RNA–Protein interactions for RNA: ENST00000526913.5

KNL1-203, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,584 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-203ENST00000526913 CCDC61Q9Y6R9 512 aa2.55□□□□□ -2
KNL1-203ENST00000526913 ILDR1Q86SU0 546 aaPredicted RBP2.54□□□□□ -2
KNL1-203ENST00000526913 RSPH6AQ9H0K4 717 aa2.54□□□□□ -2
KNL1-203ENST00000526913 ZNF316A6NFI3 1004 aaPredicted RBP2.54□□□□□ -2
KNL1-203ENST00000526913 PITPNM1O00562 1244 aa2.54□□□□□ -2
KNL1-203ENST00000526913 PLEKHG5O94827 1062 aa2.54□□□□□ -2
KNL1-203ENST00000526913 PSEN1P49768 467 aa2.54□□□□□ -2
KNL1-203ENST00000526913 PARP9Q8IXQ6 854 aa2.54□□□□□ -2
KNL1-203ENST00000526913 NLRP7Q8WX94 980 aa2.54□□□□□ -2
KNL1-203ENST00000526913 CRISPLD2Q9H0B8 497 aa2.54□□□□□ -2
KNL1-203ENST00000526913 DPYSL4O14531 572 aa2.54□□□□□ -2
KNL1-203ENST00000526913 PRR29P0C7W0 189 aa2.54□□□□□ -2
KNL1-203ENST00000526913 MS4A1P11836 297 aa2.53□□□□□ -2
KNL1-203ENST00000526913 GPIHBP1Q8IV16 184 aa2.53□□□□□ -2
KNL1-203ENST00000526913 REM2Q8IYK8 340 aaPredicted RBP2.53□□□□□ -2
KNL1-203ENST00000526913 PHOX2BQ99453 314 aa2.53□□□□□ -2
KNL1-203ENST00000526913 MAP3K13O43283 966 aa2.53□□□□□ -2
KNL1-203ENST00000526913 FOXD4L5Q5VV16 416 aaPredicted RBP2.52□□□□□ -2.01
KNL1-203ENST00000526913 FOXD4L4Q8WXT5 416 aaPredicted RBP2.52□□□□□ -2.01
KNL1-203ENST00000526913 DPY19L2Q6NUT2 758 aa2.52□□□□□ -2.01
KNL1-203ENST00000526913 AK7Q96M32 723 aa2.52□□□□□ -2.01
KNL1-203ENST00000526913 ZNF777Q9ULD5 760 aaPredicted RBP2.52□□□□□ -2.01
KNL1-203ENST00000526913 CCDC102AQ96A19 550 aa2.52□□□□□ -2.01
KNL1-203ENST00000526913 CAMK2BQ13554 666 aa2.52□□□□□ -2.01
KNL1-203ENST00000526913 IRF5Q13568 498 aa2.52□□□□□ -2.01
KNL1-203ENST00000526913 CLCN6P51797 869 aa2.51□□□□□ -2.01
KNL1-203ENST00000526913 PDAP1Q13442 181 aaKnown RBP2.51□□□□□ -2.01
KNL1-203ENST00000526913 MFSD10Q14728 455 aa2.51□□□□□ -2.01
KNL1-203ENST00000526913 FAM161AQ3B820 660 aa2.51□□□□□ -2.01
KNL1-203ENST00000526913 ERICH6Q7L0X2 663 aa2.51□□□□□ -2.01
KNL1-203ENST00000526913 KRI1Q8N9T8 703 aaKnown RBP2.51□□□□□ -2.01
KNL1-203ENST00000526913 DDX27Q96GQ7 796 aaKnown RBP2.51□□□□□ -2.01
KNL1-203ENST00000526913 RBM42Q9BTD8 480 aaKnown RBP2.51□□□□□ -2.01
KNL1-203ENST00000526913 POTEIP0CG38 1075 aa2.51□□□□□ -2.01
KNL1-203ENST00000526913 POTEJP0CG39 1038 aa2.51□□□□□ -2.01
KNL1-203ENST00000526913 RANGAP1P46060 587 aaPredicted RBP2.5□□□□□ -2.01
KNL1-203ENST00000526913 DSG2Q14126 1118 aa2.5□□□□□ -2.01
KNL1-203ENST00000526913 MTMR7Q9Y216 660 aa2.5□□□□□ -2.01
KNL1-203ENST00000526913 PROCA1Q8NCQ7 364 aaPredicted RBP2.5□□□□□ -2.01
KNL1-203ENST00000526913 MCM6Q14566 821 aa2.5□□□□□ -2.01
KNL1-203ENST00000526913 OXER1Q8TDS5 423 aa2.5□□□□□ -2.01
KNL1-203ENST00000526913 FNBP4Q8N3X1 1017 aaPredicted RBP2.49□□□□□ -2.01
KNL1-203ENST00000526913 TRAK2O60296 914 aa2.49□□□□□ -2.01
KNL1-203ENST00000526913 RGS22Q8NE09 1264 aa2.49□□□□□ -2.01
KNL1-203ENST00000526913 SPDYE1Q8NFV5 336 aaPredicted RBP2.49□□□□□ -2.01
KNL1-203ENST00000526913 GRXCR2A6NFK2 248 aa2.49□□□□□ -2.01
KNL1-203ENST00000526913 RETREG2Q8NC44 543 aa2.49□□□□□ -2.01
KNL1-203ENST00000526913 AEBP1Q8IUX7 1158 aa2.48□□□□□ -2.01
KNL1-203ENST00000526913 PHF12Q96QT6 1004 aa2.48□□□□□ -2.01
KNL1-203ENST00000526913 FARP1Q9Y4F1 1045 aaPredicted RBP2.48□□□□□ -2.01
KNL1-203ENST00000526913 KCTD17Q8N5Z5 321 aa2.48□□□□□ -2.01
KNL1-203ENST00000526913 CDHR5Q9HBB8 845 aa2.48□□□□□ -2.01
KNL1-203ENST00000526913 OSBPP22059 807 aa2.48□□□□□ -2.01
KNL1-203ENST00000526913 KIF12Q96FN5 646 aa2.48□□□□□ -2.01
KNL1-203ENST00000526913 DDX12PQ92771 950 aa2.47□□□□□ -2.01
KNL1-203ENST00000526913 PPP1R15BQ5SWA1 713 aa2.47□□□□□ -2.01
KNL1-203ENST00000526913 RYDENQ9NUL5 291 aaKnown RBP2.47□□□□□ -2.01
KNL1-203ENST00000526913 ARIH1Q9Y4X5 557 aaPredicted RBP2.47□□□□□ -2.01
KNL1-203ENST00000526913 IRF6O14896 467 aa2.47□□□□□ -2.01
KNL1-203ENST00000526913 GIGYF2Q6Y7W6 1299 aaKnown RBP2.47□□□□□ -2.01
KNL1-203ENST00000526913 ZNF467Q7Z7K2 595 aaPredicted RBP2.47□□□□□ -2.01
KNL1-203ENST00000526913 POM121CA8CG34 1229 aa2.47□□□□□ -2.01
KNL1-203ENST00000526913 PDIA4P13667 645 aaKnown RBP2.47□□□□□ -2.01
KNL1-203ENST00000526913 SNRKQ9NRH2 765 aa2.47□□□□□ -2.01
KNL1-203ENST00000526913 PDIA6Q15084 440 aa2.47□□□□□ -2.01
KNL1-203ENST00000526913 C19orf67A6NJJ6 358 aa2.46□□□□□ -2.02
KNL1-203ENST00000526913 TMEM92Q6UXU6 159 aa2.46□□□□□ -2.02
KNL1-203ENST00000526913 ZNF579Q8NAF0 562 aaKnown RBP2.46□□□□□ -2.02
KNL1-203ENST00000526913 NLRP6P59044 892 aa2.46□□□□□ -2.02
KNL1-203ENST00000526913 RAD21O60216 631 aa2.46□□□□□ -2.02
KNL1-203ENST00000526913 AMHR2Q16671 573 aa2.46□□□□□ -2.02
KNL1-203ENST00000526913 UPF1Q92900 1129 aaKnown RBP eCLIP2.46□□□□□ -2.024e-20■■■■■ 34.9
KNL1-203ENST00000526913 POLR3EQ9NVU0 708 aa2.46□□□□□ -2.02
KNL1-203ENST00000526913 NUTM2FA1L443 756 aa2.45□□□□□ -2.02
KNL1-203ENST00000526913 TTLL12Q14166 644 aaPredicted RBP2.45□□□□□ -2.02
KNL1-203ENST00000526913 POTEB2H3BUK9 544 aa2.45□□□□□ -2.02
KNL1-203ENST00000526913 NPDC1Q9NQX5 325 aaPredicted RBP2.45□□□□□ -2.02
KNL1-203ENST00000526913 PDE4AP27815 886 aa2.45□□□□□ -2.02
KNL1-203ENST00000526913 ADAMTS19Q8TE59 1207 aa2.45□□□□□ -2.02
KNL1-203ENST00000526913 GPHNQ9NQX3 736 aaPredicted RBP2.45□□□□□ -2.02
KNL1-203ENST00000526913 MAP2K5Q13163 448 aa2.44□□□□□ -2.02
KNL1-203ENST00000526913 TSR1Q2NL82 804 aaKnown RBP2.44□□□□□ -2.02
KNL1-203ENST00000526913 PLSCR2Q9NRY7 297 aa2.44□□□□□ -2.02
KNL1-203ENST00000526913 COG6Q9Y2V7 657 aa2.44□□□□□ -2.02
KNL1-203ENST00000526913 PROSER2Q86WR7 435 aaPredicted RBP2.44□□□□□ -2.02
KNL1-203ENST00000526913 GZF1Q9H116 711 aaPredicted RBP2.44□□□□□ -2.02
KNL1-203ENST00000526913 PRKAR2AP13861 404 aaKnown RBP2.44□□□□□ -2.02
KNL1-203ENST00000526913 RBM25P49756 843 aaKnown RBP2.44□□□□□ -2.02
KNL1-203ENST00000526913 C2orf72A6NCS6 295 aa2.43□□□□□ -2.02
KNL1-203ENST00000526913 C3orf80F5H4A9 247 aa2.43□□□□□ -2.02
KNL1-203ENST00000526913 GPR37L1O60883 481 aa2.43□□□□□ -2.02
KNL1-203ENST00000526913 PTGDRQ13258 359 aa2.43□□□□□ -2.02
KNL1-203ENST00000526913 SOX12O15370 315 aa2.43□□□□□ -2.02
KNL1-203ENST00000526913 TMUB1Q9BVT8 246 aa2.43□□□□□ -2.02
KNL1-203ENST00000526913 CCDC9Q9Y3X0 531 aaKnown RBP2.43□□□□□ -2.02
KNL1-203ENST00000526913 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.43□□□□□ -2.02
KNL1-203ENST00000526913 MDM2Q00987 491 aaPredicted RBP2.43□□□□□ -2.02
KNL1-203ENST00000526913 TMEM106CQ9BVX2 250 aa2.43□□□□□ -2.02
KNL1-203ENST00000526913 ZBTB7CA1YPR0 619 aa2.43□□□□□ -2.02
KNL1-203ENST00000526913 POTEFA5A3E0 1075 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms