RNA–Protein interactions for RNA: ENST00000487223.5

CAPN2-209, Transcript of calpain 2, humanhuman

TSL 2

Gene CAPN2, Length 2,991 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-209ENST00000487223 CCDC18Q5T9S5 1454 aa10.46□□□□□ -0.73
CAPN2-209ENST00000487223 ZNF142P52746 1687 aaPredicted RBP10.46□□□□□ -0.74
CAPN2-209ENST00000487223 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.45□□□□□ -0.74
CAPN2-209ENST00000487223 SUPT5HO00267 1087 aaKnown RBP10.45□□□□□ -0.74
CAPN2-209ENST00000487223 FER1L4A9Z1Z3 1794 aa10.45□□□□□ -0.74
CAPN2-209ENST00000487223 KIF14Q15058 1648 aa10.45□□□□□ -0.74
CAPN2-209ENST00000487223 FMN1Q68DA7 1419 aa10.45□□□□□ -0.74
CAPN2-209ENST00000487223 PREX2Q70Z35 1606 aa10.44□□□□□ -0.74
CAPN2-209ENST00000487223 MADDQ8WXG6 1647 aa10.44□□□□□ -0.74
CAPN2-209ENST00000487223 ITSN2Q9NZM3 1697 aa10.44□□□□□ -0.74
CAPN2-209ENST00000487223 C9orf84Q5VXU9 1444 aa10.43□□□□□ -0.74
CAPN2-209ENST00000487223 PLCH2O75038 1416 aa10.43□□□□□ -0.74
CAPN2-209ENST00000487223 MLH3Q9UHC1 1453 aa10.43□□□□□ -0.74
CAPN2-209ENST00000487223 CNTLNQ9NXG0 1405 aa10.43□□□□□ -0.74
CAPN2-209ENST00000487223 PTPRTO14522 1441 aa10.42□□□□□ -0.74
CAPN2-209ENST00000487223 LMTK3Q96Q04 1460 aa10.41□□□□□ -0.74
CAPN2-209ENST00000487223 APLP2Q06481 763 aa10.4□□□□□ -0.74
CAPN2-209ENST00000487223 NPATQ14207 1427 aa10.4□□□□□ -0.74
CAPN2-209ENST00000487223 ATP10AO60312 1499 aa10.4□□□□□ -0.74
CAPN2-209ENST00000487223 PLEKHH2Q8IVE3 1493 aa10.4□□□□□ -0.74
CAPN2-209ENST00000487223 ZNF518AQ6AHZ1 1483 aa10.4□□□□□ -0.75
CAPN2-209ENST00000487223 RIMS1Q86UR5 1692 aaKnown RBP10.39□□□□□ -0.75
CAPN2-209ENST00000487223 DAXXQ9UER7 740 aaPredicted RBP10.39□□□□□ -0.75
CAPN2-209ENST00000487223 FBXO41Q8TF61 875 aa10.38□□□□□ -0.75
CAPN2-209ENST00000487223 ABCC1P33527 1531 aa10.37□□□□□ -0.75
CAPN2-209ENST00000487223 ADGBQ8N7X0 1667 aa10.36□□□□□ -0.75
CAPN2-209ENST00000487223 PLXNC1O60486 1568 aa10.36□□□□□ -0.75
CAPN2-209ENST00000487223 DIP2CQ9Y2E4 1556 aa10.36□□□□□ -0.75
CAPN2-209ENST00000487223 CLIP1P30622 1438 aa10.35□□□□□ -0.75
CAPN2-209ENST00000487223 FYCO1Q9BQS8 1478 aa10.35□□□□□ -0.75
CAPN2-209ENST00000487223 PLA2R1Q13018 1463 aa10.34□□□□□ -0.75
CAPN2-209ENST00000487223 TROQ12816 1431 aaPredicted RBP10.34□□□□□ -0.75
CAPN2-209ENST00000487223 INO80Q9ULG1 1556 aaPredicted RBP10.33□□□□□ -0.76
CAPN2-209ENST00000487223 KIAA1107Q9UPP5 1409 aa10.33□□□□□ -0.76
CAPN2-209ENST00000487223 CASKIN1Q8WXD9 1431 aa10.32□□□□□ -0.76
CAPN2-209ENST00000487223 ZC3H13Q5T200 1668 aaKnown RBP10.31□□□□□ -0.76
CAPN2-209ENST00000487223 CDC42BPBQ9Y5S2 1711 aa10.31□□□□□ -0.76
CAPN2-209ENST00000487223 ZBTB22O15209 634 aa10.3□□□□□ -0.76
CAPN2-209ENST00000487223 KDM5AP29375 1690 aaKnown RBP10.29□□□□□ -0.76
CAPN2-209ENST00000487223 ABCA6Q8N139 1617 aa10.29□□□□□ -0.76
CAPN2-209ENST00000487223 SIGLEC1Q9BZZ2 1709 aa10.29□□□□□ -0.76
CAPN2-209ENST00000487223 C3P01024 1663 aa10.29□□□□□ -0.76
CAPN2-209ENST00000487223 DMRT2Q9Y5R5 561 aa10.29□□□□□ -0.76
CAPN2-209ENST00000487223 SETD1BQ9UPS6 1966 aaKnown RBP10.28□□□□□ -0.76
CAPN2-209ENST00000487223 MAST1Q9Y2H9 1570 aa10.28□□□□□ -0.76
CAPN2-209ENST00000487223 EIF2AK4Q9P2K8 1649 aaKnown RBP10.28□□□□□ -0.76
CAPN2-209ENST00000487223 RTEL1-TNFRSF6BF6WH68 1400 aa10.28□□□□□ -0.76
CAPN2-209ENST00000487223 CDC42BPAQ5VT25 1732 aa10.27□□□□□ -0.76
CAPN2-209ENST00000487223 LRRIQ1Q96JM4 1722 aa10.27□□□□□ -0.76
CAPN2-209ENST00000487223 STRCQ7RTU9 1775 aa10.27□□□□□ -0.77
CAPN2-209ENST00000487223 PPP4R3CPQ6ZMV5 832 aa10.26□□□□□ -0.77
CAPN2-209ENST00000487223 DEPDC5O75140 1603 aa10.26□□□□□ -0.77
CAPN2-209ENST00000487223 MAP3K1Q13233 1512 aa10.26□□□□□ -0.77
CAPN2-209ENST00000487223 CDK11AQ9UQ88 783 aaPredicted RBP10.26□□□□□ -0.77
CAPN2-209ENST00000487223 RTN4Q9NQC3 1192 aaKnown RBP10.26□□□□□ -0.77
CAPN2-209ENST00000487223 KIDINS220Q9ULH0 1771 aa10.25□□□□□ -0.77
CAPN2-209ENST00000487223 YEATS2Q9ULM3 1422 aa10.25□□□□□ -0.77
CAPN2-209ENST00000487223 ARHGEF5Q12774 1597 aa10.25□□□□□ -0.77
CAPN2-209ENST00000487223 PLEKHD1A6NEE1 506 aa10.25□□□□□ -0.77
CAPN2-209ENST00000487223 ARHGAP35Q9NRY4 1499 aa10.24□□□□□ -0.77
CAPN2-209ENST00000487223 ERICH6Q7L0X2 663 aa10.24□□□□□ -0.77
CAPN2-209ENST00000487223 SAMD9LQ8IVG5 1584 aa10.23□□□□□ -0.77
CAPN2-209ENST00000487223 KDM5DQ9BY66 1539 aa10.23□□□□□ -0.77
CAPN2-209ENST00000487223 SYNMO15061 1565 aa10.23□□□□□ -0.77
CAPN2-209ENST00000487223 RNF17Q9BXT8 1623 aaKnown RBP10.23□□□□□ -0.77
CAPN2-209ENST00000487223 EHBP1L1Q8N3D4 1523 aa10.23□□□□□ -0.77
CAPN2-209ENST00000487223 LTBP4Q8N2S1 1624 aa10.22□□□□□ -0.77
CAPN2-209ENST00000487223 CAMSAP2Q08AD1 1489 aa10.22□□□□□ -0.77
CAPN2-209ENST00000487223 CPS1P31327 1500 aa10.22□□□□□ -0.77
CAPN2-209ENST00000487223 MYO3AQ8NEV4 1616 aa10.22□□□□□ -0.77
CAPN2-209ENST00000487223 ILDR1Q86SU0 546 aaPredicted RBP10.21□□□□□ -0.77
CAPN2-209ENST00000487223 UHRF1BP1Q6BDS2 1440 aa10.21□□□□□ -0.77
CAPN2-209ENST00000487223 TRAPPC8Q9Y2L5 1435 aa10.21□□□□□ -0.77
CAPN2-209ENST00000487223 NCOA1Q15788 1441 aa10.21□□□□□ -0.78
CAPN2-209ENST00000487223 POLR1AO95602 1720 aaPredicted RBP10.21□□□□□ -0.78
CAPN2-209ENST00000487223 EFCAB2Q5VUJ9 269 aa10.2□□□□□ -0.78
CAPN2-209ENST00000487223 SCAPERQ9BY12 1400 aa10.2□□□□□ -0.78
CAPN2-209ENST00000487223 ARHGAP5Q13017 1502 aa10.19□□□□□ -0.78
CAPN2-209ENST00000487223 TCOF1Q13428 1488 aaKnown RBP10.19□□□□□ -0.78
CAPN2-209ENST00000487223 ATP7AQ04656 1500 aa10.18□□□□□ -0.78
CAPN2-209ENST00000487223 CDK13Q14004 1512 aaKnown RBP10.16□□□□□ -0.78
CAPN2-209ENST00000487223 CEP162Q5TB80 1403 aa10.16□□□□□ -0.78
CAPN2-209ENST00000487223 MED14O60244 1454 aa10.15□□□□□ -0.78
CAPN2-209ENST00000487223 NCOA2Q15596 1464 aa10.15□□□□□ -0.79
CAPN2-209ENST00000487223 CEP170BQ9Y4F5 1589 aaPredicted RBP10.14□□□□□ -0.79
CAPN2-209ENST00000487223 NPM3O75607 178 aaKnown RBP10.14□□□□□ -0.79
CAPN2-209ENST00000487223 A2ML1A8K2U0 1454 aa10.14□□□□□ -0.79
CAPN2-209ENST00000487223 NLRP1Q9C000 1473 aa10.14□□□□□ -0.79
CAPN2-209ENST00000487223 RSPH4AQ5TD94 716 aa10.14□□□□□ -0.79
CAPN2-209ENST00000487223 SPATA31D1Q6ZQQ2 1576 aa10.13□□□□□ -0.79
CAPN2-209ENST00000487223 PTPN23Q9H3S7 1636 aa10.12□□□□□ -0.79
CAPN2-209ENST00000487223 SUPT6HQ7KZ85 1726 aaKnown RBP10.11□□□□□ -0.79
CAPN2-209ENST00000487223 PKD2Q13563 968 aa10.11□□□□□ -0.79
CAPN2-209ENST00000487223 SHANK2Q9UPX8 1470 aa10.11□□□□□ -0.79
CAPN2-209ENST00000487223 GPATCH8Q9UKJ3 1502 aaKnown RBP10.1□□□□□ -0.79
CAPN2-209ENST00000487223 TIAM1Q13009 1591 aa10.1□□□□□ -0.79
CAPN2-209ENST00000487223 PZPP20742 1482 aa10.1□□□□□ -0.79
CAPN2-209ENST00000487223 PTPRKQ15262 1439 aa10.1□□□□□ -0.79
CAPN2-209ENST00000487223 A2MP01023 1474 aa10.1□□□□□ -0.79
CAPN2-209ENST00000487223 CERKQ8TCT0 537 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms