RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 OTUD5Q96G74 571 aa9.06□□□□□ -0.96
SDC2-208ENST00000523877 NEFMP07197 916 aa9.05□□□□□ -0.96
SDC2-208ENST00000523877 DNAJC5Q9H3Z4 198 aa9.05□□□□□ -0.96
SDC2-208ENST00000523877 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.05□□□□□ -0.96
SDC2-208ENST00000523877 PTMAP06454 111 aaKnown RBP9.04□□□□□ -0.96
SDC2-208ENST00000523877 MCCP23508 829 aa9.04□□□□□ -0.96
SDC2-208ENST00000523877 CNPY4Q8N129 248 aa9.04□□□□□ -0.96
SDC2-208ENST00000523877 PAK3O75914 559 aaPredicted RBP9.03□□□□□ -0.96
SDC2-208ENST00000523877 PROM2Q8N271 834 aa9.03□□□□□ -0.96
SDC2-208ENST00000523877 GRIPAP1Q4V328 841 aa9.01□□□□□ -0.97
SDC2-208ENST00000523877 NECTIN2Q92692 538 aa9.01□□□□□ -0.97
SDC2-208ENST00000523877 TMED8Q6PL24 325 aaPredicted RBP8.99□□□□□ -0.97
SDC2-208ENST00000523877 FTSJ3Q8IY81 847 aaKnown RBP8.99□□□□□ -0.97
SDC2-208ENST00000523877 CWC22Q9HCG8 908 aaKnown RBP8.99□□□□□ -0.97
SDC2-208ENST00000523877 RAD21O60216 631 aa8.98□□□□□ -0.97
SDC2-208ENST00000523877 RTL5Q5HYW3 569 aaPredicted RBP8.98□□□□□ -0.97
SDC2-208ENST00000523877 MS4A3Q96HJ5 214 aa8.98□□□□□ -0.97
SDC2-208ENST00000523877 PRDM10Q9NQV6 1147 aa8.97□□□□□ -0.97
SDC2-208ENST00000523877 NEUROD1Q13562 356 aa8.96□□□□□ -0.98
SDC2-208ENST00000523877 WWC1Q8IX03 1113 aa8.95□□□□□ -0.98
SDC2-208ENST00000523877 KCTD17Q8N5Z5 321 aa8.95□□□□□ -0.98
SDC2-208ENST00000523877 MAFGO15525 162 aa8.94□□□□□ -0.98
SDC2-208ENST00000523877 ATMINO43313 823 aaPredicted RBP8.94□□□□□ -0.98
SDC2-208ENST00000523877 ASTLQ6HA08 431 aaPredicted RBP8.94□□□□□ -0.98
SDC2-208ENST00000523877 FAM177A1Q8N128 213 aaPredicted RBP8.94□□□□□ -0.98
SDC2-208ENST00000523877 SECISBP2LQ93073 1101 aaKnown RBP8.94□□□□□ -0.98
SDC2-208ENST00000523877 PRDM16Q9HAZ2 1276 aa8.94□□□□□ -0.98
SDC2-208ENST00000523877 PLSCR2Q9NRY7 297 aa8.94□□□□□ -0.98
SDC2-208ENST00000523877 USP35Q9P2H5 1018 aa8.94□□□□□ -0.98
SDC2-208ENST00000523877 PPM1GO15355 546 aaPredicted RBP8.93□□□□□ -0.98
SDC2-208ENST00000523877 POTEJP0CG39 1038 aa8.93□□□□□ -0.98
SDC2-208ENST00000523877 ANAPC15P60006 121 aa8.93□□□□□ -0.98
SDC2-208ENST00000523877 ZNF526Q8TF50 670 aaPredicted RBP8.93□□□□□ -0.98
SDC2-208ENST00000523877 BBXQ8WY36 941 aaPredicted RBP8.92□□□□□ -0.98
SDC2-208ENST00000523877 DNAJC2Q99543 621 aaKnown RBP8.92□□□□□ -0.98
SDC2-208ENST00000523877 RBM25P49756 843 aaKnown RBP8.91□□□□□ -0.98
SDC2-208ENST00000523877 TSPYL2Q9H2G4 693 aaPredicted RBP8.91□□□□□ -0.98
SDC2-208ENST00000523877 METRNQ9UJH8 293 aa8.91□□□□□ -0.98
SDC2-208ENST00000523877 CNGB1Q14028 1251 aaPredicted RBP8.9□□□□□ -0.98
SDC2-208ENST00000523877 GPATCH11Q8N954 259 aa8.9□□□□□ -0.98
SDC2-208ENST00000523877 RGS22Q8NE09 1264 aa8.9□□□□□ -0.98
SDC2-208ENST00000523877 TSHZ2Q9NRE2 1034 aa8.9□□□□□ -0.98
SDC2-208ENST00000523877 CCDC61Q9Y6R9 512 aa8.9□□□□□ -0.98
SDC2-208ENST00000523877 CCDC27Q2M243 656 aa8.89□□□□□ -0.99
SDC2-208ENST00000523877 PPARGC1BQ86YN6 1023 aaKnown RBP8.89□□□□□ -0.99
SDC2-208ENST00000523877 CANXP27824 592 aaKnown RBP8.88□□□□□ -0.99
SDC2-208ENST00000523877 CCDC180Q9P1Z9 1646 aa8.87□□□□□ -0.99
SDC2-208ENST00000523877 POTEMA6NI47 508 aa8.86□□□□□ -0.99
SDC2-208ENST00000523877 ATN1P54259 1190 aaPredicted RBP8.86□□□□□ -0.99
SDC2-208ENST00000523877 SLC39A7Q92504 469 aa8.86□□□□□ -0.99
SDC2-208ENST00000523877 CHMP4BQ9H444 224 aaKnown RBP8.86□□□□□ -0.99
SDC2-208ENST00000523877 MTMR7Q9Y216 660 aa8.86□□□□□ -0.99
SDC2-208ENST00000523877 CLGNO14967 610 aa8.85□□□□□ -0.99
SDC2-208ENST00000523877 VGFO15240 615 aaPredicted RBP8.85□□□□□ -0.99
SDC2-208ENST00000523877 C7P10643 843 aa8.85□□□□□ -0.99
SDC2-208ENST00000523877 KIF12Q96FN5 646 aa8.85□□□□□ -0.99
SDC2-208ENST00000523877 TRPC6Q9Y210 931 aa8.85□□□□□ -0.99
SDC2-208ENST00000523877 PHF14O94880 888 aa8.84□□□□□ -0.99
SDC2-208ENST00000523877 FAM193AP78312 1265 aa8.84□□□□□ -0.99
SDC2-208ENST00000523877 MIER1Q8N108 512 aa8.84□□□□□ -0.99
SDC2-208ENST00000523877 E9PSI1 815 aa8.83□□□□□ -1
SDC2-208ENST00000523877 HSP90AB4PQ58FF6 505 aa8.83□□□□□ -1
SDC2-208ENST00000523877 POTEGQ6S5H5 508 aa8.83□□□□□ -1
SDC2-208ENST00000523877 POTEFA5A3E0 1075 aa8.82□□□□□ -1
SDC2-208ENST00000523877 BMP2KQ9NSY1 1161 aaPredicted RBP8.82□□□□□ -1
SDC2-208ENST00000523877 RASEFQ8IZ41 740 aa8.81□□□□□ -1
SDC2-208ENST00000523877 ANP32BQ92688 251 aaKnown RBP8.81□□□□□ -1
SDC2-208ENST00000523877 ZNF622Q969S3 477 aaKnown RBP eCLIP8.81□□□□□ -1
SDC2-208ENST00000523877 BRPF1P55201 1214 aaPredicted RBP8.8□□□□□ -1
SDC2-208ENST00000523877 ZNF428Q96B54 188 aa8.8□□□□□ -1
SDC2-208ENST00000523877 MAP3K13O43283 966 aa8.79□□□□□ -1
SDC2-208ENST00000523877 OS9Q13438 667 aaPredicted RBP8.79□□□□□ -1
SDC2-208ENST00000523877 AXDND1Q5T1B0 1012 aaPredicted RBP8.79□□□□□ -1
SDC2-208ENST00000523877 LCE2DQ5TA82 110 aaPredicted RBP8.79□□□□□ -1
SDC2-208ENST00000523877 PLCD3Q8N3E9 789 aa8.79□□□□□ -1
SDC2-208ENST00000523877 GTF2E1P29083 439 aaPredicted RBP8.78□□□□□ -1
SDC2-208ENST00000523877 FOXD4L5Q5VV16 416 aaPredicted RBP8.78□□□□□ -1
SDC2-208ENST00000523877 EXOC8Q8IYI6 725 aa8.78□□□□□ -1
SDC2-208ENST00000523877 FOXD4L4Q8WXT5 416 aaPredicted RBP8.78□□□□□ -1
SDC2-208ENST00000523877 FAM43BQ6ZT52 329 aaPredicted RBP8.77□□□□□ -1.01
SDC2-208ENST00000523877 C1orf115Q9H7X2 142 aa8.77□□□□□ -1.01
SDC2-208ENST00000523877 KCNG1Q9UIX4 513 aa8.76□□□□□ -1.01
SDC2-208ENST00000523877 PATL2C9JE40 543 aaKnown RBP8.75□□□□□ -1.01
SDC2-208ENST00000523877 KDM4AO75164 1064 aa8.75□□□□□ -1.01
SDC2-208ENST00000523877 TMCO4Q5TGY1 634 aa8.75□□□□□ -1.01
SDC2-208ENST00000523877 SPRYD3Q8NCJ5 442 aa8.75□□□□□ -1.01
SDC2-208ENST00000523877 PLEKHD1A6NEE1 506 aa8.74□□□□□ -1.01
SDC2-208ENST00000523877 RRP9O43818 475 aaKnown RBP8.74□□□□□ -1.01
SDC2-208ENST00000523877 MAMSTRQ6ZN01 415 aa8.74□□□□□ -1.01
SDC2-208ENST00000523877 TIE1P35590 1138 aa8.73□□□□□ -1.01
SDC2-208ENST00000523877 TTLL13PA6NNM8 815 aa8.72□□□□□ -1.01
SDC2-208ENST00000523877 STAC3Q96MF2 364 aa8.72□□□□□ -1.01
SDC2-208ENST00000523877 MFAP1P55081 439 aaKnown RBP8.71□□□□□ -1.02
SDC2-208ENST00000523877 CCDC125Q86Z20 511 aa8.71□□□□□ -1.02
SDC2-208ENST00000523877 COLQQ9Y215 455 aaPredicted RBP8.71□□□□□ -1.02
SDC2-208ENST00000523877 RB1CC1Q8TDY2 1594 aa8.7□□□□□ -1.02
SDC2-208ENST00000523877 TRIM44Q96DX7 344 aaPredicted RBP8.7□□□□□ -1.02
SDC2-208ENST00000523877 FAM163AQ96GL9 167 aaPredicted RBP8.7□□□□□ -1.02
SDC2-208ENST00000523877 SCUBE2Q9NQ36 999 aa8.7□□□□□ -1.02
SDC2-208ENST00000523877 DCAF1Q9Y4B6 1507 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms