RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 TTC37Q6PGP7 1564 aa15.15■□□□□ 0.02
MRPS28-207ENST00000521434 MAGI2Q86UL8 1455 aa15.14■□□□□ 0.01
MRPS28-207ENST00000521434 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.14■□□□□ 0.01
MRPS28-207ENST00000521434 YEATS2Q9ULM3 1422 aa15.14■□□□□ 0.01
MRPS28-207ENST00000521434 PREX1Q8TCU6 1659 aa15.12■□□□□ 0.01
MRPS28-207ENST00000521434 HECW1Q76N89 1606 aa15.11■□□□□ 0.01
MRPS28-207ENST00000521434 MLECQ14165 292 aa15.11■□□□□ 0.01
MRPS28-207ENST00000521434 CSRNP3Q8WYN3 585 aa15.09■□□□□ 0.01
MRPS28-207ENST00000521434 SETD1BQ9UPS6 1966 aaKnown RBP15.09■□□□□ 0.01
MRPS28-207ENST00000521434 DISP3Q9P2K9 1392 aa15.09■□□□□ 0.01
MRPS28-207ENST00000521434 PPP4R3CPQ6ZMV5 832 aa15.08■□□□□ 0
MRPS28-207ENST00000521434 ARHGEF12Q9NZN5 1544 aa15.07■□□□□ 0
MRPS28-207ENST00000521434 STRCQ7RTU9 1775 aa15.07■□□□□ 0
MRPS28-207ENST00000521434 SOCS7O14512 581 aa15.07■□□□□ 0
MRPS28-207ENST00000521434 ILDR2Q71H61 639 aa15.07■□□□□ 0
MRPS28-207ENST00000521434 RANGAP1P46060 587 aaPredicted RBP15.06■□□□□ 0
MRPS28-207ENST00000521434 DMRT2Q9Y5R5 561 aa15.05■□□□□ -0
MRPS28-207ENST00000521434 SCAPERQ9BY12 1400 aa15.05■□□□□ -0
MRPS28-207ENST00000521434 ATP10AO60312 1499 aa15.05■□□□□ -0
MRPS28-207ENST00000521434 C9orf84Q5VXU9 1444 aa15.04■□□□□ -0
MRPS28-207ENST00000521434 PLCH2O75038 1416 aa15.03■□□□□ -0
MRPS28-207ENST00000521434 MYO5CQ9NQX4 1742 aa15.02□□□□□ -0.01
MRPS28-207ENST00000521434 CEBPAP49715 358 aaPredicted RBP15.01□□□□□ -0.01
MRPS28-207ENST00000521434 CDK13Q14004 1512 aaKnown RBP15.01□□□□□ -0.01
MRPS28-207ENST00000521434 UHRF1BP1Q6BDS2 1440 aa15□□□□□ -0.01
MRPS28-207ENST00000521434 SPATA31D1Q6ZQQ2 1576 aa14.99□□□□□ -0.01
MRPS28-207ENST00000521434 EFCAB2Q5VUJ9 269 aa14.97□□□□□ -0.01
MRPS28-207ENST00000521434 EEA1Q15075 1411 aa14.97□□□□□ -0.01
MRPS28-207ENST00000521434 ZNF518AQ6AHZ1 1483 aa14.96□□□□□ -0.01
MRPS28-207ENST00000521434 PTPRTO14522 1441 aa14.96□□□□□ -0.01
MRPS28-207ENST00000521434 C3P01024 1663 aa14.95□□□□□ -0.02
MRPS28-207ENST00000521434 SCAF1Q9H7N4 1312 aaKnown RBP14.94□□□□□ -0.02
MRPS28-207ENST00000521434 KDM5CP41229 1560 aa14.94□□□□□ -0.02
MRPS28-207ENST00000521434 REREQ9P2R6 1566 aa14.93□□□□□ -0.02
MRPS28-207ENST00000521434 DIP2CQ9Y2E4 1556 aa14.92□□□□□ -0.02
MRPS28-207ENST00000521434 KIF14Q15058 1648 aa14.92□□□□□ -0.02
MRPS28-207ENST00000521434 IQSEC2Q5JU85 1478 aa14.91□□□□□ -0.02
MRPS28-207ENST00000521434 AFAP1Q8N556 730 aa14.91□□□□□ -0.02
MRPS28-207ENST00000521434 LTBP4Q8N2S1 1624 aa14.91□□□□□ -0.02
MRPS28-207ENST00000521434 ARHGAP5Q13017 1502 aa14.91□□□□□ -0.02
MRPS28-207ENST00000521434 MYT1LQ9UL68 1186 aa14.9□□□□□ -0.02
MRPS28-207ENST00000521434 CDK11AQ9UQ88 783 aaPredicted RBP14.9□□□□□ -0.02
MRPS28-207ENST00000521434 ABCA6Q8N139 1617 aa14.89□□□□□ -0.03
MRPS28-207ENST00000521434 ATP1B4Q9UN42 357 aaPredicted RBP14.88□□□□□ -0.03
MRPS28-207ENST00000521434 FMN1Q68DA7 1419 aa14.88□□□□□ -0.03
MRPS28-207ENST00000521434 TRAPPC8Q9Y2L5 1435 aa14.88□□□□□ -0.03
MRPS28-207ENST00000521434 AGLP35573 1532 aa14.87□□□□□ -0.03
MRPS28-207ENST00000521434 CDC42BPBQ9Y5S2 1711 aa14.87□□□□□ -0.03
MRPS28-207ENST00000521434 ESF1Q9H501 851 aaKnown RBP14.87□□□□□ -0.03
MRPS28-207ENST00000521434 MLH3Q9UHC1 1453 aa14.87□□□□□ -0.03
MRPS28-207ENST00000521434 TROQ12816 1431 aaPredicted RBP14.86□□□□□ -0.03
MRPS28-207ENST00000521434 NCOA1Q15788 1441 aa14.86□□□□□ -0.03
MRPS28-207ENST00000521434 CLIP1P30622 1438 aa14.84□□□□□ -0.03
MRPS28-207ENST00000521434 MAPK8IP2Q13387 824 aaPredicted RBP14.84□□□□□ -0.03
MRPS28-207ENST00000521434 CNTLNQ9NXG0 1405 aa14.83□□□□□ -0.03
MRPS28-207ENST00000521434 LRRIQ1Q96JM4 1722 aa14.83□□□□□ -0.04
MRPS28-207ENST00000521434 ITSN2Q9NZM3 1697 aa14.82□□□□□ -0.04
MRPS28-207ENST00000521434 KIDINS220Q9ULH0 1771 aa14.82□□□□□ -0.04
MRPS28-207ENST00000521434 ABCC1P33527 1531 aa14.82□□□□□ -0.04
MRPS28-207ENST00000521434 CAMSAP1Q5T5Y3 1602 aa14.81□□□□□ -0.04
MRPS28-207ENST00000521434 PREX2Q70Z35 1606 aa14.81□□□□□ -0.04
MRPS28-207ENST00000521434 MROH2AA6NES4 1674 aa14.81□□□□□ -0.04
MRPS28-207ENST00000521434 ARHGAP35Q9NRY4 1499 aa14.8□□□□□ -0.04
MRPS28-207ENST00000521434 NPATQ14207 1427 aa14.79□□□□□ -0.04
MRPS28-207ENST00000521434 SUPT6HQ7KZ85 1726 aaKnown RBP14.78□□□□□ -0.04
MRPS28-207ENST00000521434 UBTFP17480 764 aaKnown RBP14.77□□□□□ -0.05
MRPS28-207ENST00000521434 CDC42BPAQ5VT25 1732 aa14.76□□□□□ -0.05
MRPS28-207ENST00000521434 UBAP1LF5GYI3 381 aa14.76□□□□□ -0.05
MRPS28-207ENST00000521434 ZNF142P52746 1687 aaPredicted RBP14.75□□□□□ -0.05
MRPS28-207ENST00000521434 ZNF335Q9H4Z2 1342 aaPredicted RBP14.75□□□□□ -0.05
MRPS28-207ENST00000521434 ZMYM3Q14202 1370 aa14.74□□□□□ -0.05
MRPS28-207ENST00000521434 NCKAP5LQ9HCH0 1330 aa14.74□□□□□ -0.05
MRPS28-207ENST00000521434 MYO3AQ8NEV4 1616 aa14.74□□□□□ -0.05
MRPS28-207ENST00000521434 KCNA4P22459 653 aa14.73□□□□□ -0.05
MRPS28-207ENST00000521434 PLA2R1Q13018 1463 aa14.73□□□□□ -0.05
MRPS28-207ENST00000521434 SAMD9LQ8IVG5 1584 aa14.73□□□□□ -0.05
MRPS28-207ENST00000521434 CLTCQ00610 1675 aaKnown RBP14.72□□□□□ -0.05
MRPS28-207ENST00000521434 PKD2Q13563 968 aa14.72□□□□□ -0.05
MRPS28-207ENST00000521434 EHMT2Q96KQ7 1210 aa14.72□□□□□ -0.05
MRPS28-207ENST00000521434 TCOF1Q13428 1488 aaKnown RBP14.7□□□□□ -0.06
MRPS28-207ENST00000521434 CCDC18Q5T9S5 1454 aa14.7□□□□□ -0.06
MRPS28-207ENST00000521434 CEP170BQ9Y4F5 1589 aaPredicted RBP14.7□□□□□ -0.06
MRPS28-207ENST00000521434 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
MRPS28-207ENST00000521434 SPAG9O60271 1321 aaKnown RBP14.67□□□□□ -0.06
MRPS28-207ENST00000521434 PTPRKQ15262 1439 aa14.67□□□□□ -0.06
MRPS28-207ENST00000521434 CASKIN1Q8WXD9 1431 aa14.67□□□□□ -0.06
MRPS28-207ENST00000521434 SYCP2Q9BX26 1530 aa14.67□□□□□ -0.06
MRPS28-207ENST00000521434 PLXNC1O60486 1568 aa14.67□□□□□ -0.06
MRPS28-207ENST00000521434 ATP7AQ04656 1500 aa14.66□□□□□ -0.06
MRPS28-207ENST00000521434 MED1Q15648 1581 aaPredicted RBP14.66□□□□□ -0.06
MRPS28-207ENST00000521434 CNKSR2Q8WXI2 1034 aa14.66□□□□□ -0.06
MRPS28-207ENST00000521434 ZNF777Q9ULD5 760 aaPredicted RBP14.66□□□□□ -0.06
MRPS28-207ENST00000521434 INO80Q9ULG1 1556 aaPredicted RBP14.64□□□□□ -0.07
MRPS28-207ENST00000521434 A2MP01023 1474 aa14.64□□□□□ -0.07
MRPS28-207ENST00000521434 HNRNPMP52272 730 aaKnown RBP eCLIP14.63□□□□□ -0.07
MRPS28-207ENST00000521434 POLR1AO95602 1720 aaPredicted RBP14.63□□□□□ -0.07
MRPS28-207ENST00000521434 GPATCH8Q9UKJ3 1502 aaKnown RBP14.62□□□□□ -0.07
MRPS28-207ENST00000521434 HSPA1LP34931 641 aa14.62□□□□□ -0.07
MRPS28-207ENST00000521434 GGT6Q6P531 493 aa14.62□□□□□ -0.07
MRPS28-207ENST00000521434 KIAA1107Q9UPP5 1409 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms