RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Impg2Q80XH2 1243 aa13.49□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Ctdspl2Q8BG15 465 aa13.49□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Dnm3Q8BZ98 863 aa13.49□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Psip1Q99JF8 528 aaKnown RBP13.49□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Cxcl11Q9JHH5 100 aa13.49□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Slc12a7Q9WVL3 1083 aa13.49□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Pck1Q9Z2V4 622 aa13.49□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Ephb4P54761 987 aa13.49□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Khdrbs1Q60749 443 aaKnown RBP13.49□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Ccdc92Q8VDN4 314 aa13.49□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Tulp1Q9Z273 543 aa13.49□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Dync1i2O88487 612 aaKnown RBP13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 P4hbP09103 509 aaKnown RBP13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 BcrQ6PAJ1 1270 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Ankfy1Q810B6 1169 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Catsper1Q91ZR5 686 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Cul1Q9WTX6 776 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Gm5580A0A0N4SVP8 411 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 P2rx5Q3UYI1 455 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Naa35Q6PHQ8 725 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Klhl29Q80T74 875 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 SmtnQ921U8 923 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Tfap4Q9JIZ5 338 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Krt74Q6IFZ9 495 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Gpaa1Q9WTK3 621 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Glt1d1A4FUP9 346 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Dnaaf5B9EJR8 853 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Erich2E9Q1A6 463 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Snap23O09044 210 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Mphosph8Q3TYA6 858 aaKnown RBP13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Ankrd13cQ3UX43 541 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Trpc6Q61143 930 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 PapolaQ61183 739 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Ccdc50Q810U5 305 aaKnown RBP13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Cog5Q8C0L8 829 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Dnajc17Q91WT4 303 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Adarb2Q9JI20 745 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Bnip3lQ9Z2F7 218 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Atf5O70191 283 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Ctnnd1P30999 938 aaKnown RBP13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 AlcamQ61490 583 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Ahcyl2Q68FL4 613 aaKnown RBP13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Med7Q9CZB6 233 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Mphosph6Q9D1Q1 161 aa13.48□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Ttc41Q692V3 1318 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Gm45194A0A140LJG2 572 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 4932429P05RikA2ADI4 785 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Mcf2A2AEU1 1111 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Mmrn2A6H6E2 943 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Pde8bE9Q4S1 865 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Lipo1J3QME6 396 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Il7P10168 154 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Gucy2fQ5SDA5 1108 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Panx2Q6IMP4 677 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Mterf4Q8BVN4 346 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Cdc26Q99JP4 85 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Polr3cQ9D483 533 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Usp42B2RQC2 1324 aaKnown RBP13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Palm2Q8BR92 376 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Arhgef40Q3UPH7 1517 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Clasp1Q80TV8 1535 aaKnown RBP13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 SelenovD3YXG1 328 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Cyp11b2P15539 500 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Mettl17Q3U2U7 461 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Cep70Q6IQY5 616 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Nrbp1Q99J45 535 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Gm4841E9QAA8 417 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Atp8a1P70704 1164 aa13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Yars2Q8BYL4 472 aaKnown RBP13.47□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Gm9774A0A0A6YVU8 407 aa13.46□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Elmsan1E9Q2I4 1089 aaKnown RBP13.46□□□□□ -0.25
Ssh1-202ENSMUST00000112298 GsnP13020 780 aa13.46□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Gtpbp6Q3U6U5 514 aa13.46□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Fam81aQ3UXZ6 364 aa13.46□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Nxf7Q80SZ6 620 aaKnown RBP13.46□□□□□ -0.25
Ssh1-202ENSMUST00000112298 AdarQ99MU3 1178 aaKnown RBP13.46□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Sytl1Q99N80 567 aa13.46□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Apopt1Q9CQW7 192 aa13.46□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Tmed2Q9R0Q3 201 aa13.46□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Mmrn1B2RPV6 1210 aa13.46□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Tlr7P58681 1050 aa13.46□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Sparcl1P70663 650 aa13.46□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Taf1bP97358 586 aa13.46□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Map3k7Q62073 579 aa13.46□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Haus4Q8BFT2 363 aa13.46□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Serpinb10Q8K1K6 397 aa13.46□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Ttc4Q8R3H9 386 aa13.46□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Orc3Q9JK30 715 aaKnown RBP13.46□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Irx1P81068 480 aa13.46□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Krt34Q9D646 392 aa13.46□□□□□ -0.25
Ssh1-202ENSMUST00000112298 Gm11549A0A286YD83 63 aa13.46□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Asap3Q5U464 904 aa13.46□□□□□ -0.26
Ssh1-202ENSMUST00000112298 AsnsQ61024 561 aa13.46□□□□□ -0.26
Ssh1-202ENSMUST00000112298 ThrspQ62264 150 aa13.46□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Arid3aQ62431 601 aa13.46□□□□□ -0.26
Ssh1-202ENSMUST00000112298 SrlQ7TQ48 910 aa13.46□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Sap130Q8BIH0 1057 aa13.46□□□□□ -0.26
Ssh1-202ENSMUST00000112298 JrklB2RRL2 523 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Pcdhb9E9Q5G2 828 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Pde4aO89084 844 aa13.45□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms