RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 DIEXFQ68CQ4 756 aaKnown RBP25.3■■□□□ 1.64
PCDHGC3-205ENST00000617641 SIN3AQ96ST3 1273 aa25.29■■□□□ 1.64
PCDHGC3-205ENST00000617641 CDC42BPAQ5VT25 1732 aa25.29■■□□□ 1.64
PCDHGC3-205ENST00000617641 KDM6BO15054 1643 aa25.28■■□□□ 1.64
PCDHGC3-205ENST00000617641 ABCC2Q92887 1545 aa25.27■■□□□ 1.64
PCDHGC3-205ENST00000617641 ZNF777Q9ULD5 760 aaPredicted RBP25.27■■□□□ 1.64
PCDHGC3-205ENST00000617641 NEUROD1Q13562 356 aa25.25■■□□□ 1.63
PCDHGC3-205ENST00000617641 ROCK1Q13464 1354 aa25.25■■□□□ 1.63
PCDHGC3-205ENST00000617641 CROCC2H7BZ55 1655 aa25.17■■□□□ 1.62
PCDHGC3-205ENST00000617641 TRIM52Q96A61 297 aa25.17■■□□□ 1.62
PCDHGC3-205ENST00000617641 ADGBQ8N7X0 1667 aa25.15■■□□□ 1.62
PCDHGC3-205ENST00000617641 UHRF1BP1LA0JNW5 1464 aa25.13■■□□□ 1.61
PCDHGC3-205ENST00000617641 ZCCHC11Q5TAX3 1644 aaKnown RBP25.12■■□□□ 1.61
PCDHGC3-205ENST00000617641 PREX2Q70Z35 1606 aa25.12■■□□□ 1.61
PCDHGC3-205ENST00000617641 DENND4BO75064 1496 aaPredicted RBP25.11■■□□□ 1.61
PCDHGC3-205ENST00000617641 CDC42BPBQ9Y5S2 1711 aa25.11■■□□□ 1.61
PCDHGC3-205ENST00000617641 NCOA1Q15788 1441 aa25.11■■□□□ 1.61
PCDHGC3-205ENST00000617641 TIMELESSQ9UNS1 1208 aa25.11■■□□□ 1.61
PCDHGC3-205ENST00000617641 TTC37Q6PGP7 1564 aa25.1■■□□□ 1.61
PCDHGC3-205ENST00000617641 ADGRL2O95490 1459 aa25.1■■□□□ 1.61
PCDHGC3-205ENST00000617641 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.09■■□□□ 1.61
PCDHGC3-205ENST00000617641 KDM5BQ9UGL1 1544 aa25.08■■□□□ 1.61
PCDHGC3-205ENST00000617641 SAMD9LQ8IVG5 1584 aa25.06■■□□□ 1.6
PCDHGC3-205ENST00000617641 MPHOSPH9Q99550 1183 aa25.06■■□□□ 1.6
PCDHGC3-205ENST00000617641 ANKRD30AQ9BXX3 1397 aa25.04■■□□□ 1.6
PCDHGC3-205ENST00000617641 SHANK2Q9UPX8 1470 aa25.04■■□□□ 1.6
PCDHGC3-205ENST00000617641 KCNH8Q96L42 1107 aa25.04■■□□□ 1.6
PCDHGC3-205ENST00000617641 HNRNPMP52272 730 aaKnown RBP eCLIP25.03■■□□□ 1.6
PCDHGC3-205ENST00000617641 C9orf84Q5VXU9 1444 aa25.03■■□□□ 1.6
PCDHGC3-205ENST00000617641 TONSLQ96HA7 1378 aa25.03■■□□□ 1.6
PCDHGC3-205ENST00000617641 ARHGEF5Q12774 1597 aa25.02■■□□□ 1.6
PCDHGC3-205ENST00000617641 MBD5Q9P267 1494 aa25.01■■□□□ 1.59
PCDHGC3-205ENST00000617641 ARHGAP5Q13017 1502 aa25.01■■□□□ 1.59
PCDHGC3-205ENST00000617641 ACIN1Q9UKV3 1341 aaKnown RBP25.01■■□□□ 1.59
PCDHGC3-205ENST00000617641 PPP1R15AO75807 674 aaPredicted RBP25■■□□□ 1.59
PCDHGC3-205ENST00000617641 OSCARQ8IYS5 282 aa25■■□□□ 1.59
PCDHGC3-205ENST00000617641 MYO5CQ9NQX4 1742 aa25■■□□□ 1.59
PCDHGC3-205ENST00000617641 TSPY4P0CV99 314 aa24.97■■□□□ 1.59
PCDHGC3-205ENST00000617641 TSPY10P0CW01 314 aa24.97■■□□□ 1.59
PCDHGC3-205ENST00000617641 FOXD1Q16676 465 aa24.97■■□□□ 1.59
PCDHGC3-205ENST00000617641 CCDC141Q6ZP82 1450 aa24.96■■□□□ 1.59
PCDHGC3-205ENST00000617641 SYCP2Q9BX26 1530 aa24.95■■□□□ 1.58
PCDHGC3-205ENST00000617641 ANKRD50Q9ULJ7 1429 aa24.95■■□□□ 1.58
PCDHGC3-205ENST00000617641 SLC4A1APQ9BWU0 796 aaKnown RBP24.93■■□□□ 1.58
PCDHGC3-205ENST00000617641 PZPP20742 1482 aa24.93■■□□□ 1.58
PCDHGC3-205ENST00000617641 PLCH2O75038 1416 aa24.9■■□□□ 1.58
PCDHGC3-205ENST00000617641 KIF15Q9NS87 1388 aa24.89■■□□□ 1.58
PCDHGC3-205ENST00000617641 RSPH4AQ5TD94 716 aa24.89■■□□□ 1.57
PCDHGC3-205ENST00000617641 ANKRD30BQ9BXX2 1392 aa24.88■■□□□ 1.57
PCDHGC3-205ENST00000617641 MIER1Q8N108 512 aa24.87■■□□□ 1.57
PCDHGC3-205ENST00000617641 PLEKHH2Q8IVE3 1493 aa24.86■■□□□ 1.57
PCDHGC3-205ENST00000617641 WDR7Q9Y4E6 1490 aa24.86■■□□□ 1.57
PCDHGC3-205ENST00000617641 KIAA1107Q9UPP5 1409 aa24.86■■□□□ 1.57
PCDHGC3-205ENST00000617641 ARHGEF12Q9NZN5 1544 aa24.84■■□□□ 1.57
PCDHGC3-205ENST00000617641 MAST1Q9Y2H9 1570 aa24.83■■□□□ 1.57
PCDHGC3-205ENST00000617641 EFCAB2Q5VUJ9 269 aa24.82■■□□□ 1.56
PCDHGC3-205ENST00000617641 RPRD2Q5VT52 1461 aaKnown RBP24.8■■□□□ 1.56
PCDHGC3-205ENST00000617641 NUP155O75694 1391 aa24.79■■□□□ 1.56
PCDHGC3-205ENST00000617641 ABCC1P33527 1531 aa24.79■■□□□ 1.56
PCDHGC3-205ENST00000617641 PKD2Q13563 968 aa24.77■■□□□ 1.56
PCDHGC3-205ENST00000617641 ASXL2Q76L83 1435 aa24.77■■□□□ 1.56
PCDHGC3-205ENST00000617641 KDM5DQ9BY66 1539 aa24.76■■□□□ 1.55
PCDHGC3-205ENST00000617641 L3MBTL2Q969R5 705 aa24.75■■□□□ 1.55
PCDHGC3-205ENST00000617641 ARAP3Q8WWN8 1544 aa24.75■■□□□ 1.55
PCDHGC3-205ENST00000617641 HIRIP3Q9BW71 556 aaPredicted RBP24.74■■□□□ 1.55
PCDHGC3-205ENST00000617641 PLXNC1O60486 1568 aa24.74■■□□□ 1.55
PCDHGC3-205ENST00000617641 ABCA9Q8IUA7 1624 aa24.73■■□□□ 1.55
PCDHGC3-205ENST00000617641 TRAPPC8Q9Y2L5 1435 aa24.72■■□□□ 1.55
PCDHGC3-205ENST00000617641 TEX14Q8IWB6 1497 aa24.71■■□□□ 1.55
PCDHGC3-205ENST00000617641 NPM1P06748 294 aaKnown RBP eCLIP24.68■■□□□ 1.54
PCDHGC3-205ENST00000617641 FANCAO15360 1455 aa24.67■■□□□ 1.54
PCDHGC3-205ENST00000617641 DUOX2Q9NRD8 1548 aa24.65■■□□□ 1.54
PCDHGC3-205ENST00000617641 FAM135AQ9P2D6 1515 aa24.65■■□□□ 1.54
PCDHGC3-205ENST00000617641 UNC13BO14795 1591 aa24.64■■□□□ 1.54
PCDHGC3-205ENST00000617641 AFAP1Q8N556 730 aa24.62■■□□□ 1.53
PCDHGC3-205ENST00000617641 SPAG9O60271 1321 aaKnown RBP24.61■■□□□ 1.53
PCDHGC3-205ENST00000617641 DDX10Q13206 875 aaKnown RBP24.6■■□□□ 1.53
PCDHGC3-205ENST00000617641 NBPF8Q3BBV2 869 aa24.6■■□□□ 1.53
PCDHGC3-205ENST00000617641 ERBINQ96RT1 1412 aa24.59■■□□□ 1.53
PCDHGC3-205ENST00000617641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.59■■□□□ 1.53
PCDHGC3-205ENST00000617641 ZFYVE16Q7Z3T8 1539 aa24.58■■□□□ 1.53
PCDHGC3-205ENST00000617641 ADGRL1O94910 1474 aa24.57■■□□□ 1.52
PCDHGC3-205ENST00000617641 RTEL1-TNFRSF6BF6WH68 1400 aa24.57■■□□□ 1.52
PCDHGC3-205ENST00000617641 YTHDC1Q96MU7 727 aaKnown RBP24.56■■□□□ 1.52
PCDHGC3-205ENST00000617641 IQGAP3Q86VI3 1631 aa24.55■■□□□ 1.52
PCDHGC3-205ENST00000617641 SCAPERQ9BY12 1400 aa24.55■■□□□ 1.52
PCDHGC3-205ENST00000617641 HSPA5P11021 654 aaKnown RBP24.54■■□□□ 1.52
PCDHGC3-205ENST00000617641 MAGI2Q86UL8 1455 aa24.53■■□□□ 1.52
PCDHGC3-205ENST00000617641 INO80Q9ULG1 1556 aaPredicted RBP24.52■■□□□ 1.52
PCDHGC3-205ENST00000617641 ATP7AQ04656 1500 aa24.51■■□□□ 1.51
PCDHGC3-205ENST00000617641 CENPBP07199 599 aaPredicted RBP24.5■■□□□ 1.51
PCDHGC3-205ENST00000617641 EIF4G2P78344 907 aaKnown RBP eCLIP24.5■■□□□ 1.51
PCDHGC3-205ENST00000617641 CD109Q6YHK3 1445 aa24.49■■□□□ 1.51
PCDHGC3-205ENST00000617641 PLA2R1Q13018 1463 aa24.45■■□□□ 1.5
PCDHGC3-205ENST00000617641 ZNF326Q5BKZ1 582 aaKnown RBP24.44■■□□□ 1.5
PCDHGC3-205ENST00000617641 MYT1LQ9UL68 1186 aa24.44■■□□□ 1.5
PCDHGC3-205ENST00000617641 CYB5RLQ6IPT4 315 aa24.44■■□□□ 1.5
PCDHGC3-205ENST00000617641 PELP1Q8IZL8 1130 aaKnown RBP24.43■■□□□ 1.5
PCDHGC3-205ENST00000617641 RIMBP3CA6NJZ7 1639 aa24.43■■□□□ 1.5
PCDHGC3-205ENST00000617641 RIMBP3BA6NNM3 1639 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms