RNA–Protein interactions for RNA: ENST00000641309.1

CASC19-221, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,382 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-221ENST00000641309 HS6ST3Q8IZP7 471 aa9.51□□□□□ -0.89
CASC19-221ENST00000641309 IER5LQ5T953 404 aa9.5□□□□□ -0.89
CASC19-221ENST00000641309 SEC24BO95487 1268 aa9.47□□□□□ -0.89
CASC19-221ENST00000641309 POTEJP0CG39 1038 aa9.47□□□□□ -0.89
CASC19-221ENST00000641309 SOX12O15370 315 aa9.46□□□□□ -0.9
CASC19-221ENST00000641309 WDR62O43379 1518 aa9.46□□□□□ -0.9
CASC19-221ENST00000641309 EFCAB3Q8N7B9 438 aa9.46□□□□□ -0.9
CASC19-221ENST00000641309 CEP164Q9UPV0 1460 aa9.46□□□□□ -0.9
CASC19-221ENST00000641309 FANCD2Q9BXW9 1451 aa9.45□□□□□ -0.9
CASC19-221ENST00000641309 FAM163AQ96GL9 167 aaPredicted RBP9.45□□□□□ -0.9
CASC19-221ENST00000641309 RYDENQ9NUL5 291 aaKnown RBP9.43□□□□□ -0.9
CASC19-221ENST00000641309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.43□□□□□ -0.97e-8■□□□□ 10.2
CASC19-221ENST00000641309 PLCG2P16885 1265 aa9.42□□□□□ -0.9
CASC19-221ENST00000641309 BBXQ8WY36 941 aaPredicted RBP9.42□□□□□ -0.9
CASC19-221ENST00000641309 OCEL1Q9H607 264 aa9.42□□□□□ -0.9
CASC19-221ENST00000641309 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.42□□□□□ -0.9
CASC19-221ENST00000641309 NLRP6P59044 892 aa9.41□□□□□ -0.9
CASC19-221ENST00000641309 LCE2DQ5TA82 110 aaPredicted RBP9.4□□□□□ -0.9
CASC19-221ENST00000641309 URB2Q14146 1524 aaKnown RBP9.39□□□□□ -0.91
CASC19-221ENST00000641309 IRX5P78411 483 aaPredicted RBP9.38□□□□□ -0.91
CASC19-221ENST00000641309 CFTRP13569 1480 aa9.37□□□□□ -0.91
CASC19-221ENST00000641309 PHF8Q9UPP1 1060 aa9.37□□□□□ -0.91
CASC19-221ENST00000641309 RSF1Q96T23 1441 aaPredicted RBP9.36□□□□□ -0.91
CASC19-221ENST00000641309 G3V3G9 751 aa9.36□□□□□ -0.91
CASC19-221ENST00000641309 MFRPQ9BY79 579 aa9.35□□□□□ -0.91
CASC19-221ENST00000641309 RIMBP3CA6NJZ7 1639 aa9.34□□□□□ -0.91
CASC19-221ENST00000641309 RIMBP3BA6NNM3 1639 aa9.34□□□□□ -0.91
CASC19-221ENST00000641309 RIMBP3Q9UFD9 1639 aa9.34□□□□□ -0.91
CASC19-221ENST00000641309 CYB5RLQ6IPT4 315 aa9.34□□□□□ -0.91
CASC19-221ENST00000641309 L3MBTL3Q96JM7 780 aaPredicted RBP9.34□□□□□ -0.91
CASC19-221ENST00000641309 COLQQ9Y215 455 aaPredicted RBP9.34□□□□□ -0.91
CASC19-221ENST00000641309 ZNF608Q9ULD9 1512 aaPredicted RBP9.33□□□□□ -0.92
CASC19-221ENST00000641309 POTEFA5A3E0 1075 aa9.32□□□□□ -0.92
CASC19-221ENST00000641309 NKX1-1Q15270 411 aaPredicted RBP9.32□□□□□ -0.92
CASC19-221ENST00000641309 ILDR1Q86SU0 546 aaPredicted RBP9.32□□□□□ -0.92
CASC19-221ENST00000641309 SPRYD3Q8NCJ5 442 aa9.32□□□□□ -0.92
CASC19-221ENST00000641309 TOP2AP11388 1531 aaKnown RBP9.31□□□□□ -0.92
CASC19-221ENST00000641309 PDCD7Q8N8D1 485 aaKnown RBP9.3□□□□□ -0.92
CASC19-221ENST00000641309 FBXO22Q8NEZ5 403 aa9.3□□□□□ -0.92
CASC19-221ENST00000641309 PRDM2Q13029 1718 aa9.29□□□□□ -0.92
CASC19-221ENST00000641309 CCDC88BA6NC98 1476 aa9.28□□□□□ -0.92
CASC19-221ENST00000641309 GTPBP6O43824 516 aaPredicted RBP9.27□□□□□ -0.93
CASC19-221ENST00000641309 PAXIP1Q6ZW49 1069 aaPredicted RBP9.27□□□□□ -0.93
CASC19-221ENST00000641309 CDAN1Q8IWY9 1227 aa9.27□□□□□ -0.93
CASC19-221ENST00000641309 CFAP44Q96MT7 982 aa9.27□□□□□ -0.93
CASC19-221ENST00000641309 ARHGEF11O15085 1522 aa9.26□□□□□ -0.93
CASC19-221ENST00000641309 DPY19L2Q6NUT2 758 aa9.26□□□□□ -0.93
CASC19-221ENST00000641309 MS4A4AQ96JQ5 239 aa9.26□□□□□ -0.93
CASC19-221ENST00000641309 BOLA1Q9Y3E2 137 aa9.25□□□□□ -0.93
CASC19-221ENST00000641309 AQRO60306 1485 aaKnown RBP eCLIP9.25□□□□□ -0.933e-6■■■■□ 24.7
CASC19-221ENST00000641309 TOPBP1Q92547 1522 aa9.25□□□□□ -0.93
CASC19-221ENST00000641309 CHD1O14646 1710 aa9.25□□□□□ -0.93
CASC19-221ENST00000641309 IFT140Q96RY7 1462 aa9.24□□□□□ -0.93
CASC19-221ENST00000641309 C3orf67Q6ZVT6 689 aa9.24□□□□□ -0.93
CASC19-221ENST00000641309 EIF4G3O43432 1585 aaKnown RBP9.23□□□□□ -0.93
CASC19-221ENST00000641309 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.21□□□□□ -0.94
CASC19-221ENST00000641309 PPP1R37O75864 691 aa9.2□□□□□ -0.94
CASC19-221ENST00000641309 MICALL2Q8IY33 904 aa9.2□□□□□ -0.94
CASC19-221ENST00000641309 SLAIN1Q8ND83 568 aa9.2□□□□□ -0.94
CASC19-221ENST00000641309 TDRD9Q8NDG6 1382 aaKnown RBP9.19□□□□□ -0.94
CASC19-221ENST00000641309 RAD54L2Q9Y4B4 1467 aa9.19□□□□□ -0.94
CASC19-221ENST00000641309 DNMBPQ6XZF7 1577 aa9.18□□□□□ -0.94
CASC19-221ENST00000641309 SNPHO15079 494 aa9.18□□□□□ -0.94
CASC19-221ENST00000641309 TMEM121BQ9BXQ6 578 aaPredicted RBP9.18□□□□□ -0.94
CASC19-221ENST00000641309 MYT1Q01538 1121 aa9.17□□□□□ -0.94
CASC19-221ENST00000641309 ARAP1Q96P48 1450 aa9.17□□□□□ -0.94
CASC19-221ENST00000641309 PLCB2Q00722 1185 aa9.16□□□□□ -0.94
CASC19-221ENST00000641309 TARBP1Q13395 1621 aaKnown RBP9.16□□□□□ -0.94
CASC19-221ENST00000641309 ST18O60284 1047 aa9.15□□□□□ -0.94
CASC19-221ENST00000641309 CHMP7Q8WUX9 453 aaPredicted RBP9.15□□□□□ -0.94
CASC19-221ENST00000641309 ABCC8Q09428 1581 aa9.15□□□□□ -0.94
CASC19-221ENST00000641309 POLA1P09884 1462 aaPredicted RBP9.14□□□□□ -0.95
CASC19-221ENST00000641309 SOGA1O94964 1423 aa9.13□□□□□ -0.95
CASC19-221ENST00000641309 TMC2Q8TDI7 906 aa9.11□□□□□ -0.95
CASC19-221ENST00000641309 SNAPC4Q5SXM2 1469 aa9.11□□□□□ -0.95
CASC19-221ENST00000641309 PDE4AP27815 886 aa9.09□□□□□ -0.95
CASC19-221ENST00000641309 HAP1P54257 671 aaPredicted RBP9.09□□□□□ -0.95
CASC19-221ENST00000641309 FGD5Q6ZNL6 1462 aa9.08□□□□□ -0.96
CASC19-221ENST00000641309 MMRN1Q13201 1228 aa9.06□□□□□ -0.96
CASC19-221ENST00000641309 CUX1P39880 1505 aa9.06□□□□□ -0.96
CASC19-221ENST00000641309 SUPT5HO00267 1087 aaKnown RBP9.04□□□□□ -0.96
CASC19-221ENST00000641309 GPHNQ9NQX3 736 aaPredicted RBP9.04□□□□□ -0.96
CASC19-221ENST00000641309 SYNJ1O43426 1573 aa9.04□□□□□ -0.96
CASC19-221ENST00000641309 CLASP1Q7Z460 1538 aa9.03□□□□□ -0.96
CASC19-221ENST00000641309 C2orf72A6NCS6 295 aa9.03□□□□□ -0.96
CASC19-221ENST00000641309 SPNS2Q8IVW8 549 aa9.03□□□□□ -0.96
CASC19-221ENST00000641309 TSHZ2Q9NRE2 1034 aa9.03□□□□□ -0.96
CASC19-221ENST00000641309 PBRM1Q86U86 1689 aa9.03□□□□□ -0.96
CASC19-221ENST00000641309 GRIN2BQ13224 1484 aa9.03□□□□□ -0.96
CASC19-221ENST00000641309 LARP6Q9BRS8 491 aaKnown RBP9.02□□□□□ -0.97
CASC19-221ENST00000641309 WDR70Q9NW82 654 aa9.02□□□□□ -0.97
CASC19-221ENST00000641309 TMEM92Q6UXU6 159 aa9.01□□□□□ -0.97
CASC19-221ENST00000641309 CRISPLD2Q9H0B8 497 aa9.01□□□□□ -0.97
CASC19-221ENST00000641309 TTBK1Q5TCY1 1321 aaPredicted RBP9.01□□□□□ -0.97
CASC19-221ENST00000641309 SYNJ2O15056 1496 aa9□□□□□ -0.97
CASC19-221ENST00000641309 GAPVD1Q14C86 1478 aa9□□□□□ -0.97
CASC19-221ENST00000641309 MAGI1Q96QZ7 1491 aaPredicted RBP9□□□□□ -0.97
CASC19-221ENST00000641309 KIF3CO14782 793 aa8.99□□□□□ -0.97
CASC19-221ENST00000641309 FOXK1P85037 733 aa8.99□□□□□ -0.97
CASC19-221ENST00000641309 CADPS2Q86UW7 1296 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms