RNA–Protein interactions for RNA: ENST00000563825.1

AC009117.3-202, humanhuman

TSL 4 BASIC

Gene AC009117.3, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009117.3-202ENST00000563825 FBXO22Q8NEZ5 403 aa8.84□□□□□ -0.99
AC009117.3-202ENST00000563825 MFRPQ9BY79 579 aa8.84□□□□□ -0.99
AC009117.3-202ENST00000563825 CHGAP10645 457 aaKnown RBP8.83□□□□□ -1
AC009117.3-202ENST00000563825 SLAIN1Q8ND83 568 aa8.82□□□□□ -1
AC009117.3-202ENST00000563825 SCRIBQ14160 1630 aa8.82□□□□□ -1
AC009117.3-202ENST00000563825 HS6ST3Q8IZP7 471 aa8.81□□□□□ -1
AC009117.3-202ENST00000563825 BOLA1Q9Y3E2 137 aa8.81□□□□□ -1
AC009117.3-202ENST00000563825 NLRP6P59044 892 aa8.8□□□□□ -1
AC009117.3-202ENST00000563825 TMEM121BQ9BXQ6 578 aaPredicted RBP8.8□□□□□ -1
AC009117.3-202ENST00000563825 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.79□□□□□ -1
AC009117.3-202ENST00000563825 MMRN1Q13201 1228 aa8.78□□□□□ -1
AC009117.3-202ENST00000563825 NKX1-1Q15270 411 aaPredicted RBP8.77□□□□□ -1.01
AC009117.3-202ENST00000563825 PPARGC1BQ86YN6 1023 aaKnown RBP8.77□□□□□ -1.01
AC009117.3-202ENST00000563825 PPP1R37O75864 691 aa8.76□□□□□ -1.01
AC009117.3-202ENST00000563825 SPNS2Q8IVW8 549 aa8.76□□□□□ -1.01
AC009117.3-202ENST00000563825 MICALL2Q8IY33 904 aa8.75□□□□□ -1.01
AC009117.3-202ENST00000563825 DNAJC5Q9H3Z4 198 aa8.75□□□□□ -1.01
AC009117.3-202ENST00000563825 C3orf67Q6ZVT6 689 aa8.74□□□□□ -1.01
AC009117.3-202ENST00000563825 TMEM92Q6UXU6 159 aa8.73□□□□□ -1.01
AC009117.3-202ENST00000563825 G3V3G9 751 aa8.72□□□□□ -1.01
AC009117.3-202ENST00000563825 CECR2Q9BXF3 1484 aa8.71□□□□□ -1.01
AC009117.3-202ENST00000563825 MROH2BQ7Z745 1585 aa8.7□□□□□ -1.02
AC009117.3-202ENST00000563825 FAM9AQ8IZU1 332 aaPredicted RBP8.69□□□□□ -1.02
AC009117.3-202ENST00000563825 BAZ1AQ9NRL2 1556 aaPredicted RBP8.66□□□□□ -1.02
AC009117.3-202ENST00000563825 SNPHO15079 494 aa8.66□□□□□ -1.02
AC009117.3-202ENST00000563825 GTPBP6O43824 516 aaPredicted RBP8.66□□□□□ -1.02
AC009117.3-202ENST00000563825 MARVELD3Q96A59 401 aa8.64□□□□□ -1.03
AC009117.3-202ENST00000563825 HOXB3P14651 431 aaPredicted RBP8.63□□□□□ -1.03
AC009117.3-202ENST00000563825 KIF3CO14782 793 aa8.61□□□□□ -1.03
AC009117.3-202ENST00000563825 EEA1Q15075 1411 aa8.61□□□□□ -1.03
AC009117.3-202ENST00000563825 BBXQ8WY36 941 aaPredicted RBP8.6□□□□□ -1.03
AC009117.3-202ENST00000563825 C2orf72A6NCS6 295 aa8.59□□□□□ -1.03
AC009117.3-202ENST00000563825 WRNQ14191 1432 aaPredicted RBP eCLIP8.59□□□□□ -1.03
AC009117.3-202ENST00000563825 TOP2AP11388 1531 aaKnown RBP8.58□□□□□ -1.04
AC009117.3-202ENST00000563825 WIZO95785 1651 aa8.57□□□□□ -1.04
AC009117.3-202ENST00000563825 TNIKQ9UKE5 1360 aa8.57□□□□□ -1.04
AC009117.3-202ENST00000563825 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.56□□□□□ -1.04
AC009117.3-202ENST00000563825 RYDENQ9NUL5 291 aaKnown RBP8.55□□□□□ -1.04
AC009117.3-202ENST00000563825 CCDC88BA6NC98 1476 aa8.55□□□□□ -1.04
AC009117.3-202ENST00000563825 EMP3P54852 163 aa8.54□□□□□ -1.04
AC009117.3-202ENST00000563825 EIF4G1Q04637 1599 aaKnown RBP8.53□□□□□ -1.04
AC009117.3-202ENST00000563825 PLCB2Q00722 1185 aa8.53□□□□□ -1.04
AC009117.3-202ENST00000563825 DOK7Q18PE1 504 aa8.52□□□□□ -1.05
AC009117.3-202ENST00000563825 CCER1Q8TC90 406 aaPredicted RBP8.52□□□□□ -1.05
AC009117.3-202ENST00000563825 TMC2Q8TDI7 906 aa8.52□□□□□ -1.05
AC009117.3-202ENST00000563825 KRTAP3-3Q9BYR6 98 aa8.52□□□□□ -1.05
AC009117.3-202ENST00000563825 KRTAP3-2Q9BYR7 98 aa8.52□□□□□ -1.05
AC009117.3-202ENST00000563825 SLC24A1O60721 1099 aa8.51□□□□□ -1.05
AC009117.3-202ENST00000563825 GPHNQ9NQX3 736 aaPredicted RBP8.51□□□□□ -1.05
AC009117.3-202ENST00000563825 SMARCA4P51532 1647 aa8.51□□□□□ -1.05
AC009117.3-202ENST00000563825 POTEB3A0JP26 581 aa8.5□□□□□ -1.05
AC009117.3-202ENST00000563825 GPR153Q6NV75 609 aa8.5□□□□□ -1.05
AC009117.3-202ENST00000563825 POTEBQ6S5H4 581 aa8.5□□□□□ -1.05
AC009117.3-202ENST00000563825 HS3ST6Q96QI5 342 aa8.5□□□□□ -1.05
AC009117.3-202ENST00000563825 HOXB1P14653 301 aaPredicted RBP8.49□□□□□ -1.05
AC009117.3-202ENST00000563825 CADPS2Q86UW7 1296 aa8.49□□□□□ -1.05
AC009117.3-202ENST00000563825 ZNF710Q8N1W2 664 aa8.49□□□□□ -1.05
AC009117.3-202ENST00000563825 NCKAP5LQ9HCH0 1330 aa8.49□□□□□ -1.05
AC009117.3-202ENST00000563825 CEP162Q5TB80 1403 aa8.48□□□□□ -1.05
AC009117.3-202ENST00000563825 DSG2Q14126 1118 aa8.48□□□□□ -1.05
AC009117.3-202ENST00000563825 ARSIQ5FYB1 569 aa8.48□□□□□ -1.05
AC009117.3-202ENST00000563825 SPRYD3Q8NCJ5 442 aa8.48□□□□□ -1.05
AC009117.3-202ENST00000563825 KHSRPQ92945 711 aaKnown RBP eCLIP8.48□□□□□ -1.05
AC009117.3-202ENST00000563825 CRISPLD2Q9H0B8 497 aa8.48□□□□□ -1.05
AC009117.3-202ENST00000563825 SMARCA2P51531 1590 aa8.48□□□□□ -1.05
AC009117.3-202ENST00000563825 FAM205CA6NFA0 338 aa8.47□□□□□ -1.05
AC009117.3-202ENST00000563825 FOXK1P85037 733 aa8.47□□□□□ -1.05
AC009117.3-202ENST00000563825 PAXIP1Q6ZW49 1069 aaPredicted RBP8.47□□□□□ -1.05
AC009117.3-202ENST00000563825 PLPP6Q8IY26 295 aa8.47□□□□□ -1.05
AC009117.3-202ENST00000563825 UBTFP17480 764 aaKnown RBP8.45□□□□□ -1.06
AC009117.3-202ENST00000563825 CFAP44Q96MT7 982 aa8.45□□□□□ -1.06
AC009117.3-202ENST00000563825 ZSWIM6Q9HCJ5 1215 aa8.45□□□□□ -1.06
AC009117.3-202ENST00000563825 SLC34A2O95436 690 aa8.44□□□□□ -1.06
AC009117.3-202ENST00000563825 PDE4AP27815 886 aa8.44□□□□□ -1.06
AC009117.3-202ENST00000563825 SOGA1O94964 1423 aa8.44□□□□□ -1.06
AC009117.3-202ENST00000563825 GOLGA3Q08378 1498 aa8.44□□□□□ -1.06
AC009117.3-202ENST00000563825 RIMBP2O15034 1052 aa8.43□□□□□ -1.06
AC009117.3-202ENST00000563825 PEG3Q9GZU2 1588 aa8.43□□□□□ -1.06
AC009117.3-202ENST00000563825 LARP6Q9BRS8 491 aaKnown RBP8.42□□□□□ -1.06
AC009117.3-202ENST00000563825 PCDHGA4Q9Y5G9 962 aa8.42□□□□□ -1.06
AC009117.3-202ENST00000563825 CENPBP07199 599 aaPredicted RBP8.41□□□□□ -1.06
AC009117.3-202ENST00000563825 CEP164Q9UPV0 1460 aa8.4□□□□□ -1.06
AC009117.3-202ENST00000563825 DIEXFQ68CQ4 756 aaKnown RBP8.4□□□□□ -1.06
AC009117.3-202ENST00000563825 PTCD2Q8WV60 388 aaKnown RBP8.4□□□□□ -1.06
AC009117.3-202ENST00000563825 ABCC8Q09428 1581 aa8.39□□□□□ -1.07
AC009117.3-202ENST00000563825 ACIN1Q9UKV3 1341 aaKnown RBP8.39□□□□□ -1.07
AC009117.3-202ENST00000563825 PPP1R15BQ5SWA1 713 aa8.39□□□□□ -1.07
AC009117.3-202ENST00000563825 ERBB3P21860 1342 aa8.38□□□□□ -1.07
AC009117.3-202ENST00000563825 KDM4FA0A1W2PPD8 638 aa8.38□□□□□ -1.07
AC009117.3-202ENST00000563825 NUDT7P0C024 238 aa8.38□□□□□ -1.07
AC009117.3-202ENST00000563825 HAP1P54257 671 aaPredicted RBP8.38□□□□□ -1.07
AC009117.3-202ENST00000563825 MFSD10Q14728 455 aa8.38□□□□□ -1.07
AC009117.3-202ENST00000563825 ZNF316A6NFI3 1004 aaPredicted RBP8.37□□□□□ -1.07
AC009117.3-202ENST00000563825 VARS2Q5ST30 1063 aaKnown RBP8.36□□□□□ -1.07
AC009117.3-202ENST00000563825 BAZ1BQ9UIG0 1483 aaKnown RBP8.36□□□□□ -1.07
AC009117.3-202ENST00000563825 ATAD2BQ9ULI0 1458 aa8.36□□□□□ -1.07
AC009117.3-202ENST00000563825 OXER1Q8TDS5 423 aa8.35□□□□□ -1.07
AC009117.3-202ENST00000563825 DDX27Q96GQ7 796 aaKnown RBP8.35□□□□□ -1.07
AC009117.3-202ENST00000563825 LHX6Q9UPM6 363 aa8.34□□□□□ -1.07
AC009117.3-202ENST00000563825 CLIP1P30622 1438 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms