RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 CENPBP07199 599 aaPredicted RBP22.75■■□□□ 1.23
MBD1-227ENST00000592060 GPATCH8Q9UKJ3 1502 aaKnown RBP22.73■■□□□ 1.23
MBD1-227ENST00000592060 CAMSAP2Q08AD1 1489 aa22.73■■□□□ 1.23
MBD1-227ENST00000592060 SHROOM2Q13796 1616 aa22.73■■□□□ 1.23
MBD1-227ENST00000592060 CROCC2H7BZ55 1655 aa22.72■■□□□ 1.23
MBD1-227ENST00000592060 PPP1R15AO75807 674 aaPredicted RBP22.71■■□□□ 1.23
MBD1-227ENST00000592060 ATP10BO94823 1461 aa22.71■■□□□ 1.23
MBD1-227ENST00000592060 ADGBQ8N7X0 1667 aa22.7■■□□□ 1.22
MBD1-227ENST00000592060 ZNF644Q9H582 1327 aaPredicted RBP22.7■■□□□ 1.22
MBD1-227ENST00000592060 CDC42BPAQ5VT25 1732 aa22.69■■□□□ 1.22
MBD1-227ENST00000592060 KDM5BQ9UGL1 1544 aa22.69■■□□□ 1.22
MBD1-227ENST00000592060 TONSLQ96HA7 1378 aa22.68■■□□□ 1.22
MBD1-227ENST00000592060 ABCC10Q5T3U5 1492 aa22.67■■□□□ 1.22
MBD1-227ENST00000592060 ADGRL2O95490 1459 aa22.63■■□□□ 1.21
MBD1-227ENST00000592060 PTPRGP23470 1445 aa22.62■■□□□ 1.21
MBD1-227ENST00000592060 CFDP1Q9UEE9 299 aaPredicted RBP22.61■■□□□ 1.21
MBD1-227ENST00000592060 TRIM52Q96A61 297 aa22.59■■□□□ 1.21
MBD1-227ENST00000592060 PLEKHD1A6NEE1 506 aa22.58■■□□□ 1.2
MBD1-227ENST00000592060 YTHDC1Q96MU7 727 aaKnown RBP22.57■■□□□ 1.2
MBD1-227ENST00000592060 MPHOSPH9Q99550 1183 aa22.57■■□□□ 1.2
MBD1-227ENST00000592060 NCOA1Q15788 1441 aa22.56■■□□□ 1.2
MBD1-227ENST00000592060 SHANK2Q9UPX8 1470 aa22.54■■□□□ 1.2
MBD1-227ENST00000592060 ERCC6L2Q5T890 1561 aa22.53■■□□□ 1.2
MBD1-227ENST00000592060 CLASP1Q7Z460 1538 aa22.52■■□□□ 1.2
MBD1-227ENST00000592060 PREX2Q70Z35 1606 aa22.52■■□□□ 1.19
MBD1-227ENST00000592060 PZPP20742 1482 aa22.5■■□□□ 1.19
MBD1-227ENST00000592060 CDC42BPBQ9Y5S2 1711 aa22.49■■□□□ 1.19
MBD1-227ENST00000592060 ARHGEF5Q12774 1597 aa22.49■■□□□ 1.19
MBD1-227ENST00000592060 ANKRD30BQ9BXX2 1392 aa22.49■■□□□ 1.19
MBD1-227ENST00000592060 ABCC2Q92887 1545 aa22.49■■□□□ 1.19
MBD1-227ENST00000592060 ZNF777Q9ULD5 760 aaPredicted RBP22.49■■□□□ 1.19
MBD1-227ENST00000592060 RPRD2Q5VT52 1461 aaKnown RBP22.47■■□□□ 1.19
MBD1-227ENST00000592060 ANKRD30AQ9BXX3 1397 aa22.46■■□□□ 1.19
MBD1-227ENST00000592060 SAMD9LQ8IVG5 1584 aa22.46■■□□□ 1.19
MBD1-227ENST00000592060 C9orf84Q5VXU9 1444 aa22.44■■□□□ 1.18
MBD1-227ENST00000592060 GTF3C3Q9Y5Q9 886 aa22.44■■□□□ 1.18
MBD1-227ENST00000592060 TEX14Q8IWB6 1497 aa22.43■■□□□ 1.18
MBD1-227ENST00000592060 FOXD1Q16676 465 aa22.43■■□□□ 1.18
MBD1-227ENST00000592060 TTC37Q6PGP7 1564 aa22.42■■□□□ 1.18
MBD1-227ENST00000592060 MBD5Q9P267 1494 aa22.42■■□□□ 1.18
MBD1-227ENST00000592060 DDX10Q13206 875 aaKnown RBP22.4■■□□□ 1.18
MBD1-227ENST00000592060 ANKRD50Q9ULJ7 1429 aa22.4■■□□□ 1.18
MBD1-227ENST00000592060 HIRIP3Q9BW71 556 aaPredicted RBP22.39■■□□□ 1.18
MBD1-227ENST00000592060 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.39■■□□□ 1.17
MBD1-227ENST00000592060 SLC4A1APQ9BWU0 796 aaKnown RBP22.39■■□□□ 1.17
MBD1-227ENST00000592060 KDM5DQ9BY66 1539 aa22.38■■□□□ 1.17
MBD1-227ENST00000592060 MYO5CQ9NQX4 1742 aa22.36■■□□□ 1.17
MBD1-227ENST00000592060 CCDC141Q6ZP82 1450 aa22.36■■□□□ 1.17
MBD1-227ENST00000592060 ZCCHC11Q5TAX3 1644 aaKnown RBP22.36■■□□□ 1.17
MBD1-227ENST00000592060 L3MBTL2Q969R5 705 aa22.36■■□□□ 1.17
MBD1-227ENST00000592060 UHRF1BP1LA0JNW5 1464 aa22.35■■□□□ 1.17
MBD1-227ENST00000592060 KIAA1107Q9UPP5 1409 aa22.35■■□□□ 1.17
MBD1-227ENST00000592060 MAST1Q9Y2H9 1570 aa22.33■■□□□ 1.17
MBD1-227ENST00000592060 SYCP2Q9BX26 1530 aa22.31■■□□□ 1.16
MBD1-227ENST00000592060 ARHGAP5Q13017 1502 aa22.3■■□□□ 1.16
MBD1-227ENST00000592060 HNRNPMP52272 730 aaKnown RBP eCLIP22.3■■□□□ 1.16
MBD1-227ENST00000592060 KIF15Q9NS87 1388 aa22.29■■□□□ 1.16
MBD1-227ENST00000592060 TSPY4P0CV99 314 aa22.28■■□□□ 1.16
MBD1-227ENST00000592060 TSPY10P0CW01 314 aa22.28■■□□□ 1.16
MBD1-227ENST00000592060 HSPA5P11021 654 aaKnown RBP22.26■■□□□ 1.15
MBD1-227ENST00000592060 RSPH4AQ5TD94 716 aa22.25■■□□□ 1.15
MBD1-227ENST00000592060 PLXNC1O60486 1568 aa22.24■■□□□ 1.15
MBD1-227ENST00000592060 KCNH8Q96L42 1107 aa22.24■■□□□ 1.15
MBD1-227ENST00000592060 PLEKHH2Q8IVE3 1493 aa22.24■■□□□ 1.15
MBD1-227ENST00000592060 PKD2Q13563 968 aa22.23■■□□□ 1.15
MBD1-227ENST00000592060 NBPF8Q3BBV2 869 aa22.23■■□□□ 1.15
MBD1-227ENST00000592060 NUP155O75694 1391 aa22.23■■□□□ 1.15
MBD1-227ENST00000592060 EIF4G2P78344 907 aaKnown RBP eCLIP22.21■■□□□ 1.15
MBD1-227ENST00000592060 UNC13BO14795 1591 aa22.21■■□□□ 1.15
MBD1-227ENST00000592060 POLR1AO95602 1720 aaPredicted RBP22.21■■□□□ 1.15
MBD1-227ENST00000592060 CCER2I3L3R5 266 aa22.19■■□□□ 1.14
MBD1-227ENST00000592060 PLCH2O75038 1416 aa22.19■■□□□ 1.14
MBD1-227ENST00000592060 WASHC2AQ641Q2 1341 aa22.18■■□□□ 1.14
MBD1-227ENST00000592060 ARHGEF12Q9NZN5 1544 aa22.18■■□□□ 1.14
MBD1-227ENST00000592060 ANP32CO43423 234 aa22.17■■□□□ 1.14
MBD1-227ENST00000592060 SPATA31E1Q6ZUB1 1445 aa22.17■■□□□ 1.14
MBD1-227ENST00000592060 ABCC1P33527 1531 aa22.17■■□□□ 1.14
MBD1-227ENST00000592060 FAM135AQ9P2D6 1515 aa22.17■■□□□ 1.14
MBD1-227ENST00000592060 ARAP3Q8WWN8 1544 aa22.13■■□□□ 1.13
MBD1-227ENST00000592060 OSCARQ8IYS5 282 aa22.13■■□□□ 1.13
MBD1-227ENST00000592060 IQGAP3Q86VI3 1631 aa22.11■■□□□ 1.13
MBD1-227ENST00000592060 UHRF1BP1Q6BDS2 1440 aa22.11■■□□□ 1.13
MBD1-227ENST00000592060 DUOX2Q9NRD8 1548 aa22.1■■□□□ 1.13
MBD1-227ENST00000592060 CNTLNQ9NXG0 1405 aa22.1■■□□□ 1.13
MBD1-227ENST00000592060 CCDC7Q96M83 1385 aa22.1■■□□□ 1.13
MBD1-227ENST00000592060 MAGI2Q86UL8 1455 aa22.09■■□□□ 1.13
MBD1-227ENST00000592060 KDM5CP41229 1560 aa22.07■■□□□ 1.12
MBD1-227ENST00000592060 RALGAPBQ86X10 1494 aa22.06■■□□□ 1.12
MBD1-227ENST00000592060 WDR7Q9Y4E6 1490 aa22.06■■□□□ 1.12
MBD1-227ENST00000592060 C11orf95C9JLR9 678 aaPredicted RBP22.06■■□□□ 1.12
MBD1-227ENST00000592060 ERBINQ96RT1 1412 aa22.05■■□□□ 1.12
MBD1-227ENST00000592060 EFCAB2Q5VUJ9 269 aa22.05■■□□□ 1.12
MBD1-227ENST00000592060 ABCA9Q8IUA7 1624 aa22.04■■□□□ 1.12
MBD1-227ENST00000592060 TRAPPC8Q9Y2L5 1435 aa22.04■■□□□ 1.12
MBD1-227ENST00000592060 BCORL1Q5H9F3 1711 aa22.02■■□□□ 1.12
MBD1-227ENST00000592060 ZFYVE16Q7Z3T8 1539 aa22■■□□□ 1.11
MBD1-227ENST00000592060 USP47Q96K76 1375 aa21.99■■□□□ 1.11
MBD1-227ENST00000592060 PLA2R1Q13018 1463 aa21.99■■□□□ 1.11
MBD1-227ENST00000592060 KIF7Q2M1P5 1343 aa21.98■■□□□ 1.11
MBD1-227ENST00000592060 RTEL1-TNFRSF6BF6WH68 1400 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms