RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Gm5134E9QAB5 671 aa16.64■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Tmigd3G3X8R9 209 aa16.64■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Gm21969J3QJZ1 289 aa16.64■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Epb41l2O70318 988 aaKnown RBP16.64■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Pcdha4O88689 947 aa16.64■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Evi5P97366 809 aa16.64■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Kiaa1468Q148V7 1216 aa16.64■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Tmem63bQ3TWI9 832 aa16.64■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Fdxacb1Q3UY23 622 aa16.64■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Csrnp2Q8BGQ2 534 aa16.64■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Iws1Q8C1D8 766 aa16.64■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Mrpl58Q8R035 206 aa16.64■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Iqca1Q9CUL5 857 aa16.64■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Saal1Q9D2C2 474 aa16.64■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Extl2Q9ES89 330 aa16.64■□□□□ 0.26
Ercc1-201ENSMUST00000003645 Cntnap5cQ0V8T7 1305 aa16.64■□□□□ 0.25
Ercc1-201ENSMUST00000003645 ImpactO55091 318 aa16.64■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Igfbp4P47879 254 aa16.64■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Erbb2P70424 1256 aa16.64■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Arhgef16Q3U5C8 713 aa16.64■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Trappc3lQ4KL14 181 aa16.64■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Hdac4Q6NZM9 1076 aa16.64■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Appl2Q8K3G9 662 aa16.64■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Mxra8Q9DBV4 442 aa16.64■□□□□ 0.25
Ercc1-201ENSMUST00000003645 SfnO70456 248 aaKnown RBP16.63■□□□□ 0.25
Ercc1-201ENSMUST00000003645 ArP19091 899 aa16.63■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Acsl1P41216 699 aa16.63■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Bach1P97302 739 aa16.63■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Znf653Q6YND2 615 aa16.63■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Atg4cQ811C2 458 aa16.63■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Bbs9Q811G0 885 aa16.63■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Micall1Q8BGT6 870 aa16.63■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Ccdc150Q8CDI7 1110 aa16.63■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Mettl5Q8K1A0 209 aa16.63■□□□□ 0.25
Ercc1-201ENSMUST00000003645 LpxnQ99N69 386 aa16.63■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Glipr1l2Q9CQ35 332 aa16.63■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Fxr2Q9WVR4 673 aaKnown RBP16.63■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Cntnap2Q9CPW0 1332 aa16.62■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Mroh8E9PYI4 1049 aa16.62■□□□□ 0.25
Ercc1-201ENSMUST00000003645 AunipE9Q6Z5 340 aa16.62■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Gm4758L7N258 96 aa16.62■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Esr2O08537 530 aa16.62■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Tpd52l1O54818 204 aa16.62■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Itgb7P26011 806 aa16.62■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Kcna2P63141 499 aa16.62■□□□□ 0.25
Ercc1-201ENSMUST00000003645 4933427I04RikQ3V053 235 aa16.62■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Znf652Q5DU09 608 aa16.62■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Kif5bQ61768 963 aa16.62■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Gpd2Q64521 727 aa16.62■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Usp49Q6P9L4 685 aa16.62■□□□□ 0.25
Ercc1-201ENSMUST00000003645 DekQ7TNV0 380 aaKnown RBP16.62■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Olfr119Q7TRJ5 321 aa16.62■□□□□ 0.25
Ercc1-201ENSMUST00000003645 CrebrfQ8CDG5 640 aaKnown RBP16.62■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Vps16Q920Q4 839 aa16.62■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Arl6ip4Q9JM93 229 aa16.62■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Rasa2P58069 847 aa16.61■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Pdlim7Q3TJD7 457 aa16.61■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Miga1Q4QQM5 600 aa16.61■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Ift122Q6NWV3 1182 aa16.61■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Rusc1Q8BG26 893 aa16.61■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Gpatch3Q8BIY1 525 aa16.61■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Arhgef19Q8BWA8 802 aa16.61■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Vps53Q8CCB4 832 aa16.61■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Zcchc18Q8VD24 393 aa16.61■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Dnajc17Q91WT4 303 aa16.61■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Ivns1abpQ920Q8 642 aa16.61■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Coa7Q921H9 231 aa16.61■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Med4Q9CQA5 270 aa16.61■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Snw1Q9CSN1 536 aaKnown RBP16.61■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Snrnp35Q9D384 244 aa16.61■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Leng1Q9DB98 261 aa16.61■□□□□ 0.25
Ercc1-201ENSMUST00000003645 SetQ9EQU5 289 aaKnown RBP16.61■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Kcnh7Q9ER47 1195 aa16.61■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Gm10436L7N1Y3 520 aa16.6■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Pfkfb1P70266 471 aa16.6■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Taf1bP97358 586 aa16.6■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Lrrfip1Q3UZ39 729 aaKnown RBP16.6■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Nlrp2Q4PLS0 1046 aaKnown RBP16.6■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Tfe3Q64092 572 aaKnown RBP16.6■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Zscan22Q8BGS5 496 aa16.6■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Cdca8Q8BHX3 289 aa16.6■□□□□ 0.25
Ercc1-201ENSMUST00000003645 CnstQ8CBC4 711 aa16.6■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Trim32Q8CH72 655 aa16.6■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Dlk2Q8K1E3 382 aa16.6■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Zc3h4Q6ZPZ3 1304 aaKnown RBP16.6■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Barx2O08686 283 aa16.59■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Dapk3O54784 448 aa16.59■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Tdo2P48776 406 aa16.59■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Hoxc13P50207 328 aa16.59■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Pbxip1Q3TVI8 727 aa16.59■□□□□ 0.25
Ercc1-201ENSMUST00000003645 KhsrpQ3U0V1 748 aaKnown RBP16.59■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Lrrc36Q3V0M2 755 aa16.59■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Ccna1Q61456 421 aa16.59■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Tpd52Q62393 224 aa16.59■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Zbtb7bQ64321 544 aa16.59■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Tmem132dQ76HP3 1097 aa16.59■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Moxd2Q7TT41 619 aa16.59■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Samm50Q8BGH2 469 aa16.59■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Dhx32Q8BZS9 744 aa16.59■□□□□ 0.25
Ercc1-201ENSMUST00000003645 Fbxo18Q8K2I9 1042 aa16.59■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms