RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 RBM42Q9BTD8 480 aaKnown RBP6.45□□□□□ -1.38
SREK1-208ENST00000520580 ZNF316A6NFI3 1004 aaPredicted RBP6.45□□□□□ -1.38
SREK1-208ENST00000520580 SOX12O15370 315 aa6.44□□□□□ -1.38
SREK1-208ENST00000520580 CRISPLD2Q9H0B8 497 aa6.44□□□□□ -1.38
SREK1-208ENST00000520580 MFSD10Q14728 455 aa6.44□□□□□ -1.38
SREK1-208ENST00000520580 MS4A4AQ96JQ5 239 aa6.43□□□□□ -1.38
SREK1-208ENST00000520580 FARP1Q9Y4F1 1045 aaPredicted RBP6.42□□□□□ -1.38
SREK1-208ENST00000520580 MAP3K13O43283 966 aa6.41□□□□□ -1.38
SREK1-208ENST00000520580 CAMK2BQ13554 666 aa6.41□□□□□ -1.38
SREK1-208ENST00000520580 ARIH1Q9Y4X5 557 aaPredicted RBP6.41□□□□□ -1.38
SREK1-208ENST00000520580 DPYSL4O14531 572 aa6.4□□□□□ -1.39
SREK1-208ENST00000520580 PLEKHG3A1L390 1219 aa6.39□□□□□ -1.39
SREK1-208ENST00000520580 PDIA4P13667 645 aaKnown RBP6.38□□□□□ -1.39
SREK1-208ENST00000520580 CLUAP1Q96AJ1 413 aa6.38□□□□□ -1.39
SREK1-208ENST00000520580 CCDC82Q8N4S0 544 aa6.37□□□□□ -1.39
SREK1-208ENST00000520580 PPP1R15BQ5SWA1 713 aa6.36□□□□□ -1.39
SREK1-208ENST00000520580 EMILIN3Q9NT22 766 aa6.36□□□□□ -1.39
SREK1-208ENST00000520580 ZBTB7CA1YPR0 619 aa6.35□□□□□ -1.39
SREK1-208ENST00000520580 GPR37O15354 613 aa6.35□□□□□ -1.39
SREK1-208ENST00000520580 NECTIN2Q92692 538 aa6.35□□□□□ -1.39
SREK1-208ENST00000520580 CCDC102AQ96A19 550 aa6.35□□□□□ -1.39
SREK1-208ENST00000520580 PARP9Q8IXQ6 854 aa6.35□□□□□ -1.39
SREK1-208ENST00000520580 DDRGK1Q96HY6 314 aa6.35□□□□□ -1.39
SREK1-208ENST00000520580 GOLGA2Q08379 1002 aa6.34□□□□□ -1.39
SREK1-208ENST00000520580 KIF12Q96FN5 646 aa6.34□□□□□ -1.39
SREK1-208ENST00000520580 NUTM2FA1L443 756 aa6.33□□□□□ -1.4
SREK1-208ENST00000520580 FLIIQ13045 1269 aa6.33□□□□□ -1.4
SREK1-208ENST00000520580 GRXCR2A6NFK2 248 aa6.33□□□□□ -1.4
SREK1-208ENST00000520580 PAK3O75914 559 aaPredicted RBP6.32□□□□□ -1.4
SREK1-208ENST00000520580 TTLL12Q14166 644 aaPredicted RBP6.32□□□□□ -1.4
SREK1-208ENST00000520580 PDIA6Q15084 440 aa6.32□□□□□ -1.4
SREK1-208ENST00000520580 CCDC9Q9Y3X0 531 aaKnown RBP6.32□□□□□ -1.4
SREK1-208ENST00000520580 PRKAR2AP13861 404 aaKnown RBP6.31□□□□□ -1.4
SREK1-208ENST00000520580 SP7Q8TDD2 431 aaPredicted RBP6.31□□□□□ -1.4
SREK1-208ENST00000520580 ONECUT3O60422 494 aaPredicted RBP6.31□□□□□ -1.4
SREK1-208ENST00000520580 FECHP22830 423 aa6.31□□□□□ -1.4
SREK1-208ENST00000520580 GPHNQ9NQX3 736 aaPredicted RBP6.31□□□□□ -1.4
SREK1-208ENST00000520580 MINK1Q8N4C8 1332 aaPredicted RBP6.31□□□□□ -1.4
SREK1-208ENST00000520580 IRF6O14896 467 aa6.3□□□□□ -1.4
SREK1-208ENST00000520580 MAP2K5Q13163 448 aa6.3□□□□□ -1.4
SREK1-208ENST00000520580 DSG2Q14126 1118 aa6.3□□□□□ -1.4
SREK1-208ENST00000520580 TRAK2O60296 914 aa6.29□□□□□ -1.4
SREK1-208ENST00000520580 AMHR2Q16671 573 aa6.29□□□□□ -1.4
SREK1-208ENST00000520580 ZNF777Q9ULD5 760 aaPredicted RBP6.29□□□□□ -1.4
SREK1-208ENST00000520580 TMEM106CQ9BVX2 250 aa6.28□□□□□ -1.4
SREK1-208ENST00000520580 SPDYE16A6NNV3 312 aaPredicted RBP6.27□□□□□ -1.41
SREK1-208ENST00000520580 GNPATO15228 680 aa6.26□□□□□ -1.41
SREK1-208ENST00000520580 MS4A1P11836 297 aa6.26□□□□□ -1.41
SREK1-208ENST00000520580 TRPC6Q9Y210 931 aa6.26□□□□□ -1.41
SREK1-208ENST00000520580 GIGYF2Q6Y7W6 1299 aaKnown RBP6.25□□□□□ -1.41
SREK1-208ENST00000520580 A6NJR5 290 aa6.25□□□□□ -1.41
SREK1-208ENST00000520580 MCM6Q14566 821 aa6.25□□□□□ -1.41
SREK1-208ENST00000520580 AEBP1Q8IUX7 1158 aa6.25□□□□□ -1.41
SREK1-208ENST00000520580 PHF12Q96QT6 1004 aa6.25□□□□□ -1.41
SREK1-208ENST00000520580 ATP1B4Q9UN42 357 aaPredicted RBP6.25□□□□□ -1.41
SREK1-208ENST00000520580 KCTD17Q8N5Z5 321 aa6.24□□□□□ -1.41
SREK1-208ENST00000520580 POM121Q96HA1 1249 aa6.24□□□□□ -1.41
SREK1-208ENST00000520580 PCMTD1Q96MG8 357 aaPredicted RBP6.24□□□□□ -1.41
SREK1-208ENST00000520580 REPIN1Q9BWE0 567 aaKnown RBP6.24□□□□□ -1.41
SREK1-208ENST00000520580 DDX12PQ92771 950 aa6.23□□□□□ -1.41
SREK1-208ENST00000520580 GOPCQ9HD26 462 aa6.23□□□□□ -1.41
SREK1-208ENST00000520580 OSBPP22059 807 aa6.23□□□□□ -1.41
SREK1-208ENST00000520580 ZRANB1Q9UGI0 708 aa6.23□□□□□ -1.41
SREK1-208ENST00000520580 HIC1Q14526 733 aa6.22□□□□□ -1.41
SREK1-208ENST00000520580 DPY19L2Q6NUT2 758 aa6.22□□□□□ -1.41
SREK1-208ENST00000520580 UPF1Q92900 1129 aaKnown RBP eCLIP6.22□□□□□ -1.41
SREK1-208ENST00000520580 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.22□□□□□ -1.412e-7■■■□□ 14.8
SREK1-208ENST00000520580 MAP3K9P80192 1104 aa6.22□□□□□ -1.41
SREK1-208ENST00000520580 PROSER2Q86WR7 435 aaPredicted RBP6.22□□□□□ -1.41
SREK1-208ENST00000520580 TMC2Q8TDI7 906 aa6.22□□□□□ -1.41
SREK1-208ENST00000520580 FOXK1P85037 733 aa6.21□□□□□ -1.42
SREK1-208ENST00000520580 PLPP6Q8IY26 295 aa6.21□□□□□ -1.42
SREK1-208ENST00000520580 FCHSD2O94868 740 aa6.2□□□□□ -1.42
SREK1-208ENST00000520580 CCDC97Q96F63 343 aaPredicted RBP6.2□□□□□ -1.42
SREK1-208ENST00000520580 RAD21O60216 631 aa6.19□□□□□ -1.42
SREK1-208ENST00000520580 PRIM1P49642 420 aaKnown RBP6.18□□□□□ -1.42
SREK1-208ENST00000520580 MICALL2Q8IY33 904 aa6.18□□□□□ -1.42
SREK1-208ENST00000520580 POLR3EQ9NVU0 708 aa6.18□□□□□ -1.42
SREK1-208ENST00000520580 PROCA1Q8NCQ7 364 aaPredicted RBP6.17□□□□□ -1.42
SREK1-208ENST00000520580 C2orf72A6NCS6 295 aa6.17□□□□□ -1.42
SREK1-208ENST00000520580 PTGDRQ13258 359 aa6.17□□□□□ -1.42
SREK1-208ENST00000520580 FNBP4Q8N3X1 1017 aaPredicted RBP6.17□□□□□ -1.42
SREK1-208ENST00000520580 MS4A3Q96HJ5 214 aa6.17□□□□□ -1.42
SREK1-208ENST00000520580 CD44P16070 742 aaKnown RBP6.16□□□□□ -1.42
SREK1-208ENST00000520580 MDM2Q00987 491 aaPredicted RBP6.16□□□□□ -1.42
SREK1-208ENST00000520580 SH3D19Q5HYK7 790 aa6.16□□□□□ -1.42
SREK1-208ENST00000520580 RETREG2Q8NC44 543 aa6.16□□□□□ -1.42
SREK1-208ENST00000520580 FXR2P51116 673 aaKnown RBP eCLIP6.16□□□□□ -1.42
SREK1-208ENST00000520580 SERPINA10Q9UK55 444 aa6.16□□□□□ -1.42
SREK1-208ENST00000520580 OXER1Q8TDS5 423 aa6.15□□□□□ -1.42
SREK1-208ENST00000520580 PHOX2BQ99453 314 aa6.15□□□□□ -1.42
SREK1-208ENST00000520580 TRAIPQ9BWF2 469 aa6.15□□□□□ -1.42
SREK1-208ENST00000520580 NLRP7Q8WX94 980 aa6.15□□□□□ -1.43
SREK1-208ENST00000520580 TTLL13PA6NNM8 815 aa6.14□□□□□ -1.43
SREK1-208ENST00000520580 ILDR1Q86SU0 546 aaPredicted RBP6.14□□□□□ -1.43
SREK1-208ENST00000520580 BEGAINQ9BUH8 593 aa6.14□□□□□ -1.43
SREK1-208ENST00000520580 MTMR7Q9Y216 660 aa6.14□□□□□ -1.43
SREK1-208ENST00000520580 SSTR3P32745 418 aaPredicted RBP6.13□□□□□ -1.43
SREK1-208ENST00000520580 ZNF428Q96B54 188 aa6.13□□□□□ -1.43
SREK1-208ENST00000520580 CDHR5Q9HBB8 845 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms