RNA–Protein interactions for RNA: ENST00000555332.5

LINC01197-202, Transcript of long intergenic non-protein coding RNA 1197, humanhuman

TSL 3 BASIC

Gene LINC01197, Length 3,568 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01197-202ENST00000555332 PDE4DQ08499 809 aa6.97□□□□□ -1.29
LINC01197-202ENST00000555332 RYDENQ9NUL5 291 aaKnown RBP6.97□□□□□ -1.29
LINC01197-202ENST00000555332 A6NJR5 290 aa6.97□□□□□ -1.29
LINC01197-202ENST00000555332 PABPN1Q86U42 306 aaKnown RBP eCLIP6.97□□□□□ -1.29
LINC01197-202ENST00000555332 RNF39Q9H2S5 420 aa6.97□□□□□ -1.29
LINC01197-202ENST00000555332 CECR2Q9BXF3 1484 aa6.97□□□□□ -1.29
LINC01197-202ENST00000555332 KRI1Q8N9T8 703 aaKnown RBP6.97□□□□□ -1.29
LINC01197-202ENST00000555332 DCAF8L1A6NGE4 600 aa6.96□□□□□ -1.29
LINC01197-202ENST00000555332 BRD2P25440 801 aaKnown RBP6.96□□□□□ -1.29
LINC01197-202ENST00000555332 TRIM66O15016 1216 aa6.95□□□□□ -1.3
LINC01197-202ENST00000555332 VGFO15240 615 aaPredicted RBP6.94□□□□□ -1.3
LINC01197-202ENST00000555332 WDR62O43379 1518 aa6.94□□□□□ -1.3
LINC01197-202ENST00000555332 BAZ1AQ9NRL2 1556 aaPredicted RBP6.94□□□□□ -1.3
LINC01197-202ENST00000555332 PLEKHG3A1L390 1219 aa6.94□□□□□ -1.3
LINC01197-202ENST00000555332 ZNF692Q9BU19 519 aaPredicted RBP6.94□□□□□ -1.3
LINC01197-202ENST00000555332 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.93□□□□□ -1.3
LINC01197-202ENST00000555332 ZFP91Q96JP5 570 aaPredicted RBP6.93□□□□□ -1.3
LINC01197-202ENST00000555332 KIF21AQ7Z4S6 1674 aa6.92□□□□□ -1.3
LINC01197-202ENST00000555332 E2F4Q16254 413 aa6.92□□□□□ -1.3
LINC01197-202ENST00000555332 FAM9AQ8IZU1 332 aaPredicted RBP6.92□□□□□ -1.3
LINC01197-202ENST00000555332 CCDC97Q96F63 343 aaPredicted RBP6.92□□□□□ -1.3
LINC01197-202ENST00000555332 ZBTB47Q9UFB7 747 aaPredicted RBP6.92□□□□□ -1.3
LINC01197-202ENST00000555332 RSPH4AQ5TD94 716 aa6.91□□□□□ -1.3
LINC01197-202ENST00000555332 UBE2Q2Q8WVN8 375 aa6.9□□□□□ -1.3
LINC01197-202ENST00000555332 GSE1Q14687 1217 aa6.9□□□□□ -1.3
LINC01197-202ENST00000555332 RBM26Q5T8P6 1007 aaKnown RBP6.9□□□□□ -1.3
LINC01197-202ENST00000555332 SERPINA10Q9UK55 444 aa6.9□□□□□ -1.31
LINC01197-202ENST00000555332 ATAD2BQ9ULI0 1458 aa6.88□□□□□ -1.31
LINC01197-202ENST00000555332 PPM1GO15355 546 aaPredicted RBP6.88□□□□□ -1.31
LINC01197-202ENST00000555332 SMYD5Q6GMV2 418 aa6.88□□□□□ -1.31
LINC01197-202ENST00000555332 PROSER2Q86WR7 435 aaPredicted RBP6.87□□□□□ -1.31
LINC01197-202ENST00000555332 GPIHBP1Q8IV16 184 aa6.87□□□□□ -1.31
LINC01197-202ENST00000555332 POM121Q96HA1 1249 aa6.87□□□□□ -1.31
LINC01197-202ENST00000555332 MCM6Q14566 821 aa6.86□□□□□ -1.31
LINC01197-202ENST00000555332 DCAF8Q5TAQ9 597 aa6.85□□□□□ -1.31
LINC01197-202ENST00000555332 CWC22Q9HCG8 908 aaKnown RBP6.85□□□□□ -1.31
LINC01197-202ENST00000555332 MYT1LQ9UL68 1186 aa6.84□□□□□ -1.31
LINC01197-202ENST00000555332 FNBP4Q8N3X1 1017 aaPredicted RBP6.84□□□□□ -1.31
LINC01197-202ENST00000555332 DDRGK1Q96HY6 314 aa6.83□□□□□ -1.32
LINC01197-202ENST00000555332 UNCXA6NJT0 531 aa6.82□□□□□ -1.32
LINC01197-202ENST00000555332 NUBP1P53384 320 aa6.82□□□□□ -1.32
LINC01197-202ENST00000555332 SGIP1Q9BQI5 828 aa6.81□□□□□ -1.32
LINC01197-202ENST00000555332 MLLT3P42568 568 aaPredicted RBP6.8□□□□□ -1.32
LINC01197-202ENST00000555332 PLSCR2Q9NRY7 297 aa6.8□□□□□ -1.32
LINC01197-202ENST00000555332 AMOTL2Q9Y2J4 779 aa6.8□□□□□ -1.32
LINC01197-202ENST00000555332 CCDC125Q86Z20 511 aa6.8□□□□□ -1.32
LINC01197-202ENST00000555332 ARIH1Q9Y4X5 557 aaPredicted RBP6.79□□□□□ -1.32
LINC01197-202ENST00000555332 CCDC27Q2M243 656 aa6.78□□□□□ -1.32
LINC01197-202ENST00000555332 PARP9Q8IXQ6 854 aa6.77□□□□□ -1.33
LINC01197-202ENST00000555332 TOP2AP11388 1531 aaKnown RBP6.77□□□□□ -1.33
LINC01197-202ENST00000555332 C1QBPQ07021 282 aaKnown RBP6.77□□□□□ -1.33
LINC01197-202ENST00000555332 PDE4CQ08493 712 aa6.76□□□□□ -1.33
LINC01197-202ENST00000555332 IGSF5Q9NSI5 407 aa6.75□□□□□ -1.33
LINC01197-202ENST00000555332 CARNS1A5YM72 827 aa6.75□□□□□ -1.33
LINC01197-202ENST00000555332 SMARCA5O60264 1052 aaPredicted RBP6.74□□□□□ -1.33
LINC01197-202ENST00000555332 CERS3Q8IU89 383 aa6.74□□□□□ -1.33
LINC01197-202ENST00000555332 PPP1R37O75864 691 aa6.74□□□□□ -1.33
LINC01197-202ENST00000555332 GOPCQ9HD26 462 aa6.74□□□□□ -1.33
LINC01197-202ENST00000555332 SPINK5Q9NQ38 1064 aaPredicted RBP6.73□□□□□ -1.33
LINC01197-202ENST00000555332 ARID4BQ4LE39 1312 aaPredicted RBP6.73□□□□□ -1.33
LINC01197-202ENST00000555332 TAF7LQ5H9L4 462 aa6.73□□□□□ -1.33
LINC01197-202ENST00000555332 PCMTD1Q96MG8 357 aaPredicted RBP6.73□□□□□ -1.33
LINC01197-202ENST00000555332 SSUH2Q9Y2M2 353 aa6.73□□□□□ -1.33
LINC01197-202ENST00000555332 KCNA1Q09470 495 aa6.72□□□□□ -1.33
LINC01197-202ENST00000555332 BRPF3Q9ULD4 1205 aa6.72□□□□□ -1.33
LINC01197-202ENST00000555332 TARBP1Q13395 1621 aaKnown RBP6.72□□□□□ -1.33
LINC01197-202ENST00000555332 ZNF592Q92610 1267 aa6.72□□□□□ -1.33
LINC01197-202ENST00000555332 MFRPQ9BY79 579 aa6.72□□□□□ -1.33
LINC01197-202ENST00000555332 IVNS1ABPQ9Y6Y0 642 aa6.72□□□□□ -1.33
LINC01197-202ENST00000555332 BRD1O95696 1058 aa6.71□□□□□ -1.33
LINC01197-202ENST00000555332 PYGBP11216 843 aa6.71□□□□□ -1.33
LINC01197-202ENST00000555332 ACIN1Q9UKV3 1341 aaKnown RBP6.71□□□□□ -1.34
LINC01197-202ENST00000555332 CCDC102AQ96A19 550 aa6.71□□□□□ -1.34
LINC01197-202ENST00000555332 NCKAP5LQ9HCH0 1330 aa6.71□□□□□ -1.34
LINC01197-202ENST00000555332 ZNF330Q9Y3S2 320 aaPredicted RBP6.7□□□□□ -1.34
LINC01197-202ENST00000555332 CFTRP13569 1480 aa6.7□□□□□ -1.34
LINC01197-202ENST00000555332 PATL2C9JE40 543 aaKnown RBP6.7□□□□□ -1.34
LINC01197-202ENST00000555332 PPP1R15AO75807 674 aaPredicted RBP6.7□□□□□ -1.34
LINC01197-202ENST00000555332 FAM212AQ96EL1 285 aa6.7□□□□□ -1.34
LINC01197-202ENST00000555332 CHRM1P11229 460 aaPredicted RBP6.7□□□□□ -1.34
LINC01197-202ENST00000555332 COG6Q9Y2V7 657 aa6.7□□□□□ -1.34
LINC01197-202ENST00000555332 MROH2BQ7Z745 1585 aa6.7□□□□□ -1.34
LINC01197-202ENST00000555332 GPR37O15354 613 aa6.69□□□□□ -1.34
LINC01197-202ENST00000555332 KDM4AO75164 1064 aa6.69□□□□□ -1.34
LINC01197-202ENST00000555332 LARP6Q9BRS8 491 aaKnown RBP6.69□□□□□ -1.34
LINC01197-202ENST00000555332 SND1Q7KZF4 910 aaKnown RBP eCLIP6.69□□□□□ -1.34
LINC01197-202ENST00000555332 MRC2Q9UBG0 1479 aa6.69□□□□□ -1.34
LINC01197-202ENST00000555332 BAZ1BQ9UIG0 1483 aaKnown RBP6.68□□□□□ -1.34
LINC01197-202ENST00000555332 AMHR2Q16671 573 aa6.68□□□□□ -1.34
LINC01197-202ENST00000555332 KIAA1522Q9P206 1035 aaPredicted RBP6.68□□□□□ -1.34
LINC01197-202ENST00000555332 TTLL12Q14166 644 aaPredicted RBP6.67□□□□□ -1.34
LINC01197-202ENST00000555332 OSCARQ8IYS5 282 aa6.67□□□□□ -1.34
LINC01197-202ENST00000555332 ZBTB12Q9Y330 459 aaPredicted RBP6.67□□□□□ -1.34
LINC01197-202ENST00000555332 WIZO95785 1651 aa6.66□□□□□ -1.34
LINC01197-202ENST00000555332 MS4A1P11836 297 aa6.66□□□□□ -1.34
LINC01197-202ENST00000555332 SHROOM2Q13796 1616 aa6.66□□□□□ -1.34
LINC01197-202ENST00000555332 IRX6P78412 446 aaPredicted RBP6.65□□□□□ -1.34
LINC01197-202ENST00000555332 TMED8Q6PL24 325 aaPredicted RBP6.65□□□□□ -1.34
LINC01197-202ENST00000555332 SPATA32Q96LK8 384 aa6.65□□□□□ -1.34
LINC01197-202ENST00000555332 PSMD1Q99460 953 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms