RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 TSR1Q2NL82 804 aaKnown RBP16.48■□□□□ 0.23
UBE3A-228ENST00000638155 CHIC2Q9UKJ5 165 aa16.47■□□□□ 0.23
UBE3A-228ENST00000638155 CALD1Q05682 793 aaKnown RBP16.47■□□□□ 0.23
UBE3A-228ENST00000638155 HMMRO75330 724 aa16.46■□□□□ 0.23
UBE3A-228ENST00000638155 VSIG10Q8N0Z9 540 aa16.46■□□□□ 0.23
UBE3A-228ENST00000638155 CCAR2Q8N163 923 aaKnown RBP16.46■□□□□ 0.22
UBE3A-228ENST00000638155 HIRIP3Q9BW71 556 aaPredicted RBP16.44■□□□□ 0.22
UBE3A-228ENST00000638155 SENP3Q9H4L4 574 aaPredicted RBP16.43■□□□□ 0.22
UBE3A-228ENST00000638155 TSPY4P0CV99 314 aa16.43■□□□□ 0.22
UBE3A-228ENST00000638155 TSPY10P0CW01 314 aa16.43■□□□□ 0.22
UBE3A-228ENST00000638155 DCAF1Q9Y4B6 1507 aa16.42■□□□□ 0.22
UBE3A-228ENST00000638155 MAP7D2Q96T17 732 aa16.42■□□□□ 0.22
UBE3A-228ENST00000638155 TPM1P09493 284 aa16.41■□□□□ 0.22
UBE3A-228ENST00000638155 PES1O00541 588 aaKnown RBP16.4■□□□□ 0.22
UBE3A-228ENST00000638155 SENP3-EIF4A1A0A087X0R7 540 aa16.4■□□□□ 0.22
UBE3A-228ENST00000638155 TPM2P07951 284 aa16.4■□□□□ 0.22
UBE3A-228ENST00000638155 B4GALNT3Q6L9W6 998 aa16.39■□□□□ 0.21
UBE3A-228ENST00000638155 ANO8Q9HCE9 1232 aaPredicted RBP16.39■□□□□ 0.21
UBE3A-228ENST00000638155 GPATCH3Q96I76 525 aa16.39■□□□□ 0.21
UBE3A-228ENST00000638155 TPD52L1Q16890 204 aaPredicted RBP16.39■□□□□ 0.21
UBE3A-228ENST00000638155 CCDC191Q8NCU4 936 aa16.39■□□□□ 0.21
UBE3A-228ENST00000638155 SLKQ9H2G2 1235 aaPredicted RBP16.39■□□□□ 0.21
UBE3A-228ENST00000638155 AK7Q96M32 723 aa16.36■□□□□ 0.21
UBE3A-228ENST00000638155 CDR1P51861 262 aa16.35■□□□□ 0.21
UBE3A-228ENST00000638155 STK11IPQ8N1F8 1099 aa16.34■□□□□ 0.21
UBE3A-228ENST00000638155 RUFY1Q96T51 708 aa16.34■□□□□ 0.21
UBE3A-228ENST00000638155 VPS53Q5VIR6 699 aa16.34■□□□□ 0.21
UBE3A-228ENST00000638155 RDXP35241 583 aaKnown RBP16.33■□□□□ 0.2
UBE3A-228ENST00000638155 MTUS2Q5JR59 1369 aa16.33■□□□□ 0.2
UBE3A-228ENST00000638155 GOLGA6L19H0YKK7 550 aa16.33■□□□□ 0.2
UBE3A-228ENST00000638155 U2SURPO15042 1029 aaKnown RBP16.32■□□□□ 0.2
UBE3A-228ENST00000638155 DCTN1Q14203 1278 aa16.32■□□□□ 0.2
UBE3A-228ENST00000638155 CCDC180Q9P1Z9 1646 aa16.32■□□□□ 0.2
UBE3A-228ENST00000638155 DDX11L8A8MPP1 907 aa16.31■□□□□ 0.2
UBE3A-228ENST00000638155 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.31■□□□□ 0.2
UBE3A-228ENST00000638155 KIF3AQ9Y496 699 aa16.31■□□□□ 0.2
UBE3A-228ENST00000638155 CSRNP3Q8WYN3 585 aa16.31■□□□□ 0.2
UBE3A-228ENST00000638155 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
UBE3A-228ENST00000638155 CWC15Q9P013 229 aaKnown RBP16.3■□□□□ 0.2
UBE3A-228ENST00000638155 IPO7O95373 1038 aaKnown RBP16.3■□□□□ 0.2
UBE3A-228ENST00000638155 KIF16BQ96L93 1317 aa16.3■□□□□ 0.2
UBE3A-228ENST00000638155 IPO8O15397 1037 aaKnown RBP16.29■□□□□ 0.2
UBE3A-228ENST00000638155 TRHP20396 242 aaPredicted RBP16.29■□□□□ 0.2
UBE3A-228ENST00000638155 APBB1O00213 710 aa16.29■□□□□ 0.2
UBE3A-228ENST00000638155 ACBD3Q9H3P7 528 aa16.29■□□□□ 0.2
UBE3A-228ENST00000638155 TCERG1O14776 1098 aaKnown RBP16.29■□□□□ 0.2
UBE3A-228ENST00000638155 RBM19Q9Y4C8 960 aaKnown RBP16.29■□□□□ 0.2
UBE3A-228ENST00000638155 MARCH6O60337 910 aa16.28■□□□□ 0.2
UBE3A-228ENST00000638155 G3V3G9 751 aa16.28■□□□□ 0.2
UBE3A-228ENST00000638155 DCAF8Q5TAQ9 597 aa16.28■□□□□ 0.2
UBE3A-228ENST00000638155 ZNF592Q92610 1267 aa16.27■□□□□ 0.2
UBE3A-228ENST00000638155 SF3A1Q15459 793 aaKnown RBP16.26■□□□□ 0.19
UBE3A-228ENST00000638155 H0YHG0 523 aa16.26■□□□□ 0.19
UBE3A-228ENST00000638155 POGKQ9P215 609 aa16.25■□□□□ 0.19
UBE3A-228ENST00000638155 GORABQ5T7V8 394 aa16.25■□□□□ 0.19
UBE3A-228ENST00000638155 CC2D1BQ5T0F9 858 aaKnown RBP16.25■□□□□ 0.19
UBE3A-228ENST00000638155 RTF1Q92541 710 aaKnown RBP16.25■□□□□ 0.19
UBE3A-228ENST00000638155 CARD11Q9BXL7 1154 aa16.25■□□□□ 0.19
UBE3A-228ENST00000638155 WWC1Q8IX03 1113 aa16.25■□□□□ 0.19
UBE3A-228ENST00000638155 CNKSR2Q8WXI2 1034 aa16.25■□□□□ 0.19
UBE3A-228ENST00000638155 ST18O60284 1047 aa16.24■□□□□ 0.19
UBE3A-228ENST00000638155 TCEAL9Q9UHQ7 104 aa16.24■□□□□ 0.19
UBE3A-228ENST00000638155 TRIM6-TRIM34B2RNG4 842 aa16.24■□□□□ 0.19
UBE3A-228ENST00000638155 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.24■□□□□ 0.198e-7■■■■■ 64.5
UBE3A-228ENST00000638155 HSP90B2PQ58FF3 399 aa16.23■□□□□ 0.19
UBE3A-228ENST00000638155 BECN2A8MW95 431 aa16.23■□□□□ 0.19
UBE3A-228ENST00000638155 ARGLU1Q9NWB6 273 aaPredicted RBP16.23■□□□□ 0.19
UBE3A-228ENST00000638155 RWDD1Q9H446 243 aaPredicted RBP16.23■□□□□ 0.19
UBE3A-228ENST00000638155 H3BQV1 296 aa16.22■□□□□ 0.19
UBE3A-228ENST00000638155 IFFO2Q5TF58 517 aa16.22■□□□□ 0.19
UBE3A-228ENST00000638155 ANKRD20A12PQ8NF67 263 aa16.22■□□□□ 0.19
UBE3A-228ENST00000638155 RGL3Q3MIN7 710 aa16.22■□□□□ 0.19
UBE3A-228ENST00000638155 MFAP1P55081 439 aaKnown RBP16.21■□□□□ 0.19
UBE3A-228ENST00000638155 DCAF8L1A6NGE4 600 aa16.21■□□□□ 0.19
UBE3A-228ENST00000638155 ATP6V1DQ9Y5K8 247 aa16.21■□□□□ 0.19
UBE3A-228ENST00000638155 ITPRIPQ8IWB1 547 aa16.21■□□□□ 0.18
UBE3A-228ENST00000638155 PCMTD1Q96MG8 357 aaPredicted RBP16.2■□□□□ 0.18
UBE3A-228ENST00000638155 PLCD4Q9BRC7 762 aa16.2■□□□□ 0.18
UBE3A-228ENST00000638155 ZRSR2Q15696 482 aaKnown RBP16.2■□□□□ 0.18
UBE3A-228ENST00000638155 HOMER1Q86YM7 354 aa16.2■□□□□ 0.18
UBE3A-228ENST00000638155 FAM13BQ9NYF5 915 aa16.2■□□□□ 0.18
UBE3A-228ENST00000638155 HDGFP51858 240 aaKnown RBP16.19■□□□□ 0.18
UBE3A-228ENST00000638155 KCNH8Q96L42 1107 aa16.19■□□□□ 0.18
UBE3A-228ENST00000638155 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.18■□□□□ 0.18
UBE3A-228ENST00000638155 NEXNQ0ZGT2 675 aa16.18■□□□□ 0.18
UBE3A-228ENST00000638155 SKOR2Q2VWA4 1001 aaPredicted RBP16.18■□□□□ 0.18
UBE3A-228ENST00000638155 RRP7BPQ9NSQ0 103 aa16.18■□□□□ 0.18
UBE3A-228ENST00000638155 IPO9Q96P70 1041 aaKnown RBP16.18■□□□□ 0.18
UBE3A-228ENST00000638155 CCDC66A2RUB6 948 aa16.17■□□□□ 0.18
UBE3A-228ENST00000638155 MEX3CQ5U5Q3 659 aaKnown RBP16.17■□□□□ 0.18
UBE3A-228ENST00000638155 MYO6Q9UM54 1294 aa16.16■□□□□ 0.18
UBE3A-228ENST00000638155 NOL8Q76FK4 1167 aaKnown RBP16.16■□□□□ 0.18
UBE3A-228ENST00000638155 ODF2Q5BJF6 829 aa16.16■□□□□ 0.18
UBE3A-228ENST00000638155 CHMP3Q9Y3E7 222 aa16.16■□□□□ 0.18
UBE3A-228ENST00000638155 HSP90AB3PQ58FF7 597 aa16.16■□□□□ 0.18
UBE3A-228ENST00000638155 CHMP4CQ96CF2 233 aa16.16■□□□□ 0.18
UBE3A-228ENST00000638155 HOOK1Q9UJC3 728 aaKnown RBP16.16■□□□□ 0.18
UBE3A-228ENST00000638155 PMFBP1Q8TBY8 1022 aa16.16■□□□□ 0.18
UBE3A-228ENST00000638155 CT47A1Q5JQC4 288 aaPredicted RBP16.15■□□□□ 0.18
UBE3A-228ENST00000638155 FOXD4L1Q9NU39 408 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms