os1Q9CTN5 574 aa17.69■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 TbcbQ9D1E6 244 aa17.69■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Limd1Q9QXD8 668 aa17.69■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Psmd10Q9Z2X2 231 aa17.69■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Obsl1D3YYU8 1804 aaKnown RBP17.69■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Rnf123Q5XPI3 1314 aa17.69■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Zc3h7bF8VPP8 982 aaKnown RBP17.68■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Adam15O88839 864 aa17.68■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Kcna1P16388 495 aa17.68■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Nap1l2P51860 460 aa17.68■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Anapc15P60007 132 aa17.68■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Cplx2P84086 134 aa17.68■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Cnnm3Q32NY4 713 aa17.68■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Fam189a2Q4FZH1 290 aa17.68■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Aldh5a1Q8BWF0 523 aa17.68■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Sppl3Q9CUS9 384 aa17.68■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Irx5Q9JKQ4 484 aa17.68■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Tle2Q9WVB2 767 aa17.68■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Arid3bQ9Z1N7 568 aa17.68■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Zscan20B2KFW1 1030 aa17.67■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 AunipE9Q6Z5 340 aa17.67■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Klhl33G3UW92 533 aa17.67■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 PuraP42669 321 aaKnown RBP17.67■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Meis2P97367 477 aa17.67■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Rnpc3Q3UZ01 514 aaKnown RBP17.67■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Rnf207Q3V3A7 635 aa17.67■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Phf24Q80TL4 400 aa17.67■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Etv3Q8R4Z4 513 aa17.67■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Ddx41Q91VN6 622 aaKnown RBP17.67■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Coa7Q921H9 231 aa17.67■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Nxf1Q99JX7 618 aaKnown RBP17.67■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 SrcapA0A087WQ44 3271 aa17.67■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Syt2P46097 422 aa17.66■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Lman2lP59481 347 aa17.66■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Psmc6P62334 389 aa17.66■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Taf1bP97358 586 aa17.66■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Srebf2Q3U1N2 1130 aa17.66■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Xxylt1Q3U4G3 392 aa17.66■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Arhgap1Q5FWK3 439 aa17.66■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Zbed4Q80WQ9 1168 aa17.66■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Fgd4Q91ZT5 766 aa17.66■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Rcan1Q9JHG6 198 aa17.66■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Pgap3A2A559 320 aa17.65■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Pfkfb3A7UAK5 555 aa17.65■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Itgb5O70309 798 aa17.65■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 FosP01101 380 aa17.65■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Cd72P21855 354 aa17.65■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 FpgsP48760 587 aa17.65■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Cct2P80314 535 aaKnown RBP17.65■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Pkp1P97350 728 aaKnown RBP17.65■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Entpd7Q3TCT4 606 aa17.65■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 1700001K19RikQ80ZT1 219 aa17.65■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Calhm6Q8C9E8 313 aa17.65■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Olfr1494Q8VGP8 315 aa17.65■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Anapc4Q91W96 807 aa17.65■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Bhmt2Q91WS4 363 aa17.65■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Me2Q99KE1 589 aa17.65■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 FibpQ9JI19 357 aa17.65■□□□□ 0.42
Hmgb1-208ENSMUST00000139443 Foxp1P58462 705 aa17.64■□□□□ 0.41
Hmgb1-208ENSMUST00000139443 Gcnt1Q09324 428 aa17.64■□□□□ 0.41
Hmgb1-208ENSMUST00000139443 ZbbxQ0P5X5 716 aa17.64■□□□□ 0.41
Hmgb1-208ENSMUST00000139443 Znf800Q0VEE6 662 aa17.64■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms