RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 POM121Q96HA1 1249 aa9.14□□□□□ -0.95
TRAPPC11-209ENST00000512476 PLCD3Q8N3E9 789 aa9.14□□□□□ -0.95
TRAPPC11-209ENST00000512476 FLIIQ13045 1269 aa9.13□□□□□ -0.95
TRAPPC11-209ENST00000512476 IGSF5Q9NSI5 407 aa9.13□□□□□ -0.95
TRAPPC11-209ENST00000512476 AK7Q96M32 723 aa9.13□□□□□ -0.95
TRAPPC11-209ENST00000512476 CARNS1A5YM72 827 aa9.12□□□□□ -0.95
TRAPPC11-209ENST00000512476 PDE4DQ08499 809 aa9.12□□□□□ -0.95
TRAPPC11-209ENST00000512476 ARIH1Q9Y4X5 557 aaPredicted RBP9.11□□□□□ -0.95
TRAPPC11-209ENST00000512476 CC2D2BQ6DHV5 1058 aa9.1□□□□□ -0.95
TRAPPC11-209ENST00000512476 TRIM66O15016 1216 aa9.1□□□□□ -0.95
TRAPPC11-209ENST00000512476 CLSTN1O94985 981 aa9.08□□□□□ -0.96
TRAPPC11-209ENST00000512476 FNBP4Q8N3X1 1017 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC11-209ENST00000512476 CCDC97Q96F63 343 aaPredicted RBP9.07□□□□□ -0.96
TRAPPC11-209ENST00000512476 PRDM10Q9NQV6 1147 aa9.07□□□□□ -0.96
TRAPPC11-209ENST00000512476 MCM6Q14566 821 aa9.05□□□□□ -0.96
TRAPPC11-209ENST00000512476 BRD1O95696 1058 aa9.04□□□□□ -0.96
TRAPPC11-209ENST00000512476 PROSER2Q86WR7 435 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC11-209ENST00000512476 ARHGEF1Q92888 912 aaKnown RBP9.04□□□□□ -0.96
TRAPPC11-209ENST00000512476 KIAA1522Q9P206 1035 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC11-209ENST00000512476 SERPINA10Q9UK55 444 aa9.04□□□□□ -0.96
TRAPPC11-209ENST00000512476 AMOTL2Q9Y2J4 779 aa9.04□□□□□ -0.96
TRAPPC11-209ENST00000512476 RBM26Q5T8P6 1007 aaKnown RBP9.03□□□□□ -0.96
TRAPPC11-209ENST00000512476 MYT1LQ9UL68 1186 aa9.03□□□□□ -0.96
TRAPPC11-209ENST00000512476 MIER1Q8N108 512 aa9.03□□□□□ -0.96
TRAPPC11-209ENST00000512476 KRI1Q8N9T8 703 aaKnown RBP9.02□□□□□ -0.96
TRAPPC11-209ENST00000512476 SIRT1Q96EB6 747 aa9.01□□□□□ -0.97
TRAPPC11-209ENST00000512476 PLSCR2Q9NRY7 297 aa9.01□□□□□ -0.97
TRAPPC11-209ENST00000512476 RIOK3O14730 519 aaKnown RBP8.99□□□□□ -0.97
TRAPPC11-209ENST00000512476 SPATA32Q96LK8 384 aa8.99□□□□□ -0.97
TRAPPC11-209ENST00000512476 LOC102724159A0A0B4J2E5 919 aa8.98□□□□□ -0.97
TRAPPC11-209ENST00000512476 PWP2Q15269 919 aaKnown RBP8.98□□□□□ -0.97
TRAPPC11-209ENST00000512476 ZNF662Q6ZS27 426 aa8.97□□□□□ -0.97
TRAPPC11-209ENST00000512476 STK24Q9Y6E0 443 aa8.97□□□□□ -0.97
TRAPPC11-209ENST00000512476 U3KPZ7 1027 aaPredicted RBP8.96□□□□□ -0.97
TRAPPC11-209ENST00000512476 ZEB1P37275 1124 aaPredicted RBP8.95□□□□□ -0.98
TRAPPC11-209ENST00000512476 NOL8Q76FK4 1167 aaKnown RBP8.94□□□□□ -0.98
TRAPPC11-209ENST00000512476 TEX2Q8IWB9 1127 aa8.93□□□□□ -0.98
TRAPPC11-209ENST00000512476 IVNS1ABPQ9Y6Y0 642 aa8.93□□□□□ -0.98
TRAPPC11-209ENST00000512476 MARCH6O60337 910 aa8.93□□□□□ -0.98
TRAPPC11-209ENST00000512476 E2F4Q16254 413 aa8.93□□□□□ -0.98
TRAPPC11-209ENST00000512476 RIPOR2Q9Y4F9 1068 aa8.92□□□□□ -0.98
TRAPPC11-209ENST00000512476 NAP1L5Q96NT1 182 aaPredicted RBP8.92□□□□□ -0.98
TRAPPC11-209ENST00000512476 ZCCHC6Q5VYS8 1495 aaKnown RBP8.92□□□□□ -0.98
TRAPPC11-209ENST00000512476 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.91□□□□□ -0.98
TRAPPC11-209ENST00000512476 SLC52A1Q9NWF4 448 aa8.91□□□□□ -0.98
TRAPPC11-209ENST00000512476 SKIV2LQ15477 1246 aaKnown RBP8.9□□□□□ -0.98
TRAPPC11-209ENST00000512476 MRRFQ96E11 262 aaKnown RBP8.9□□□□□ -0.98
TRAPPC11-209ENST00000512476 MLLT3P42568 568 aaPredicted RBP8.9□□□□□ -0.99
TRAPPC11-209ENST00000512476 GIMAP6Q6P9H5 292 aa8.9□□□□□ -0.99
TRAPPC11-209ENST00000512476 PPP1R1BQ9UD71 204 aaPredicted RBP8.9□□□□□ -0.99
TRAPPC11-209ENST00000512476 ANKRD13AQ8IZ07 590 aa8.89□□□□□ -0.99
TRAPPC11-209ENST00000512476 GPIHBP1Q8IV16 184 aa8.89□□□□□ -0.99
TRAPPC11-209ENST00000512476 ANKRD62A6NC57 917 aa8.88□□□□□ -0.99
TRAPPC11-209ENST00000512476 SND1Q7KZF4 910 aaKnown RBP eCLIP8.88□□□□□ -0.99
TRAPPC11-209ENST00000512476 PARP9Q8IXQ6 854 aa8.87□□□□□ -0.99
TRAPPC11-209ENST00000512476 DDRGK1Q96HY6 314 aa8.87□□□□□ -0.99
TRAPPC11-209ENST00000512476 ZC3H4Q9UPT8 1303 aaKnown RBP8.86□□□□□ -0.99
TRAPPC11-209ENST00000512476 TXNDC2Q86VQ3 553 aa8.86□□□□□ -0.99
TRAPPC11-209ENST00000512476 FOSBP53539 338 aa8.85□□□□□ -0.99
TRAPPC11-209ENST00000512476 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.85□□□□□ -0.993e-6■■□□□ 13.4
TRAPPC11-209ENST00000512476 PPME1Q9Y570 386 aa8.85□□□□□ -0.99
TRAPPC11-209ENST00000512476 RBM47A0AV96 593 aaKnown RBP8.84□□□□□ -0.99
TRAPPC11-209ENST00000512476 ZNF326Q5BKZ1 582 aaKnown RBP8.84□□□□□ -0.99
TRAPPC11-209ENST00000512476 CNPY4Q8N129 248 aa8.84□□□□□ -0.99
TRAPPC11-209ENST00000512476 KCNA1Q09470 495 aa8.84□□□□□ -0.99
TRAPPC11-209ENST00000512476 CENPBP07199 599 aaPredicted RBP8.83□□□□□ -1
TRAPPC11-209ENST00000512476 HIRIP3Q9BW71 556 aaPredicted RBP8.83□□□□□ -1
TRAPPC11-209ENST00000512476 SUGT1Q9Y2Z0 365 aa8.83□□□□□ -1
TRAPPC11-209ENST00000512476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.83□□□□□ -1
TRAPPC11-209ENST00000512476 HNRNPUL2Q1KMD3 747 aaKnown RBP8.83□□□□□ -1
TRAPPC11-209ENST00000512476 MICAL1Q8TDZ2 1067 aa8.83□□□□□ -1
TRAPPC11-209ENST00000512476 DRC1Q96MC2 740 aa8.83□□□□□ -1
TRAPPC11-209ENST00000512476 DMRT2Q9Y5R5 561 aa8.83□□□□□ -1
TRAPPC11-209ENST00000512476 VGFO15240 615 aaPredicted RBP8.82□□□□□ -1
TRAPPC11-209ENST00000512476 NCLP19338 710 aaKnown RBP8.82□□□□□ -1
TRAPPC11-209ENST00000512476 FAM50AQ14320 339 aaKnown RBP8.82□□□□□ -1
TRAPPC11-209ENST00000512476 EXOC8Q8IYI6 725 aa8.82□□□□□ -1
TRAPPC11-209ENST00000512476 SGSM3Q96HU1 749 aa8.82□□□□□ -1
TRAPPC11-209ENST00000512476 COG6Q9Y2V7 657 aa8.82□□□□□ -1
TRAPPC11-209ENST00000512476 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.82□□□□□ -1
TRAPPC11-209ENST00000512476 RAB11FIP3O75154 756 aa8.82□□□□□ -1
TRAPPC11-209ENST00000512476 RBM27Q9P2N5 1060 aaKnown RBP8.81□□□□□ -1
TRAPPC11-209ENST00000512476 STAG3Q9UJ98 1225 aa8.81□□□□□ -1
TRAPPC11-209ENST00000512476 NOM1Q5C9Z4 860 aaKnown RBP8.8□□□□□ -1
TRAPPC11-209ENST00000512476 ZNF330Q9Y3S2 320 aaPredicted RBP8.8□□□□□ -1
TRAPPC11-209ENST00000512476 SREK1Q8WXA9 508 aaKnown RBP8.8□□□□□ -1
TRAPPC11-209ENST00000512476 PLCD4Q9BRC7 762 aa8.8□□□□□ -1
TRAPPC11-209ENST00000512476 PLEKHD1A6NEE1 506 aa8.79□□□□□ -1
TRAPPC11-209ENST00000512476 MSH5O43196 834 aa8.79□□□□□ -1
TRAPPC11-209ENST00000512476 ANAPC15P60006 121 aa8.79□□□□□ -1
TRAPPC11-209ENST00000512476 FOXD4L6Q3SYB3 417 aaPredicted RBP8.79□□□□□ -1
TRAPPC11-209ENST00000512476 FOXD4L3Q6VB84 417 aaPredicted RBP8.79□□□□□ -1
TRAPPC11-209ENST00000512476 RYDENQ9NUL5 291 aaKnown RBP8.79□□□□□ -1
TRAPPC11-209ENST00000512476 DCAF1Q9Y4B6 1507 aa8.78□□□□□ -1
TRAPPC11-209ENST00000512476 AAMPQ13685 434 aa8.78□□□□□ -1
TRAPPC11-209ENST00000512476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.78□□□□□ -1
TRAPPC11-209ENST00000512476 TCF3P15923 654 aa8.78□□□□□ -1
TRAPPC11-209ENST00000512476 CANXP27824 592 aaKnown RBP8.78□□□□□ -1
TRAPPC11-209ENST00000512476 EVI5LQ96CN4 794 aa8.78□□□□□ -1
TRAPPC11-209ENST00000512476 PPP1R15AO75807 674 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms