RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 CDC42BPAQ5VT25 1732 aa27.02■■□□□ 1.92
FAM49B-214ENST00000519540 ROCK1Q13464 1354 aa27■■□□□ 1.91
FAM49B-214ENST00000519540 ZNF316A6NFI3 1004 aaPredicted RBP26.99■■□□□ 1.91
FAM49B-214ENST00000519540 UHRF1BP1LA0JNW5 1464 aa26.98■■□□□ 1.91
FAM49B-214ENST00000519540 ZNF777Q9ULD5 760 aaPredicted RBP26.97■■□□□ 1.91
FAM49B-214ENST00000519540 KDM6BO15054 1643 aa26.92■■□□□ 1.9
FAM49B-214ENST00000519540 SIN3AQ96ST3 1273 aa26.9■■□□□ 1.9
FAM49B-214ENST00000519540 KDM5BQ9UGL1 1544 aa26.9■■□□□ 1.9
FAM49B-214ENST00000519540 OSCARQ8IYS5 282 aa26.9■■□□□ 1.9
FAM49B-214ENST00000519540 ZCCHC11Q5TAX3 1644 aaKnown RBP26.89■■□□□ 1.9
FAM49B-214ENST00000519540 CROCC2H7BZ55 1655 aa26.88■■□□□ 1.89
FAM49B-214ENST00000519540 PREX2Q70Z35 1606 aa26.85■■□□□ 1.89
FAM49B-214ENST00000519540 NEUROD1Q13562 356 aa26.85■■□□□ 1.89
FAM49B-214ENST00000519540 CDC42BPBQ9Y5S2 1711 aa26.85■■□□□ 1.89
FAM49B-214ENST00000519540 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.85■■□□□ 1.89
FAM49B-214ENST00000519540 ADGBQ8N7X0 1667 aa26.84■■□□□ 1.89
FAM49B-214ENST00000519540 TIMELESSQ9UNS1 1208 aa26.84■■□□□ 1.89
FAM49B-214ENST00000519540 ACIN1Q9UKV3 1341 aaKnown RBP26.84■■□□□ 1.89
FAM49B-214ENST00000519540 NCOA1Q15788 1441 aa26.84■■□□□ 1.89
FAM49B-214ENST00000519540 ADGRL2O95490 1459 aa26.84■■□□□ 1.89
FAM49B-214ENST00000519540 TTC37Q6PGP7 1564 aa26.83■■□□□ 1.88
FAM49B-214ENST00000519540 DIEXFQ68CQ4 756 aaKnown RBP26.82■■□□□ 1.88
FAM49B-214ENST00000519540 TRIM52Q96A61 297 aa26.82■■□□□ 1.88
FAM49B-214ENST00000519540 SHANK2Q9UPX8 1470 aa26.78■■□□□ 1.88
FAM49B-214ENST00000519540 SAMD9LQ8IVG5 1584 aa26.78■■□□□ 1.88
FAM49B-214ENST00000519540 KCNH8Q96L42 1107 aa26.78■■□□□ 1.88
FAM49B-214ENST00000519540 ANKRD30AQ9BXX3 1397 aa26.77■■□□□ 1.88
FAM49B-214ENST00000519540 ARHGEF5Q12774 1597 aa26.77■■□□□ 1.88
FAM49B-214ENST00000519540 DENND4BO75064 1496 aaPredicted RBP26.77■■□□□ 1.88
FAM49B-214ENST00000519540 MBD5Q9P267 1494 aa26.77■■□□□ 1.88
FAM49B-214ENST00000519540 HNRNPMP52272 730 aaKnown RBP eCLIP26.75■■□□□ 1.87
FAM49B-214ENST00000519540 MPHOSPH9Q99550 1183 aa26.75■■□□□ 1.87
FAM49B-214ENST00000519540 MYO5CQ9NQX4 1742 aa26.75■■□□□ 1.87
FAM49B-214ENST00000519540 ARHGAP5Q13017 1502 aa26.73■■□□□ 1.87
FAM49B-214ENST00000519540 C9orf84Q5VXU9 1444 aa26.73■■□□□ 1.87
FAM49B-214ENST00000519540 TSPY4P0CV99 314 aa26.73■■□□□ 1.87
FAM49B-214ENST00000519540 TSPY10P0CW01 314 aa26.73■■□□□ 1.87
FAM49B-214ENST00000519540 RSPH4AQ5TD94 716 aa26.71■■□□□ 1.87
FAM49B-214ENST00000519540 CCDC141Q6ZP82 1450 aa26.68■■□□□ 1.86
FAM49B-214ENST00000519540 PLCH2O75038 1416 aa26.68■■□□□ 1.86
FAM49B-214ENST00000519540 PPP1R15AO75807 674 aaPredicted RBP26.66■■□□□ 1.86
FAM49B-214ENST00000519540 TONSLQ96HA7 1378 aa26.65■■□□□ 1.86
FAM49B-214ENST00000519540 SYCP2Q9BX26 1530 aa26.65■■□□□ 1.86
FAM49B-214ENST00000519540 ANKRD50Q9ULJ7 1429 aa26.65■■□□□ 1.86
FAM49B-214ENST00000519540 KIAA1107Q9UPP5 1409 aa26.64■■□□□ 1.86
FAM49B-214ENST00000519540 PLEKHH2Q8IVE3 1493 aa26.64■■□□□ 1.85
FAM49B-214ENST00000519540 WDR7Q9Y4E6 1490 aa26.64■■□□□ 1.85
FAM49B-214ENST00000519540 SLC4A1APQ9BWU0 796 aaKnown RBP26.6■■□□□ 1.85
FAM49B-214ENST00000519540 EFCAB2Q5VUJ9 269 aa26.6■■□□□ 1.85
FAM49B-214ENST00000519540 PZPP20742 1482 aa26.59■■□□□ 1.85
FAM49B-214ENST00000519540 KIF15Q9NS87 1388 aa26.58■■□□□ 1.85
FAM49B-214ENST00000519540 FOXD1Q16676 465 aa26.58■■□□□ 1.85
FAM49B-214ENST00000519540 MAST1Q9Y2H9 1570 aa26.58■■□□□ 1.84
FAM49B-214ENST00000519540 ANKRD30BQ9BXX2 1392 aa26.56■■□□□ 1.84
FAM49B-214ENST00000519540 ARAP3Q8WWN8 1544 aa26.56■■□□□ 1.84
FAM49B-214ENST00000519540 ARHGEF12Q9NZN5 1544 aa26.55■■□□□ 1.84
FAM49B-214ENST00000519540 ASXL2Q76L83 1435 aa26.54■■□□□ 1.84
FAM49B-214ENST00000519540 ABCA9Q8IUA7 1624 aa26.51■■□□□ 1.83
FAM49B-214ENST00000519540 ABCC1P33527 1531 aa26.51■■□□□ 1.83
FAM49B-214ENST00000519540 NPM1P06748 294 aaKnown RBP eCLIP26.5■■□□□ 1.83
FAM49B-214ENST00000519540 PLXNC1O60486 1568 aa26.47■■□□□ 1.83
FAM49B-214ENST00000519540 KDM5DQ9BY66 1539 aa26.47■■□□□ 1.83
FAM49B-214ENST00000519540 NUP155O75694 1391 aa26.47■■□□□ 1.83
FAM49B-214ENST00000519540 RPRD2Q5VT52 1461 aaKnown RBP26.46■■□□□ 1.83
FAM49B-214ENST00000519540 TRAPPC8Q9Y2L5 1435 aa26.43■■□□□ 1.82
FAM49B-214ENST00000519540 PKD2Q13563 968 aa26.43■■□□□ 1.82
FAM49B-214ENST00000519540 FANCAO15360 1455 aa26.41■■□□□ 1.82
FAM49B-214ENST00000519540 L3MBTL2Q969R5 705 aa26.39■■□□□ 1.81
FAM49B-214ENST00000519540 DUOX2Q9NRD8 1548 aa26.37■■□□□ 1.81
FAM49B-214ENST00000519540 MIER1Q8N108 512 aa26.36■■□□□ 1.81
FAM49B-214ENST00000519540 AFAP1Q8N556 730 aa26.34■■□□□ 1.81
FAM49B-214ENST00000519540 RTEL1-TNFRSF6BF6WH68 1400 aa26.34■■□□□ 1.81
FAM49B-214ENST00000519540 UNC13BO14795 1591 aa26.34■■□□□ 1.81
FAM49B-214ENST00000519540 SPAG9O60271 1321 aaKnown RBP26.33■■□□□ 1.81
FAM49B-214ENST00000519540 TEX14Q8IWB6 1497 aa26.33■■□□□ 1.81
FAM49B-214ENST00000519540 FAM135AQ9P2D6 1515 aa26.32■■□□□ 1.8
FAM49B-214ENST00000519540 ERBINQ96RT1 1412 aa26.32■■□□□ 1.8
FAM49B-214ENST00000519540 ADGRL1O94910 1474 aa26.3■■□□□ 1.8
FAM49B-214ENST00000519540 ZFYVE16Q7Z3T8 1539 aa26.28■■□□□ 1.8
FAM49B-214ENST00000519540 SCAPERQ9BY12 1400 aa26.28■■□□□ 1.8
FAM49B-214ENST00000519540 CD109Q6YHK3 1445 aa26.25■■□□□ 1.79
FAM49B-214ENST00000519540 HIRIP3Q9BW71 556 aaPredicted RBP26.25■■□□□ 1.79
FAM49B-214ENST00000519540 MAGI2Q86UL8 1455 aa26.23■■□□□ 1.79
FAM49B-214ENST00000519540 IQGAP3Q86VI3 1631 aa26.23■■□□□ 1.79
FAM49B-214ENST00000519540 CYB5RLQ6IPT4 315 aa26.23■■□□□ 1.79
FAM49B-214ENST00000519540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.23■■□□□ 1.79
FAM49B-214ENST00000519540 INO80Q9ULG1 1556 aaPredicted RBP26.23■■□□□ 1.79
FAM49B-214ENST00000519540 RIMBP3CA6NJZ7 1639 aa26.23■■□□□ 1.79
FAM49B-214ENST00000519540 RIMBP3BA6NNM3 1639 aa26.23■■□□□ 1.79
FAM49B-214ENST00000519540 RIMBP3Q9UFD9 1639 aa26.23■■□□□ 1.79
FAM49B-214ENST00000519540 ATP7AQ04656 1500 aa26.22■■□□□ 1.79
FAM49B-214ENST00000519540 NBPF8Q3BBV2 869 aa26.2■■□□□ 1.78
FAM49B-214ENST00000519540 CFAP74Q9C0B2 1584 aa26.18■■□□□ 1.78
FAM49B-214ENST00000519540 ZNF518AQ6AHZ1 1483 aa26.14■■□□□ 1.77
FAM49B-214ENST00000519540 DDX10Q13206 875 aaKnown RBP26.13■■□□□ 1.77
FAM49B-214ENST00000519540 HSPA5P11021 654 aaKnown RBP26.12■■□□□ 1.77
FAM49B-214ENST00000519540 EIF4G2P78344 907 aaKnown RBP eCLIP26.12■■□□□ 1.77
FAM49B-214ENST00000519540 MYT1LQ9UL68 1186 aa26.11■■□□□ 1.77
FAM49B-214ENST00000519540 PLA2R1Q13018 1463 aa26.11■■□□□ 1.77
FAM49B-214ENST00000519540 KIDINS220Q9ULH0 1771 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms