RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 GABBR2O75899 941 aa10.79□□□□□ -0.68
PRPF38A-203ENST00000487160 PPP1R15BQ5SWA1 713 aa10.79□□□□□ -0.68
PRPF38A-203ENST00000487160 ARIH1Q9Y4X5 557 aaPredicted RBP10.79□□□□□ -0.68
PRPF38A-203ENST00000487160 IER5LQ5T953 404 aa10.78□□□□□ -0.68
PRPF38A-203ENST00000487160 BOLA1Q9Y3E2 137 aa10.75□□□□□ -0.69
PRPF38A-203ENST00000487160 PLCG2P16885 1265 aa10.74□□□□□ -0.69
PRPF38A-203ENST00000487160 DSG2Q14126 1118 aa10.74□□□□□ -0.69
PRPF38A-203ENST00000487160 TMC2Q8TDI7 906 aa10.74□□□□□ -0.69
PRPF38A-203ENST00000487160 TMEM121BQ9BXQ6 578 aaPredicted RBP10.74□□□□□ -0.69
PRPF38A-203ENST00000487160 G3V3G9 751 aa10.72□□□□□ -0.69
PRPF38A-203ENST00000487160 PELP1Q8IZL8 1130 aaKnown RBP10.72□□□□□ -0.69
PRPF38A-203ENST00000487160 EMILIN3Q9NT22 766 aa10.72□□□□□ -0.69
PRPF38A-203ENST00000487160 FOXK1P85037 733 aa10.71□□□□□ -0.69
PRPF38A-203ENST00000487160 SMYD5Q6GMV2 418 aa10.71□□□□□ -0.69
PRPF38A-203ENST00000487160 DCBLD2Q96PD2 775 aa10.71□□□□□ -0.69
PRPF38A-203ENST00000487160 ZC3H15Q8WU90 426 aaKnown RBP10.7□□□□□ -0.7
PRPF38A-203ENST00000487160 C2orf72A6NCS6 295 aa10.69□□□□□ -0.7
PRPF38A-203ENST00000487160 DPYSL4O14531 572 aa10.68□□□□□ -0.7
PRPF38A-203ENST00000487160 SEC24BO95487 1268 aa10.68□□□□□ -0.7
PRPF38A-203ENST00000487160 L3MBTL3Q96JM7 780 aaPredicted RBP10.68□□□□□ -0.7
PRPF38A-203ENST00000487160 PLPP6Q8IY26 295 aa10.67□□□□□ -0.7
PRPF38A-203ENST00000487160 COLQQ9Y215 455 aaPredicted RBP10.67□□□□□ -0.7
PRPF38A-203ENST00000487160 KIF3CO14782 793 aa10.66□□□□□ -0.7
PRPF38A-203ENST00000487160 POTEHQ6S545 545 aa10.66□□□□□ -0.7
PRPF38A-203ENST00000487160 MLLT3P42568 568 aaPredicted RBP10.65□□□□□ -0.7
PRPF38A-203ENST00000487160 SLC39A7Q92504 469 aa10.63□□□□□ -0.71
PRPF38A-203ENST00000487160 POTEFA5A3E0 1075 aa10.62□□□□□ -0.71
PRPF38A-203ENST00000487160 SPDYE16A6NNV3 312 aaPredicted RBP10.62□□□□□ -0.71
PRPF38A-203ENST00000487160 TMEM92Q6UXU6 159 aa10.62□□□□□ -0.71
PRPF38A-203ENST00000487160 PDIA6Q15084 440 aa10.61□□□□□ -0.71
PRPF38A-203ENST00000487160 RBM26Q5T8P6 1007 aaKnown RBP10.61□□□□□ -0.71
PRPF38A-203ENST00000487160 C7P10643 843 aa10.6□□□□□ -0.71
PRPF38A-203ENST00000487160 SLC24A3Q9HC58 644 aa10.59□□□□□ -0.71
PRPF38A-203ENST00000487160 ZMYND10O75800 440 aa10.58□□□□□ -0.72
PRPF38A-203ENST00000487160 POTEIP0CG38 1075 aa10.58□□□□□ -0.72
PRPF38A-203ENST00000487160 MAP3K9P80192 1104 aa10.58□□□□□ -0.72
PRPF38A-203ENST00000487160 METRNQ9UJH8 293 aa10.57□□□□□ -0.72
PRPF38A-203ENST00000487160 UPF1Q92900 1129 aaKnown RBP eCLIP10.56□□□□□ -0.72
PRPF38A-203ENST00000487160 BARGINQ6ZT62 677 aa10.54□□□□□ -0.72
PRPF38A-203ENST00000487160 GPIHBP1Q8IV16 184 aa10.54□□□□□ -0.72
PRPF38A-203ENST00000487160 BRPF1P55201 1214 aaPredicted RBP10.52□□□□□ -0.73
PRPF38A-203ENST00000487160 OXER1Q8TDS5 423 aa10.52□□□□□ -0.73
PRPF38A-203ENST00000487160 GRXCR2A6NFK2 248 aa10.51□□□□□ -0.73
PRPF38A-203ENST00000487160 C3orf67Q6ZVT6 689 aa10.5□□□□□ -0.73
PRPF38A-203ENST00000487160 TMEM132AQ24JP5 1023 aa10.49□□□□□ -0.73
PRPF38A-203ENST00000487160 SP7Q8TDD2 431 aaPredicted RBP10.49□□□□□ -0.73
PRPF38A-203ENST00000487160 TBC1D12O60347 775 aa10.47□□□□□ -0.73
PRPF38A-203ENST00000487160 NEUROD2Q15784 382 aa10.47□□□□□ -0.73
PRPF38A-203ENST00000487160 KRI1Q8N9T8 703 aaKnown RBP10.47□□□□□ -0.73
PRPF38A-203ENST00000487160 EVI5O60447 810 aa10.44□□□□□ -0.74
PRPF38A-203ENST00000487160 PTGER2P43116 358 aa10.44□□□□□ -0.74
PRPF38A-203ENST00000487160 PTCD2Q8WV60 388 aaKnown RBP10.44□□□□□ -0.74
PRPF38A-203ENST00000487160 DDX12PQ92771 950 aa10.44□□□□□ -0.74
PRPF38A-203ENST00000487160 AK7Q96M32 723 aa10.44□□□□□ -0.74
PRPF38A-203ENST00000487160 OSBPP22059 807 aa10.43□□□□□ -0.74
PRPF38A-203ENST00000487160 NUTM2FA1L443 756 aa10.42□□□□□ -0.74
PRPF38A-203ENST00000487160 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.42□□□□□ -0.74
PRPF38A-203ENST00000487160 GTF3C3Q9Y5Q9 886 aa10.42□□□□□ -0.74
PRPF38A-203ENST00000487160 GPR37O15354 613 aa10.41□□□□□ -0.74
PRPF38A-203ENST00000487160 SLC34A2O95436 690 aa10.4□□□□□ -0.74
PRPF38A-203ENST00000487160 PRIM1P49642 420 aaKnown RBP10.37□□□□□ -0.75
PRPF38A-203ENST00000487160 ANO8Q9HCE9 1232 aaPredicted RBP10.37□□□□□ -0.75
PRPF38A-203ENST00000487160 ZNF316A6NFI3 1004 aaPredicted RBP10.36□□□□□ -0.75
PRPF38A-203ENST00000487160 TRIM66O15016 1216 aa10.35□□□□□ -0.75
PRPF38A-203ENST00000487160 GPBP1L1Q9HC44 474 aaPredicted RBP10.33□□□□□ -0.76
PRPF38A-203ENST00000487160 PCDHGA4Q9Y5G9 962 aa10.33□□□□□ -0.76
PRPF38A-203ENST00000487160 MINK1Q8N4C8 1332 aaPredicted RBP10.33□□□□□ -0.76
PRPF38A-203ENST00000487160 GNPATO15228 680 aa10.32□□□□□ -0.76
PRPF38A-203ENST00000487160 FCHSD2O94868 740 aa10.32□□□□□ -0.76
PRPF38A-203ENST00000487160 PDE4DQ08499 809 aa10.32□□□□□ -0.76
PRPF38A-203ENST00000487160 HIC1Q14526 733 aa10.31□□□□□ -0.76
PRPF38A-203ENST00000487160 POTEJP0CG39 1038 aa10.3□□□□□ -0.76
PRPF38A-203ENST00000487160 FECHP22830 423 aa10.3□□□□□ -0.76
PRPF38A-203ENST00000487160 MAP2K5Q13163 448 aa10.3□□□□□ -0.76
PRPF38A-203ENST00000487160 IRF6O14896 467 aa10.29□□□□□ -0.76
PRPF38A-203ENST00000487160 PHF14O94880 888 aa10.29□□□□□ -0.76
PRPF38A-203ENST00000487160 PTGDRQ13258 359 aa10.29□□□□□ -0.76
PRPF38A-203ENST00000487160 CCDC102AQ96A19 550 aa10.28□□□□□ -0.76
PRPF38A-203ENST00000487160 KDM4CQ9H3R0 1056 aa10.28□□□□□ -0.76
PRPF38A-203ENST00000487160 POTEB2H3BUK9 544 aa10.27□□□□□ -0.77
PRPF38A-203ENST00000487160 EPAS1Q99814 870 aa10.27□□□□□ -0.77
PRPF38A-203ENST00000487160 TIMELESSQ9UNS1 1208 aa10.27□□□□□ -0.77
PRPF38A-203ENST00000487160 PCDHGA10Q9Y5H3 936 aa10.27□□□□□ -0.77
PRPF38A-203ENST00000487160 KDM4FA0A1W2PPD8 638 aa10.26□□□□□ -0.77
PRPF38A-203ENST00000487160 EN1Q05925 392 aaPredicted RBP10.26□□□□□ -0.77
PRPF38A-203ENST00000487160 RBM33Q96EV2 1170 aaKnown RBP10.26□□□□□ -0.77
PRPF38A-203ENST00000487160 CDHR5Q9HBB8 845 aa10.26□□□□□ -0.77
PRPF38A-203ENST00000487160 MAP3K7O43318 606 aa10.25□□□□□ -0.77
PRPF38A-203ENST00000487160 SLAIN1Q8ND83 568 aa10.25□□□□□ -0.77
PRPF38A-203ENST00000487160 IL27Q8NEV9 243 aa10.24□□□□□ -0.77
PRPF38A-203ENST00000487160 NPDC1Q9NQX5 325 aaPredicted RBP10.24□□□□□ -0.77
PRPF38A-203ENST00000487160 TYW1BQ6NUM6 668 aa10.23□□□□□ -0.77
PRPF38A-203ENST00000487160 TSR1Q2NL82 804 aaKnown RBP10.22□□□□□ -0.77
PRPF38A-203ENST00000487160 KHSRPQ92945 711 aaKnown RBP eCLIP10.21□□□□□ -0.77
PRPF38A-203ENST00000487160 NUDT7P0C024 238 aa10.2□□□□□ -0.78
PRPF38A-203ENST00000487160 HOXB3P14651 431 aaPredicted RBP10.2□□□□□ -0.78
PRPF38A-203ENST00000487160 AMHR2Q16671 573 aa10.2□□□□□ -0.78
PRPF38A-203ENST00000487160 DOK7Q18PE1 504 aa10.2□□□□□ -0.78
PRPF38A-203ENST00000487160 ARSIQ5FYB1 569 aa10.2□□□□□ -0.78
PRPF38A-203ENST00000487160 FBXW7Q969H0 707 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms