RNA–Protein interactions for RNA: ENST00000545081.5

NLRC5-228, Transcript of NLR family CARD domain containing 5, humanhuman

TSL 2

Gene NLRC5, Length 5,832 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC5-228ENST00000545081 SIN3AQ96ST3 1273 aa16.36■□□□□ 0.21
NLRC5-228ENST00000545081 HTATSF1O43719 755 aaKnown RBP16.36■□□□□ 0.21
NLRC5-228ENST00000545081 CSB-PGBD3P0DP91 1061 aa16.35■□□□□ 0.21
NLRC5-228ENST00000545081 IPO8O15397 1037 aaKnown RBP16.35■□□□□ 0.21
NLRC5-228ENST00000545081 CEP162Q5TB80 1403 aa16.34■□□□□ 0.21
NLRC5-228ENST00000545081 PTMSP20962 102 aa16.34■□□□□ 0.21
NLRC5-228ENST00000545081 TPM4P67936 248 aa16.34■□□□□ 0.21
NLRC5-228ENST00000545081 HDGFL2Q7Z4V5 671 aaPredicted RBP16.33■□□□□ 0.2
NLRC5-228ENST00000545081 GBP4Q96PP9 640 aa16.33■□□□□ 0.2
NLRC5-228ENST00000545081 PAK3O75914 559 aaPredicted RBP16.33■□□□□ 0.2
NLRC5-228ENST00000545081 CCNB3Q8WWL7 1395 aa16.32■□□□□ 0.2
NLRC5-228ENST00000545081 PDE4CQ08493 712 aa16.32■□□□□ 0.2
NLRC5-228ENST00000545081 GORABQ5T7V8 394 aa16.31■□□□□ 0.2
NLRC5-228ENST00000545081 HSP90B1P14625 803 aaKnown RBP16.31■□□□□ 0.2
NLRC5-228ENST00000545081 A0A0U1RQG5 324 aaPredicted RBP16.31■□□□□ 0.2
NLRC5-228ENST00000545081 STK26Q9P289 416 aa16.3■□□□□ 0.2
NLRC5-228ENST00000545081 EEA1Q15075 1411 aa16.29■□□□□ 0.2
NLRC5-228ENST00000545081 CALD1Q05682 793 aaKnown RBP16.29■□□□□ 0.2
NLRC5-228ENST00000545081 ITPRIPQ8IWB1 547 aa16.29■□□□□ 0.2
NLRC5-228ENST00000545081 SYAP1Q96A49 352 aaPredicted RBP16.28■□□□□ 0.2
NLRC5-228ENST00000545081 CCDC34Q96HJ3 373 aa16.28■□□□□ 0.2
NLRC5-228ENST00000545081 CHMP3Q9Y3E7 222 aa16.28■□□□□ 0.2
NLRC5-228ENST00000545081 TAF7LQ5H9L4 462 aa16.27■□□□□ 0.2
NLRC5-228ENST00000545081 RASSF8Q8NHQ8 419 aa16.27■□□□□ 0.2
NLRC5-228ENST00000545081 G3V3G9 751 aa16.26■□□□□ 0.19
NLRC5-228ENST00000545081 DCAF8Q5TAQ9 597 aa16.26■□□□□ 0.19
NLRC5-228ENST00000545081 GPATCH3Q96I76 525 aa16.26■□□□□ 0.19
NLRC5-228ENST00000545081 CCDC9Q9Y3X0 531 aaKnown RBP16.26■□□□□ 0.19
NLRC5-228ENST00000545081 RWDD1Q9H446 243 aaPredicted RBP16.26■□□□□ 0.19
NLRC5-228ENST00000545081 ARID3AQ99856 593 aa16.25■□□□□ 0.19
NLRC5-228ENST00000545081 KIF27Q86VH2 1401 aa16.25■□□□□ 0.19
NLRC5-228ENST00000545081 DEKP35659 375 aaKnown RBP16.25■□□□□ 0.19
NLRC5-228ENST00000545081 GOLGA6L1Q8N7Z2 621 aa16.25■□□□□ 0.19
NLRC5-228ENST00000545081 GZF1Q9H116 711 aaPredicted RBP16.25■□□□□ 0.19
NLRC5-228ENST00000545081 ERCC6Q03468 1493 aa16.24■□□□□ 0.19
NLRC5-228ENST00000545081 KTN1Q86UP2 1357 aaKnown RBP16.24■□□□□ 0.19
NLRC5-228ENST00000545081 U2AF1L5P0DN76 240 aaPredicted RBP16.23■□□□□ 0.19
NLRC5-228ENST00000545081 U2AF1Q01081 240 aaKnown RBP eCLIP16.23■□□□□ 0.19
NLRC5-228ENST00000545081 STK31Q9BXU1 1019 aa16.23■□□□□ 0.19
NLRC5-228ENST00000545081 CREBRFQ8IUR6 639 aa16.23■□□□□ 0.19
NLRC5-228ENST00000545081 TNNT3P45378 269 aaPredicted RBP16.22■□□□□ 0.19
NLRC5-228ENST00000545081 CHMP4AQ9BY43 222 aa16.22■□□□□ 0.19
NLRC5-228ENST00000545081 GGT6Q6P531 493 aa16.22■□□□□ 0.19
NLRC5-228ENST00000545081 CEP89Q96ST8 783 aa16.22■□□□□ 0.19
NLRC5-228ENST00000545081 TRIM6-TRIM34B2RNG4 842 aa16.21■□□□□ 0.19
NLRC5-228ENST00000545081 SPAG9O60271 1321 aaKnown RBP16.21■□□□□ 0.19
NLRC5-228ENST00000545081 SLKQ9H2G2 1235 aaPredicted RBP16.2■□□□□ 0.18
NLRC5-228ENST00000545081 CSPP1Q1MSJ5 1256 aa16.19■□□□□ 0.18
NLRC5-228ENST00000545081 VPS53Q5VIR6 699 aa16.19■□□□□ 0.18
NLRC5-228ENST00000545081 HDAC5Q9UQL6 1122 aa16.18■□□□□ 0.18
NLRC5-228ENST00000545081 WRNQ14191 1432 aaPredicted RBP eCLIP16.18■□□□□ 0.18
NLRC5-228ENST00000545081 MARCH6O60337 910 aa16.18■□□□□ 0.18
NLRC5-228ENST00000545081 MFAP1P55081 439 aaKnown RBP16.18■□□□□ 0.18
NLRC5-228ENST00000545081 TOMM22Q9NS69 142 aa16.17■□□□□ 0.18
NLRC5-228ENST00000545081 EIF4G1Q04637 1599 aaKnown RBP16.17■□□□□ 0.18
NLRC5-228ENST00000545081 HMMRO75330 724 aa16.16■□□□□ 0.18
NLRC5-228ENST00000545081 PMFBP1Q8TBY8 1022 aa16.16■□□□□ 0.18
NLRC5-228ENST00000545081 CEP164Q9UPV0 1460 aa16.16■□□□□ 0.18
NLRC5-228ENST00000545081 TPM3P06753 285 aa16.16■□□□□ 0.18
NLRC5-228ENST00000545081 USP35Q9P2H5 1018 aa16.16■□□□□ 0.18
NLRC5-228ENST00000545081 HSPA5P11021 654 aaKnown RBP16.15■□□□□ 0.18
NLRC5-228ENST00000545081 RCAN3Q9UKA8 241 aa16.15■□□□□ 0.18
NLRC5-228ENST00000545081 FRAT2O75474 233 aaPredicted RBP16.14■□□□□ 0.18
NLRC5-228ENST00000545081 CCER2I3L3R5 266 aa16.14■□□□□ 0.17
NLRC5-228ENST00000545081 NOL8Q76FK4 1167 aaKnown RBP16.14■□□□□ 0.17
NLRC5-228ENST00000545081 GOLGA6L3A6NEY3 463 aa16.13■□□□□ 0.17
NLRC5-228ENST00000545081 SLC4A10Q6U841 1118 aa16.13■□□□□ 0.17
NLRC5-228ENST00000545081 SMC4Q9NTJ3 1288 aa16.13■□□□□ 0.17
NLRC5-228ENST00000545081 TNIKQ9UKE5 1360 aa16.12■□□□□ 0.17
NLRC5-228ENST00000545081 GTF2E1P29083 439 aaPredicted RBP16.11■□□□□ 0.17
NLRC5-228ENST00000545081 ANO8Q9HCE9 1232 aaPredicted RBP16.11■□□□□ 0.17
NLRC5-228ENST00000545081 ROCK2O75116 1388 aaKnown RBP16.11■□□□□ 0.17
NLRC5-228ENST00000545081 TCERG1O14776 1098 aaKnown RBP16.11■□□□□ 0.17
NLRC5-228ENST00000545081 PKD2Q13563 968 aa16.11■□□□□ 0.17
NLRC5-228ENST00000545081 FHAD1B1AJZ9 1412 aa16.1■□□□□ 0.17
NLRC5-228ENST00000545081 BAZ1BQ9UIG0 1483 aaKnown RBP16.1■□□□□ 0.17
NLRC5-228ENST00000545081 SF3A1Q15459 793 aaKnown RBP16.1■□□□□ 0.17
NLRC5-228ENST00000545081 FOXD4L1Q9NU39 408 aa16.1■□□□□ 0.17
NLRC5-228ENST00000545081 RBM19Q9Y4C8 960 aaKnown RBP16.1■□□□□ 0.17
NLRC5-228ENST00000545081 KIF16BQ96L93 1317 aa16.09■□□□□ 0.17
NLRC5-228ENST00000545081 PES1O00541 588 aaKnown RBP16.09■□□□□ 0.17
NLRC5-228ENST00000545081 RALBP1Q15311 655 aa16.09■□□□□ 0.17
NLRC5-228ENST00000545081 KIF3AQ9Y496 699 aa16.08■□□□□ 0.17
NLRC5-228ENST00000545081 TPD52L1Q16890 204 aaPredicted RBP16.08■□□□□ 0.16
NLRC5-228ENST00000545081 PHF14O94880 888 aa16.07■□□□□ 0.16
NLRC5-228ENST00000545081 TIMELESSQ9UNS1 1208 aa16.07■□□□□ 0.16
NLRC5-228ENST00000545081 EIF3AQ14152 1382 aaKnown RBP16.07■□□□□ 0.16
NLRC5-228ENST00000545081 TERF2IPQ9NYB0 399 aa16.06■□□□□ 0.16
NLRC5-228ENST00000545081 NGDNQ8NEJ9 315 aaKnown RBP16.05■□□□□ 0.16
NLRC5-228ENST00000545081 ST18O60284 1047 aa16.05■□□□□ 0.16
NLRC5-228ENST00000545081 AMPHP49418 695 aa16.05■□□□□ 0.16
NLRC5-228ENST00000545081 TSR1Q2NL82 804 aaKnown RBP16.05■□□□□ 0.16
NLRC5-228ENST00000545081 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.05■□□□□ 0.16
NLRC5-228ENST00000545081 LMOD3Q0VAK6 560 aa16.04■□□□□ 0.16
NLRC5-228ENST00000545081 H3BQV1 296 aa16.04■□□□□ 0.16
NLRC5-228ENST00000545081 IFFO2Q5TF58 517 aa16.04■□□□□ 0.16
NLRC5-228ENST00000545081 WWC1Q8IX03 1113 aa16.04■□□□□ 0.16
NLRC5-228ENST00000545081 FOXD4L5Q5VV16 416 aaPredicted RBP16.04■□□□□ 0.16
NLRC5-228ENST00000545081 FOXD4L4Q8WXT5 416 aaPredicted RBP16.04■□□□□ 0.16
NLRC5-228ENST00000545081 CCDC180Q9P1Z9 1646 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms