RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C RRP8P38961 392 aaKnown RBP5.48□□□□□ -1.53
PAN1YIR006C NUP159P40477 1460 aa5.47□□□□□ -1.53
PAN1YIR006C GCN2P15442 1659 aa5.47□□□□□ -1.53
PAN1YIR006C SRS2P12954 1174 aa5.46□□□□□ -1.53
PAN1YIR006C SUI2P20459 304 aaKnown RBP5.46□□□□□ -1.53
PAN1YIR006C SAP155P43612 1002 aa5.46□□□□□ -1.53
PAN1YIR006C GYP7P48365 746 aa5.46□□□□□ -1.53
PAN1YIR006C VPS64Q03944 604 aa5.46□□□□□ -1.53
PAN1YIR006C RNR2P09938 399 aaKnown RBP5.46□□□□□ -1.54
PAN1YIR006C OSW7P43611 510 aa5.46□□□□□ -1.54
PAN1YIR006C SLD2P34252 453 aa5.46□□□□□ -1.54
PAN1YIR006C SPO1P53541 631 aa5.46□□□□□ -1.54
PAN1YIR006C RAD50P12753 1312 aa5.46□□□□□ -1.54
PAN1YIR006C HSP104P31539 908 aaKnown RBP5.45□□□□□ -1.54
PAN1YIR006C YJL181WP46987 611 aa5.45□□□□□ -1.54
PAN1YIR006C ENT3P47160 408 aa5.45□□□□□ -1.54
PAN1YIR006C RTC1Q08281 1341 aa5.45□□□□□ -1.54
PAN1YIR006C SSA2P10592 639 aaKnown RBP5.45□□□□□ -1.54
PAN1YIR006C RPO31P04051 1460 aa5.45□□□□□ -1.54
PAN1YIR006C MTR4P47047 1073 aaKnown RBP5.45□□□□□ -1.54
PAN1YIR006C AOS1Q06624 347 aa5.45□□□□□ -1.54
PAN1YIR006C YBT1P32386 1661 aa5.44□□□□□ -1.54
PAN1YIR006C VMS1Q04311 632 aaKnown RBP5.44□□□□□ -1.54
PAN1YIR006C ROX1P25042 368 aa5.44□□□□□ -1.54
PAN1YIR006C IPL1P38991 367 aa5.44□□□□□ -1.54
PAN1YIR006C STM1P39015 273 aaKnown RBP5.44□□□□□ -1.54
PAN1YIR006C SES1P07284 462 aaKnown RBP5.44□□□□□ -1.54
PAN1YIR006C YAP3P38749 330 aa5.44□□□□□ -1.54
PAN1YIR006C POL32P47110 350 aa5.44□□□□□ -1.54
PAN1YIR006C SGD1Q06132 899 aa5.44□□□□□ -1.54
PAN1YIR006C GEA2P39993 1459 aaKnown RBP5.43□□□□□ -1.54
PAN1YIR006C DRS2P39524 1355 aa5.43□□□□□ -1.54
PAN1YIR006C PCT1P13259 424 aa5.43□□□□□ -1.54
PAN1YIR006C SAC6P32599 642 aaKnown RBP5.43□□□□□ -1.54
PAN1YIR006C PBY1P38254 753 aa5.43□□□□□ -1.54
PAN1YIR006C LCD1Q04377 747 aa5.43□□□□□ -1.54
PAN1YIR006C RRI2Q12348 645 aa5.43□□□□□ -1.54
PAN1YIR006C SFI1Q12369 946 aa5.43□□□□□ -1.54
PAN1YIR006C TY2B-LR1P0C2J3 1770 aa5.43□□□□□ -1.54
PAN1YIR006C TY2B-FP0CX63 1770 aa5.43□□□□□ -1.54
PAN1YIR006C TY2B-GR2P0CX64 1770 aa5.43□□□□□ -1.54
PAN1YIR006C TY2B-CP25384 1770 aa5.43□□□□□ -1.54
PAN1YIR006C TY2B-DR2Q03494 1770 aa5.43□□□□□ -1.54
PAN1YIR006C TY1B-DR1Q03855 1755 aa5.43□□□□□ -1.54
PAN1YIR006C TY2B-DR3Q07791 1770 aaKnown RBP5.43□□□□□ -1.54
PAN1YIR006C TY2B-OR1Q12113 1770 aa5.43□□□□□ -1.54
PAN1YIR006C TY2B-DR1Q12472 1770 aa5.43□□□□□ -1.54
PAN1YIR006C TY2B-OR2Q12501 1770 aa5.43□□□□□ -1.54
PAN1YIR006C MGA2P40578 1113 aa5.43□□□□□ -1.54
PAN1YIR006C RSC1P53236 928 aa5.43□□□□□ -1.54
PAN1YIR006C RPS24AP0CX31 135 aaKnown RBP5.43□□□□□ -1.54
PAN1YIR006C RPS24BP0CX32 135 aaKnown RBP5.43□□□□□ -1.54
PAN1YIR006C TRP5P00931 707 aaKnown RBP5.42□□□□□ -1.54
PAN1YIR006C VPS60Q03390 229 aa5.42□□□□□ -1.54
PAN1YIR006C GIN4Q12263 1142 aa5.42□□□□□ -1.54
PAN1YIR006C NBL1Q3E7Y6 73 aa5.42□□□□□ -1.54
PAN1YIR006C PDR18P53756 1333 aa5.42□□□□□ -1.54
PAN1YIR006C CAJ1P39101 391 aa5.42□□□□□ -1.54
PAN1YIR006C NOC2P39744 710 aaKnown RBP5.42□□□□□ -1.54
PAN1YIR006C TRK1P12685 1235 aa5.42□□□□□ -1.54
PAN1YIR006C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
PAN1YIR006C MAM1P40065 302 aa5.41□□□□□ -1.54
PAN1YIR006C FKH1P40466 484 aa5.41□□□□□ -1.54
PAN1YIR006C YIR014WP40570 242 aa5.41□□□□□ -1.54
PAN1YIR006C KRE33P53914 1056 aaKnown RBP5.41□□□□□ -1.54
PAN1YIR006C TY2B-BQ12491 1770 aa5.41□□□□□ -1.54
PAN1YIR006C TTI1P36097 1038 aa5.41□□□□□ -1.54
PAN1YIR006C NUP133P36161 1157 aa5.41□□□□□ -1.54
PAN1YIR006C AKL1P38080 1108 aaKnown RBP5.41□□□□□ -1.54
PAN1YIR006C NST1P53935 1240 aa5.41□□□□□ -1.54
PAN1YIR006C BMS1Q08965 1183 aaKnown RBP5.41□□□□□ -1.54
PAN1YIR006C PRD1P25375 712 aa5.41□□□□□ -1.54
PAN1YIR006C TYS1P36421 394 aaKnown RBP5.41□□□□□ -1.54
PAN1YIR006C DNF1P32660 1571 aa5.4□□□□□ -1.54
PAN1YIR006C TCD1P38756 429 aa5.4□□□□□ -1.54
PAN1YIR006C BUD6P41697 788 aa5.4□□□□□ -1.54
PAN1YIR006C ATG13Q06628 738 aa5.4□□□□□ -1.54
PAN1YIR006C MIF2P35201 549 aa5.4□□□□□ -1.55
PAN1YIR006C NKP2Q06162 153 aa5.4□□□□□ -1.55
PAN1YIR006C CLB1P24868 471 aa5.4□□□□□ -1.55
PAN1YIR006C SVF1Q05515 481 aa5.4□□□□□ -1.55
PAN1YIR006C HCR1Q05775 265 aaKnown RBP5.4□□□□□ -1.55
PAN1YIR006C SNU66Q12420 587 aaPredicted RBP5.4□□□□□ -1.55
PAN1YIR006C MSP1P28737 362 aa5.39□□□□□ -1.55
PAN1YIR006C DID4P36108 232 aa5.39□□□□□ -1.55
PAN1YIR006C YMR124WP39523 943 aaKnown RBP5.39□□□□□ -1.55
PAN1YIR006C RPL19AP0CX82 189 aaKnown RBP5.39□□□□□ -1.55
PAN1YIR006C RPL19BP0CX83 189 aaPredicted RBP5.39□□□□□ -1.55
PAN1YIR006C SAP190P36123 1033 aa5.39□□□□□ -1.55
PAN1YIR006C BBC1P47068 1157 aa5.39□□□□□ -1.55
PAN1YIR006C RAV1P47104 1357 aa5.38□□□□□ -1.55
PAN1YIR006C VTH1P40438 1549 aa5.38□□□□□ -1.55
PAN1YIR006C VTH2P40890 1549 aa5.38□□□□□ -1.55
PAN1YIR006C IMP2'P32351 346 aa5.38□□□□□ -1.55
PAN1YIR006C DLD1P32891 587 aa5.38□□□□□ -1.55
PAN1YIR006C PIL1P53252 339 aaKnown RBP5.38□□□□□ -1.55
PAN1YIR006C CYC8P14922 966 aa5.37□□□□□ -1.55
PAN1YIR006C RIX1P38883 763 aaPredicted RBP5.37□□□□□ -1.55
PAN1YIR006C VPS20Q04272 221 aa5.37□□□□□ -1.55
PAN1YIR006C RUD3Q12234 484 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms