RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 MLLT3P42568 568 aaPredicted RBP10.6□□□□□ -0.71
HMGB1P3-201ENST00000502802 BMP2KQ9NSY1 1161 aaPredicted RBP10.59□□□□□ -0.71
HMGB1P3-201ENST00000502802 RBM26Q5T8P6 1007 aaKnown RBP10.58□□□□□ -0.72
HMGB1P3-201ENST00000502802 GPIHBP1Q8IV16 184 aa10.58□□□□□ -0.72
HMGB1P3-201ENST00000502802 TRIM35Q9UPQ4 493 aa10.57□□□□□ -0.72
HMGB1P3-201ENST00000502802 SPDYE16A6NNV3 312 aaPredicted RBP10.56□□□□□ -0.72
HMGB1P3-201ENST00000502802 AK7Q96M32 723 aa10.56□□□□□ -0.72
HMGB1P3-201ENST00000502802 DPYSL4O14531 572 aa10.55□□□□□ -0.72
HMGB1P3-201ENST00000502802 DSG2Q14126 1118 aa10.55□□□□□ -0.72
HMGB1P3-201ENST00000502802 EMILIN3Q9NT22 766 aa10.55□□□□□ -0.72
HMGB1P3-201ENST00000502802 DPY19L2Q6NUT2 758 aa10.54□□□□□ -0.72
HMGB1P3-201ENST00000502802 PDIA6Q15084 440 aa10.53□□□□□ -0.72
HMGB1P3-201ENST00000502802 MICALL2Q8IY33 904 aa10.53□□□□□ -0.72
HMGB1P3-201ENST00000502802 KRI1Q8N9T8 703 aaKnown RBP10.53□□□□□ -0.72
HMGB1P3-201ENST00000502802 TMC2Q8TDI7 906 aa10.53□□□□□ -0.72
HMGB1P3-201ENST00000502802 FOXK1P85037 733 aa10.52□□□□□ -0.73
HMGB1P3-201ENST00000502802 GALR2O43603 387 aaPredicted RBP10.51□□□□□ -0.73
HMGB1P3-201ENST00000502802 DAXXQ9UER7 740 aaPredicted RBP10.49□□□□□ -0.73
HMGB1P3-201ENST00000502802 CLCN6P51797 869 aa10.48□□□□□ -0.73
HMGB1P3-201ENST00000502802 PDCD7Q8N8D1 485 aaKnown RBP10.48□□□□□ -0.73
HMGB1P3-201ENST00000502802 PLPP6Q8IY26 295 aa10.46□□□□□ -0.73
HMGB1P3-201ENST00000502802 ARXQ96QS3 562 aa10.46□□□□□ -0.73
HMGB1P3-201ENST00000502802 TMEM121BQ9BXQ6 578 aaPredicted RBP10.45□□□□□ -0.74
HMGB1P3-201ENST00000502802 BOLA1Q9Y3E2 137 aa10.45□□□□□ -0.74
HMGB1P3-201ENST00000502802 ATN1P54259 1190 aaPredicted RBP10.44□□□□□ -0.74
HMGB1P3-201ENST00000502802 IRX5P78411 483 aaPredicted RBP10.44□□□□□ -0.74
HMGB1P3-201ENST00000502802 OCEL1Q9H607 264 aa10.44□□□□□ -0.74
HMGB1P3-201ENST00000502802 GPBP1L1Q9HC44 474 aaPredicted RBP10.44□□□□□ -0.74
HMGB1P3-201ENST00000502802 C2orf72A6NCS6 295 aa10.43□□□□□ -0.74
HMGB1P3-201ENST00000502802 G3V3G9 751 aa10.43□□□□□ -0.74
HMGB1P3-201ENST00000502802 TRIM66O15016 1216 aa10.43□□□□□ -0.74
HMGB1P3-201ENST00000502802 KIF3CO14782 793 aa10.42□□□□□ -0.74
HMGB1P3-201ENST00000502802 IER5LQ5T953 404 aa10.42□□□□□ -0.74
HMGB1P3-201ENST00000502802 MAP3K9P80192 1104 aa10.41□□□□□ -0.74
HMGB1P3-201ENST00000502802 PDE4DQ08499 809 aa10.41□□□□□ -0.74
HMGB1P3-201ENST00000502802 KDM4CQ9H3R0 1056 aa10.41□□□□□ -0.74
HMGB1P3-201ENST00000502802 GPR37O15354 613 aa10.4□□□□□ -0.74
HMGB1P3-201ENST00000502802 ATMINO43313 823 aaPredicted RBP10.4□□□□□ -0.74
HMGB1P3-201ENST00000502802 GRXCR2A6NFK2 248 aa10.39□□□□□ -0.75
HMGB1P3-201ENST00000502802 IL27Q8NEV9 243 aa10.39□□□□□ -0.75
HMGB1P3-201ENST00000502802 HAX1O00165 279 aa10.38□□□□□ -0.75
HMGB1P3-201ENST00000502802 ASTLQ6HA08 431 aaPredicted RBP10.38□□□□□ -0.75
HMGB1P3-201ENST00000502802 MINK1Q8N4C8 1332 aaPredicted RBP10.36□□□□□ -0.75
HMGB1P3-201ENST00000502802 PLCG2P16885 1265 aa10.36□□□□□ -0.75
HMGB1P3-201ENST00000502802 NUTM2FA1L443 756 aa10.35□□□□□ -0.75
HMGB1P3-201ENST00000502802 L3MBTL3Q96JM7 780 aaPredicted RBP10.35□□□□□ -0.75
HMGB1P3-201ENST00000502802 EVX2Q03828 476 aa10.34□□□□□ -0.75
HMGB1P3-201ENST00000502802 OSBPP22059 807 aa10.33□□□□□ -0.76
HMGB1P3-201ENST00000502802 PTGER2P43116 358 aa10.33□□□□□ -0.76
HMGB1P3-201ENST00000502802 MAP2K5Q13163 448 aa10.33□□□□□ -0.76
HMGB1P3-201ENST00000502802 UPF1Q92900 1129 aaKnown RBP eCLIP10.33□□□□□ -0.76
HMGB1P3-201ENST00000502802 OXER1Q8TDS5 423 aa10.32□□□□□ -0.76
HMGB1P3-201ENST00000502802 IRF6O14896 467 aa10.3□□□□□ -0.76
HMGB1P3-201ENST00000502802 TBC1D12O60347 775 aa10.3□□□□□ -0.76
HMGB1P3-201ENST00000502802 HOMEZQ8IX15 550 aa10.3□□□□□ -0.76
HMGB1P3-201ENST00000502802 CCDC102AQ96A19 550 aa10.3□□□□□ -0.76
HMGB1P3-201ENST00000502802 SUPT5HO00267 1087 aaKnown RBP10.29□□□□□ -0.76
HMGB1P3-201ENST00000502802 GNPATO15228 680 aa10.29□□□□□ -0.76
HMGB1P3-201ENST00000502802 TMEM92Q6UXU6 159 aa10.29□□□□□ -0.76
HMGB1P3-201ENST00000502802 FCHSD2O94868 740 aa10.28□□□□□ -0.76
HMGB1P3-201ENST00000502802 HIC1Q14526 733 aa10.28□□□□□ -0.76
HMGB1P3-201ENST00000502802 DDX12PQ92771 950 aa10.28□□□□□ -0.76
HMGB1P3-201ENST00000502802 AMHR2Q16671 573 aa10.27□□□□□ -0.77
HMGB1P3-201ENST00000502802 FAM117AQ9C073 453 aa10.27□□□□□ -0.77
HMGB1P3-201ENST00000502802 EVI5O60447 810 aa10.25□□□□□ -0.77
HMGB1P3-201ENST00000502802 SEC24BO95487 1268 aa10.25□□□□□ -0.77
HMGB1P3-201ENST00000502802 DDRGK1Q96HY6 314 aa10.25□□□□□ -0.77
HMGB1P3-201ENST00000502802 ZNF316A6NFI3 1004 aaPredicted RBP10.24□□□□□ -0.77
HMGB1P3-201ENST00000502802 FECHP22830 423 aa10.23□□□□□ -0.77
HMGB1P3-201ENST00000502802 PARP9Q8IXQ6 854 aa10.22□□□□□ -0.77
HMGB1P3-201ENST00000502802 PRIM1P49642 420 aaKnown RBP10.21□□□□□ -0.77
HMGB1P3-201ENST00000502802 PTGDRQ13258 359 aa10.21□□□□□ -0.77
HMGB1P3-201ENST00000502802 ZMYND15Q9H091 742 aa10.21□□□□□ -0.77
HMGB1P3-201ENST00000502802 COLQQ9Y215 455 aaPredicted RBP10.21□□□□□ -0.77
HMGB1P3-201ENST00000502802 PLEKHG3A1L390 1219 aa10.2□□□□□ -0.78
HMGB1P3-201ENST00000502802 PTCD2Q8WV60 388 aaKnown RBP10.2□□□□□ -0.78
HMGB1P3-201ENST00000502802 PELP1Q8IZL8 1130 aaKnown RBP10.19□□□□□ -0.78
HMGB1P3-201ENST00000502802 GABBR2O75899 941 aa10.18□□□□□ -0.78
HMGB1P3-201ENST00000502802 SLC39A7Q92504 469 aa10.18□□□□□ -0.78
HMGB1P3-201ENST00000502802 TTLL12Q14166 644 aaPredicted RBP10.17□□□□□ -0.78
HMGB1P3-201ENST00000502802 DCBLD2Q96PD2 775 aa10.17□□□□□ -0.78
HMGB1P3-201ENST00000502802 ANO8Q9HCE9 1232 aaPredicted RBP10.17□□□□□ -0.78
HMGB1P3-201ENST00000502802 SLC34A2O95436 690 aa10.15□□□□□ -0.78
HMGB1P3-201ENST00000502802 C3orf67Q6ZVT6 689 aa10.14□□□□□ -0.79
HMGB1P3-201ENST00000502802 EPAS1Q99814 870 aa10.14□□□□□ -0.79
HMGB1P3-201ENST00000502802 RSPH6AQ9H0K4 717 aa10.14□□□□□ -0.79
HMGB1P3-201ENST00000502802 GOPCQ9HD26 462 aa10.14□□□□□ -0.79
HMGB1P3-201ENST00000502802 POTEFA5A3E0 1075 aa10.13□□□□□ -0.79
HMGB1P3-201ENST00000502802 PHF14O94880 888 aa10.13□□□□□ -0.79
HMGB1P3-201ENST00000502802 C7P10643 843 aa10.13□□□□□ -0.79
HMGB1P3-201ENST00000502802 EN1Q05925 392 aaPredicted RBP10.12□□□□□ -0.79
HMGB1P3-201ENST00000502802 GIGYF2Q6Y7W6 1299 aaKnown RBP10.12□□□□□ -0.79
HMGB1P3-201ENST00000502802 CDHR5Q9HBB8 845 aa10.1□□□□□ -0.79
HMGB1P3-201ENST00000502802 NPDC1Q9NQX5 325 aaPredicted RBP10.1□□□□□ -0.79
HMGB1P3-201ENST00000502802 MAP3K7O43318 606 aa10.09□□□□□ -0.79
HMGB1P3-201ENST00000502802 MS4A1P11836 297 aa10.09□□□□□ -0.79
HMGB1P3-201ENST00000502802 FLIIQ13045 1269 aa10.08□□□□□ -0.8
HMGB1P3-201ENST00000502802 REPIN1Q9BWE0 567 aaKnown RBP10.08□□□□□ -0.8
HMGB1P3-201ENST00000502802 METRNQ9UJH8 293 aa10.08□□□□□ -0.8
HMGB1P3-201ENST00000502802 RBM33Q96EV2 1170 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms