RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 C19orf67A6NJJ6 358 aa10□□□□□ -0.81
CTNNA1-233ENST00000522052 TTLL13PA6NNM8 815 aa10□□□□□ -0.81
CTNNA1-233ENST00000522052 MLLT3P42568 568 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-233ENST00000522052 RBM26Q5T8P6 1007 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-233ENST00000522052 GPIHBP1Q8IV16 184 aa9.98□□□□□ -0.81
CTNNA1-233ENST00000522052 AK7Q96M32 723 aa9.96□□□□□ -0.82
CTNNA1-233ENST00000522052 BMP2KQ9NSY1 1161 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-233ENST00000522052 SPDYE16A6NNV3 312 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-233ENST00000522052 DPYSL4O14531 572 aa9.94□□□□□ -0.82
CTNNA1-233ENST00000522052 DSG2Q14126 1118 aa9.93□□□□□ -0.82
CTNNA1-233ENST00000522052 PDIA6Q15084 440 aa9.93□□□□□ -0.82
CTNNA1-233ENST00000522052 ARXQ96QS3 562 aa9.93□□□□□ -0.82
CTNNA1-233ENST00000522052 EMILIN3Q9NT22 766 aa9.93□□□□□ -0.82
CTNNA1-233ENST00000522052 TRIM35Q9UPQ4 493 aa9.93□□□□□ -0.82
CTNNA1-233ENST00000522052 KRI1Q8N9T8 703 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-233ENST00000522052 FOXK1P85037 733 aa9.91□□□□□ -0.82
CTNNA1-233ENST00000522052 DPY19L2Q6NUT2 758 aa9.91□□□□□ -0.82
CTNNA1-233ENST00000522052 MICALL2Q8IY33 904 aa9.91□□□□□ -0.82
CTNNA1-233ENST00000522052 TMC2Q8TDI7 906 aa9.9□□□□□ -0.82
CTNNA1-233ENST00000522052 DAXXQ9UER7 740 aaPredicted RBP9.9□□□□□ -0.82
CTNNA1-233ENST00000522052 GALR2O43603 387 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-233ENST00000522052 PDCD7Q8N8D1 485 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-233ENST00000522052 GPBP1L1Q9HC44 474 aaPredicted RBP9.86□□□□□ -0.83
CTNNA1-233ENST00000522052 TRIM66O15016 1216 aa9.85□□□□□ -0.83
CTNNA1-233ENST00000522052 TMEM121BQ9BXQ6 578 aaPredicted RBP9.85□□□□□ -0.83
CTNNA1-233ENST00000522052 CLCN6P51797 869 aa9.84□□□□□ -0.83
CTNNA1-233ENST00000522052 PLPP6Q8IY26 295 aa9.84□□□□□ -0.83
CTNNA1-233ENST00000522052 KDM4CQ9H3R0 1056 aa9.84□□□□□ -0.83
CTNNA1-233ENST00000522052 GPR37O15354 613 aa9.83□□□□□ -0.84
CTNNA1-233ENST00000522052 HAX1O00165 279 aa9.82□□□□□ -0.84
CTNNA1-233ENST00000522052 KIF3CO14782 793 aa9.82□□□□□ -0.84
CTNNA1-233ENST00000522052 IRX5P78411 483 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-233ENST00000522052 PDE4DQ08499 809 aa9.82□□□□□ -0.84
CTNNA1-233ENST00000522052 BOLA1Q9Y3E2 137 aa9.82□□□□□ -0.84
CTNNA1-233ENST00000522052 C2orf72A6NCS6 295 aa9.81□□□□□ -0.84
CTNNA1-233ENST00000522052 OCEL1Q9H607 264 aa9.81□□□□□ -0.84
CTNNA1-233ENST00000522052 ATN1P54259 1190 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-233ENST00000522052 IER5LQ5T953 404 aa9.8□□□□□ -0.84
CTNNA1-233ENST00000522052 IL27Q8NEV9 243 aa9.8□□□□□ -0.84
CTNNA1-233ENST00000522052 G3V3G9 751 aa9.79□□□□□ -0.84
CTNNA1-233ENST00000522052 MAP3K9P80192 1104 aa9.79□□□□□ -0.84
CTNNA1-233ENST00000522052 GRXCR2A6NFK2 248 aa9.77□□□□□ -0.85
CTNNA1-233ENST00000522052 ATMINO43313 823 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-233ENST00000522052 MINK1Q8N4C8 1332 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-233ENST00000522052 ASTLQ6HA08 431 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-233ENST00000522052 HOMEZQ8IX15 550 aa9.76□□□□□ -0.85
CTNNA1-233ENST00000522052 NUTM2FA1L443 756 aa9.75□□□□□ -0.85
CTNNA1-233ENST00000522052 MAP2K5Q13163 448 aa9.75□□□□□ -0.85
CTNNA1-233ENST00000522052 OSBPP22059 807 aa9.74□□□□□ -0.85
CTNNA1-233ENST00000522052 SUPT5HO00267 1087 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-233ENST00000522052 PLCG2P16885 1265 aa9.73□□□□□ -0.85
CTNNA1-233ENST00000522052 PTGER2P43116 358 aa9.73□□□□□ -0.85
CTNNA1-233ENST00000522052 L3MBTL3Q96JM7 780 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-233ENST00000522052 IRF6O14896 467 aa9.72□□□□□ -0.85
CTNNA1-233ENST00000522052 OXER1Q8TDS5 423 aa9.72□□□□□ -0.85
CTNNA1-233ENST00000522052 CCDC102AQ96A19 550 aa9.72□□□□□ -0.85
CTNNA1-233ENST00000522052 GNPATO15228 680 aa9.71□□□□□ -0.86
CTNNA1-233ENST00000522052 UPF1Q92900 1129 aaKnown RBP eCLIP9.71□□□□□ -0.86
CTNNA1-233ENST00000522052 EVX2Q03828 476 aa9.7□□□□□ -0.86
CTNNA1-233ENST00000522052 AMHR2Q16671 573 aa9.7□□□□□ -0.86
CTNNA1-233ENST00000522052 FAM117AQ9C073 453 aa9.7□□□□□ -0.86
CTNNA1-233ENST00000522052 FCHSD2O94868 740 aa9.69□□□□□ -0.86
CTNNA1-233ENST00000522052 HIC1Q14526 733 aa9.69□□□□□ -0.86
CTNNA1-233ENST00000522052 TMEM92Q6UXU6 159 aa9.69□□□□□ -0.86
CTNNA1-233ENST00000522052 TBC1D12O60347 775 aa9.68□□□□□ -0.86
CTNNA1-233ENST00000522052 DDX12PQ92771 950 aa9.68□□□□□ -0.86
CTNNA1-233ENST00000522052 DDRGK1Q96HY6 314 aa9.68□□□□□ -0.86
CTNNA1-233ENST00000522052 ZNF316A6NFI3 1004 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-233ENST00000522052 PLEKHG3A1L390 1219 aa9.65□□□□□ -0.86
CTNNA1-233ENST00000522052 EVI5O60447 810 aa9.65□□□□□ -0.86
CTNNA1-233ENST00000522052 PARP9Q8IXQ6 854 aa9.65□□□□□ -0.86
CTNNA1-233ENST00000522052 ZMYND15Q9H091 742 aa9.65□□□□□ -0.86
CTNNA1-233ENST00000522052 FECHP22830 423 aa9.64□□□□□ -0.87
CTNNA1-233ENST00000522052 PRIM1P49642 420 aaKnown RBP9.63□□□□□ -0.87
CTNNA1-233ENST00000522052 PTGDRQ13258 359 aa9.63□□□□□ -0.87
CTNNA1-233ENST00000522052 SEC24BO95487 1268 aa9.62□□□□□ -0.87
CTNNA1-233ENST00000522052 PTCD2Q8WV60 388 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-233ENST00000522052 RSPH6AQ9H0K4 717 aa9.6□□□□□ -0.87
CTNNA1-233ENST00000522052 COLQQ9Y215 455 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-233ENST00000522052 TTLL12Q14166 644 aaPredicted RBP9.59□□□□□ -0.87
CTNNA1-233ENST00000522052 ANO8Q9HCE9 1232 aaPredicted RBP9.58□□□□□ -0.88
CTNNA1-233ENST00000522052 GOPCQ9HD26 462 aa9.58□□□□□ -0.88
CTNNA1-233ENST00000522052 PELP1Q8IZL8 1130 aaKnown RBP9.57□□□□□ -0.88
CTNNA1-233ENST00000522052 SLC34A2O95436 690 aa9.56□□□□□ -0.88
CTNNA1-233ENST00000522052 GIGYF2Q6Y7W6 1299 aaKnown RBP9.55□□□□□ -0.88
CTNNA1-233ENST00000522052 SLC39A7Q92504 469 aa9.55□□□□□ -0.88
CTNNA1-233ENST00000522052 GABBR2O75899 941 aa9.54□□□□□ -0.88
CTNNA1-233ENST00000522052 PHF14O94880 888 aa9.54□□□□□ -0.88
CTNNA1-233ENST00000522052 EN1Q05925 392 aaPredicted RBP9.54□□□□□ -0.88
CTNNA1-233ENST00000522052 EPAS1Q99814 870 aa9.54□□□□□ -0.88
CTNNA1-233ENST00000522052 FLIIQ13045 1269 aa9.53□□□□□ -0.88
CTNNA1-233ENST00000522052 C3orf67Q6ZVT6 689 aa9.53□□□□□ -0.88
CTNNA1-233ENST00000522052 DCBLD2Q96PD2 775 aa9.53□□□□□ -0.88
CTNNA1-233ENST00000522052 POTEFA5A3E0 1075 aa9.52□□□□□ -0.89
CTNNA1-233ENST00000522052 C7P10643 843 aa9.52□□□□□ -0.89
CTNNA1-233ENST00000522052 MS4A1P11836 297 aa9.52□□□□□ -0.89
CTNNA1-233ENST00000522052 CDHR5Q9HBB8 845 aa9.52□□□□□ -0.89
CTNNA1-233ENST00000522052 NPDC1Q9NQX5 325 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-233ENST00000522052 MAP3K7O43318 606 aa9.5□□□□□ -0.89
CTNNA1-233ENST00000522052 TMUB1Q9BVT8 246 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms