RNA–Protein interactions for RNA: ENST00000590099.5

BECN1-213, Transcript of beclin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BECN1, Length 2,087 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-213ENST00000590099 ROCK1Q13464 1354 aa23■■□□□ 1.27
BECN1-213ENST00000590099 ADCY10Q96PN6 1610 aa22.99■■□□□ 1.27
BECN1-213ENST00000590099 ABCC5O15440 1437 aa22.99■■□□□ 1.27
BECN1-213ENST00000590099 KDM5BQ9UGL1 1544 aa22.98■■□□□ 1.27
BECN1-213ENST00000590099 ZNF644Q9H582 1327 aaPredicted RBP22.98■■□□□ 1.27
BECN1-213ENST00000590099 ATP10BO94823 1461 aa22.98■■□□□ 1.27
BECN1-213ENST00000590099 DNMT1P26358 1616 aaKnown RBP22.98■■□□□ 1.27
BECN1-213ENST00000590099 DDX10Q13206 875 aaKnown RBP22.98■■□□□ 1.27
BECN1-213ENST00000590099 TRIM52Q96A61 297 aa22.97■■□□□ 1.27
BECN1-213ENST00000590099 CLASP1Q7Z460 1538 aa22.96■■□□□ 1.27
BECN1-213ENST00000590099 MPHOSPH9Q99550 1183 aa22.94■■□□□ 1.26
BECN1-213ENST00000590099 HIRIP3Q9BW71 556 aaPredicted RBP22.94■■□□□ 1.26
BECN1-213ENST00000590099 KIF14Q15058 1648 aa22.94■■□□□ 1.26
BECN1-213ENST00000590099 ERCC6L2Q5T890 1561 aa22.93■■□□□ 1.26
BECN1-213ENST00000590099 GPATCH8Q9UKJ3 1502 aaKnown RBP22.9■■□□□ 1.26
BECN1-213ENST00000590099 CFDP1Q9UEE9 299 aaPredicted RBP22.88■■□□□ 1.25
BECN1-213ENST00000590099 ITSN2Q9NZM3 1697 aa22.88■■□□□ 1.25
BECN1-213ENST00000590099 PLEKHD1A6NEE1 506 aa22.87■■□□□ 1.25
BECN1-213ENST00000590099 KCNH8Q96L42 1107 aa22.87■■□□□ 1.25
BECN1-213ENST00000590099 CAMSAP2Q08AD1 1489 aa22.87■■□□□ 1.25
BECN1-213ENST00000590099 ABCC10Q5T3U5 1492 aa22.86■■□□□ 1.25
BECN1-213ENST00000590099 ANKRD30BQ9BXX2 1392 aa22.82■■□□□ 1.24
BECN1-213ENST00000590099 FOXD1Q16676 465 aa22.81■■□□□ 1.24
BECN1-213ENST00000590099 PELP1Q8IZL8 1130 aaKnown RBP22.81■■□□□ 1.24
BECN1-213ENST00000590099 NCOA1Q15788 1441 aa22.8■■□□□ 1.24
BECN1-213ENST00000590099 ABCC2Q92887 1545 aa22.8■■□□□ 1.24
BECN1-213ENST00000590099 CDC42BPAQ5VT25 1732 aa22.79■■□□□ 1.24
BECN1-213ENST00000590099 L3MBTL2Q969R5 705 aa22.77■■□□□ 1.24
BECN1-213ENST00000590099 ADGRL2O95490 1459 aa22.77■■□□□ 1.24
BECN1-213ENST00000590099 ZNF777Q9ULD5 760 aaPredicted RBP22.77■■□□□ 1.23
BECN1-213ENST00000590099 RPRD2Q5VT52 1461 aaKnown RBP22.75■■□□□ 1.23
BECN1-213ENST00000590099 ADGBQ8N7X0 1667 aa22.75■■□□□ 1.23
BECN1-213ENST00000590099 SLC4A1APQ9BWU0 796 aaKnown RBP22.75■■□□□ 1.23
BECN1-213ENST00000590099 CROCC2H7BZ55 1655 aa22.74■■□□□ 1.23
BECN1-213ENST00000590099 CCER2I3L3R5 266 aa22.73■■□□□ 1.23
BECN1-213ENST00000590099 ANP32CO43423 234 aa22.72■■□□□ 1.23
BECN1-213ENST00000590099 PZPP20742 1482 aa22.72■■□□□ 1.23
BECN1-213ENST00000590099 UHRF1BP1LA0JNW5 1464 aa22.72■■□□□ 1.23
BECN1-213ENST00000590099 HSPA5P11021 654 aaKnown RBP22.7■■□□□ 1.23
BECN1-213ENST00000590099 ANKRD30AQ9BXX3 1397 aa22.69■■□□□ 1.22
BECN1-213ENST00000590099 TEX14Q8IWB6 1497 aa22.69■■□□□ 1.22
BECN1-213ENST00000590099 EIF4G2P78344 907 aaKnown RBP eCLIP22.67■■□□□ 1.22
BECN1-213ENST00000590099 WASHC2AQ641Q2 1341 aa22.65■■□□□ 1.22
BECN1-213ENST00000590099 PREX2Q70Z35 1606 aa22.65■■□□□ 1.22
BECN1-213ENST00000590099 SHANK2Q9UPX8 1470 aa22.65■■□□□ 1.22
BECN1-213ENST00000590099 NBPF8Q3BBV2 869 aa22.64■■□□□ 1.21
BECN1-213ENST00000590099 CDC42BPBQ9Y5S2 1711 aa22.64■■□□□ 1.21
BECN1-213ENST00000590099 ZCCHC11Q5TAX3 1644 aaKnown RBP22.64■■□□□ 1.21
BECN1-213ENST00000590099 ANKRD50Q9ULJ7 1429 aa22.63■■□□□ 1.21
BECN1-213ENST00000590099 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.62■■□□□ 1.21
BECN1-213ENST00000590099 TTC37Q6PGP7 1564 aa22.62■■□□□ 1.21
BECN1-213ENST00000590099 C9orf84Q5VXU9 1444 aa22.61■■□□□ 1.21
BECN1-213ENST00000590099 KIAA1107Q9UPP5 1409 aa22.61■■□□□ 1.21
BECN1-213ENST00000590099 ARHGEF5Q12774 1597 aa22.6■■□□□ 1.21
BECN1-213ENST00000590099 SAMD9LQ8IVG5 1584 aa22.59■■□□□ 1.21
BECN1-213ENST00000590099 MBD5Q9P267 1494 aa22.59■■□□□ 1.21
BECN1-213ENST00000590099 SUPT16HQ9Y5B9 1047 aaKnown RBP22.58■■□□□ 1.21
BECN1-213ENST00000590099 TSPY4P0CV99 314 aa22.57■■□□□ 1.2
BECN1-213ENST00000590099 TSPY10P0CW01 314 aa22.57■■□□□ 1.2
BECN1-213ENST00000590099 PKD2Q13563 968 aa22.57■■□□□ 1.2
BECN1-213ENST00000590099 HNRNPMP52272 730 aaKnown RBP eCLIP22.56■■□□□ 1.2
BECN1-213ENST00000590099 C11orf95C9JLR9 678 aaPredicted RBP22.54■■□□□ 1.2
BECN1-213ENST00000590099 SPATA31E1Q6ZUB1 1445 aa22.54■■□□□ 1.2
BECN1-213ENST00000590099 MYO5CQ9NQX4 1742 aa22.52■■□□□ 1.2
BECN1-213ENST00000590099 OSCARQ8IYS5 282 aa22.52■■□□□ 1.2
BECN1-213ENST00000590099 NUP155O75694 1391 aa22.52■■□□□ 1.2
BECN1-213ENST00000590099 ARHGAP5Q13017 1502 aa22.51■■□□□ 1.19
BECN1-213ENST00000590099 CCDC141Q6ZP82 1450 aa22.5■■□□□ 1.19
BECN1-213ENST00000590099 KDM5DQ9BY66 1539 aa22.5■■□□□ 1.19
BECN1-213ENST00000590099 CCDC7Q96M83 1385 aa22.5■■□□□ 1.19
BECN1-213ENST00000590099 KIF15Q9NS87 1388 aa22.5■■□□□ 1.19
BECN1-213ENST00000590099 RSPH4AQ5TD94 716 aa22.48■■□□□ 1.19
BECN1-213ENST00000590099 CNTLNQ9NXG0 1405 aa22.48■■□□□ 1.19
BECN1-213ENST00000590099 SYCP2Q9BX26 1530 aa22.47■■□□□ 1.19
BECN1-213ENST00000590099 PLCH2O75038 1416 aa22.47■■□□□ 1.19
BECN1-213ENST00000590099 PLEKHH2Q8IVE3 1493 aa22.44■■□□□ 1.18
BECN1-213ENST00000590099 MAST1Q9Y2H9 1570 aa22.44■■□□□ 1.18
BECN1-213ENST00000590099 WDR7Q9Y4E6 1490 aa22.41■■□□□ 1.18
BECN1-213ENST00000590099 KIF7Q2M1P5 1343 aa22.41■■□□□ 1.18
BECN1-213ENST00000590099 ARHGEF12Q9NZN5 1544 aa22.4■■□□□ 1.18
BECN1-213ENST00000590099 POLR1AO95602 1720 aaPredicted RBP22.39■■□□□ 1.18
BECN1-213ENST00000590099 UHRF1BP1Q6BDS2 1440 aa22.39■■□□□ 1.17
BECN1-213ENST00000590099 ARAP3Q8WWN8 1544 aa22.38■■□□□ 1.17
BECN1-213ENST00000590099 EFCAB2Q5VUJ9 269 aa22.37■■□□□ 1.17
BECN1-213ENST00000590099 PRKRIP1Q9H875 184 aaPredicted RBP22.36■■□□□ 1.17
BECN1-213ENST00000590099 ABCC1P33527 1531 aa22.36■■□□□ 1.17
BECN1-213ENST00000590099 FAM135AQ9P2D6 1515 aa22.34■■□□□ 1.17
BECN1-213ENST00000590099 ZNF326Q5BKZ1 582 aaKnown RBP22.34■■□□□ 1.17
BECN1-213ENST00000590099 USP47Q96K76 1375 aa22.34■■□□□ 1.17
BECN1-213ENST00000590099 PLXNC1O60486 1568 aa22.33■■□□□ 1.17
BECN1-213ENST00000590099 ABCA9Q8IUA7 1624 aa22.32■■□□□ 1.16
BECN1-213ENST00000590099 ASXL2Q76L83 1435 aa22.32■■□□□ 1.16
BECN1-213ENST00000590099 RALGAPBQ86X10 1494 aa22.31■■□□□ 1.16
BECN1-213ENST00000590099 KDM5CP41229 1560 aa22.31■■□□□ 1.16
BECN1-213ENST00000590099 CCDC184Q52MB2 194 aa22.3■■□□□ 1.16
BECN1-213ENST00000590099 BCORL1Q5H9F3 1711 aa22.29■■□□□ 1.16
BECN1-213ENST00000590099 TRAPPC8Q9Y2L5 1435 aa22.28■■□□□ 1.16
BECN1-213ENST00000590099 HNRNPUQ00839 825 aaKnown RBP eCLIP22.28■■□□□ 1.16
BECN1-213ENST00000590099 FKBP8Q14318 412 aa22.28■■□□□ 1.16
BECN1-213ENST00000590099 UNC13BO14795 1591 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms