RNA–Protein interactions for RNA: ENST00000484298.5

ALMS1-204, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-204ENST00000484298 GZF1Q9H116 711 aaPredicted RBP11.96□□□□□ -0.49
ALMS1-204ENST00000484298 TPM1P09493 284 aa11.96□□□□□ -0.49
ALMS1-204ENST00000484298 SUPT16HQ9Y5B9 1047 aaKnown RBP11.96□□□□□ -0.49
ALMS1-204ENST00000484298 TAF7LQ5H9L4 462 aa11.96□□□□□ -0.5
ALMS1-204ENST00000484298 DDX11L8A8MPP1 907 aa11.96□□□□□ -0.5
ALMS1-204ENST00000484298 PABPN1Q86U42 306 aaKnown RBP eCLIP11.96□□□□□ -0.5
ALMS1-204ENST00000484298 KNSTRNQ9Y448 316 aa11.95□□□□□ -0.5
ALMS1-204ENST00000484298 MEX3CQ5U5Q3 659 aaKnown RBP11.95□□□□□ -0.5
ALMS1-204ENST00000484298 MIER1Q8N108 512 aa11.95□□□□□ -0.5
ALMS1-204ENST00000484298 ANO8Q9HCE9 1232 aaPredicted RBP11.94□□□□□ -0.5
ALMS1-204ENST00000484298 PODXL2Q9NZ53 605 aa11.94□□□□□ -0.5
ALMS1-204ENST00000484298 PKNOX2Q96KN3 472 aa11.94□□□□□ -0.5
ALMS1-204ENST00000484298 H0YHG0 523 aa11.93□□□□□ -0.5
ALMS1-204ENST00000484298 RUFY1Q96T51 708 aa11.93□□□□□ -0.5
ALMS1-204ENST00000484298 ARGLU1Q9NWB6 273 aaPredicted RBP11.93□□□□□ -0.5
ALMS1-204ENST00000484298 PPP1R15AO75807 674 aaPredicted RBP11.93□□□□□ -0.5
ALMS1-204ENST00000484298 HSP90B2PQ58FF3 399 aa11.93□□□□□ -0.5
ALMS1-204ENST00000484298 NEXNQ0ZGT2 675 aa11.93□□□□□ -0.5
ALMS1-204ENST00000484298 KIF3AQ9Y496 699 aa11.93□□□□□ -0.5
ALMS1-204ENST00000484298 KDM2AQ9Y2K7 1162 aa11.92□□□□□ -0.5
ALMS1-204ENST00000484298 FBXO3Q9UK99 471 aa11.92□□□□□ -0.5
ALMS1-204ENST00000484298 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.92□□□□□ -0.5
ALMS1-204ENST00000484298 INCENPQ9NQS7 918 aa11.92□□□□□ -0.5
ALMS1-204ENST00000484298 IPO7O95373 1038 aaKnown RBP11.91□□□□□ -0.5
ALMS1-204ENST00000484298 KIF16BQ96L93 1317 aa11.91□□□□□ -0.5
ALMS1-204ENST00000484298 CCAR2Q8N163 923 aaKnown RBP11.9□□□□□ -0.5
ALMS1-204ENST00000484298 TPM2P07951 284 aa11.9□□□□□ -0.5
ALMS1-204ENST00000484298 LMOD2Q6P5Q4 547 aa11.9□□□□□ -0.5
ALMS1-204ENST00000484298 DYDC1Q8WWB3 177 aa11.9□□□□□ -0.51
ALMS1-204ENST00000484298 NUDCQ9Y266 331 aa11.9□□□□□ -0.51
ALMS1-204ENST00000484298 RBM19Q9Y4C8 960 aaKnown RBP11.88□□□□□ -0.51
ALMS1-204ENST00000484298 SKOR2Q2VWA4 1001 aaPredicted RBP11.88□□□□□ -0.51
ALMS1-204ENST00000484298 ATP6V1DQ9Y5K8 247 aa11.88□□□□□ -0.51
ALMS1-204ENST00000484298 TCERG1O14776 1098 aaKnown RBP11.88□□□□□ -0.51
ALMS1-204ENST00000484298 TAF3Q5VWG9 929 aa11.88□□□□□ -0.51
ALMS1-204ENST00000484298 SPRYD3Q8NCJ5 442 aa11.88□□□□□ -0.51
ALMS1-204ENST00000484298 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.88□□□□□ -0.51
ALMS1-204ENST00000484298 FRAT1Q92837 279 aaPredicted RBP11.88□□□□□ -0.51
ALMS1-204ENST00000484298 GOLGA6L19H0YKK7 550 aa11.88□□□□□ -0.51
ALMS1-204ENST00000484298 RASSF8Q8NHQ8 419 aa11.88□□□□□ -0.51
ALMS1-204ENST00000484298 ZRSR2Q15696 482 aaKnown RBP11.87□□□□□ -0.51
ALMS1-204ENST00000484298 CAGE1Q8TC20 777 aa11.87□□□□□ -0.51
ALMS1-204ENST00000484298 GOLGA6L7A0A1B0GV03 622 aa11.86□□□□□ -0.51
ALMS1-204ENST00000484298 NPM1P06748 294 aaKnown RBP eCLIP11.86□□□□□ -0.51
ALMS1-204ENST00000484298 SLKQ9H2G2 1235 aaPredicted RBP11.85□□□□□ -0.51
ALMS1-204ENST00000484298 USP8P40818 1118 aa11.85□□□□□ -0.51
ALMS1-204ENST00000484298 CHMP4CQ96CF2 233 aa11.85□□□□□ -0.51
ALMS1-204ENST00000484298 GPATCH3Q96I76 525 aa11.85□□□□□ -0.51
ALMS1-204ENST00000484298 MYO6Q9UM54 1294 aa11.84□□□□□ -0.51
ALMS1-204ENST00000484298 IPO9Q96P70 1041 aaKnown RBP11.84□□□□□ -0.51
ALMS1-204ENST00000484298 FAM13BQ9NYF5 915 aa11.83□□□□□ -0.51
ALMS1-204ENST00000484298 TPD52L1Q16890 204 aaPredicted RBP11.83□□□□□ -0.52
ALMS1-204ENST00000484298 ANKRD20A12PQ8NF67 263 aa11.82□□□□□ -0.52
ALMS1-204ENST00000484298 CSRNP3Q8WYN3 585 aa11.82□□□□□ -0.52
ALMS1-204ENST00000484298 ST18O60284 1047 aa11.82□□□□□ -0.52
ALMS1-204ENST00000484298 CHIC2Q9UKJ5 165 aa11.82□□□□□ -0.52
ALMS1-204ENST00000484298 ERCC4Q92889 916 aaPredicted RBP11.81□□□□□ -0.52
ALMS1-204ENST00000484298 PES1O00541 588 aaKnown RBP11.81□□□□□ -0.52
ALMS1-204ENST00000484298 HSP90AB3PQ58FF7 597 aa11.81□□□□□ -0.52
ALMS1-204ENST00000484298 IPO8O15397 1037 aaKnown RBP11.81□□□□□ -0.52
ALMS1-204ENST00000484298 LEKR1Q6ZMV7 388 aa11.81□□□□□ -0.52
ALMS1-204ENST00000484298 BECN2A8MW95 431 aa11.8□□□□□ -0.52
ALMS1-204ENST00000484298 B4GALNT3Q6L9W6 998 aa11.8□□□□□ -0.52
ALMS1-204ENST00000484298 CREBRFQ8IUR6 639 aa11.8□□□□□ -0.52
ALMS1-204ENST00000484298 GSE1Q14687 1217 aa11.8□□□□□ -0.52
ALMS1-204ENST00000484298 KRI1Q8N9T8 703 aaKnown RBP11.79□□□□□ -0.52
ALMS1-204ENST00000484298 DIAPH3Q9NSV4 1193 aa11.78□□□□□ -0.52
ALMS1-204ENST00000484298 CCDC173Q0VFZ6 552 aa11.78□□□□□ -0.52
ALMS1-204ENST00000484298 HOMER1Q86YM7 354 aa11.78□□□□□ -0.52
ALMS1-204ENST00000484298 DEF6Q9H4E7 631 aa11.78□□□□□ -0.52
ALMS1-204ENST00000484298 FAM43AQ8N2R8 423 aa11.77□□□□□ -0.52
ALMS1-204ENST00000484298 HOOK1Q9UJC3 728 aaKnown RBP11.77□□□□□ -0.53
ALMS1-204ENST00000484298 ZNF592Q92610 1267 aa11.77□□□□□ -0.53
ALMS1-204ENST00000484298 CHMP4AQ9BY43 222 aa11.77□□□□□ -0.53
ALMS1-204ENST00000484298 RWDD1Q9H446 243 aaPredicted RBP11.77□□□□□ -0.53
ALMS1-204ENST00000484298 KIAA0754O94854 1291 aa11.76□□□□□ -0.53
ALMS1-204ENST00000484298 HDAC5Q9UQL6 1122 aa11.76□□□□□ -0.53
ALMS1-204ENST00000484298 PLCD4Q9BRC7 762 aa11.75□□□□□ -0.53
ALMS1-204ENST00000484298 HIRIP3Q9BW71 556 aaPredicted RBP11.75□□□□□ -0.53
ALMS1-204ENST00000484298 MNS1Q8NEH6 495 aa11.75□□□□□ -0.53
ALMS1-204ENST00000484298 TSPYL1Q9H0U9 437 aa11.75□□□□□ -0.53
ALMS1-204ENST00000484298 SF3A1Q15459 793 aaKnown RBP11.74□□□□□ -0.53
ALMS1-204ENST00000484298 TSPY4P0CV99 314 aa11.74□□□□□ -0.53
ALMS1-204ENST00000484298 TSPY10P0CW01 314 aa11.74□□□□□ -0.53
ALMS1-204ENST00000484298 NEUROD2Q15784 382 aa11.73□□□□□ -0.53
ALMS1-204ENST00000484298 PMFBP1Q8TBY8 1022 aa11.72□□□□□ -0.53
ALMS1-204ENST00000484298 TIMELESSQ9UNS1 1208 aa11.71□□□□□ -0.53
ALMS1-204ENST00000484298 HMGN5P82970 282 aaKnown RBP11.71□□□□□ -0.53
ALMS1-204ENST00000484298 GOLGA6L10A6NI86 522 aa11.71□□□□□ -0.54
ALMS1-204ENST00000484298 H3BQV1 296 aa11.71□□□□□ -0.54
ALMS1-204ENST00000484298 IFFO2Q5TF58 517 aa11.71□□□□□ -0.54
ALMS1-204ENST00000484298 CCP110O43303 1012 aa11.7□□□□□ -0.54
ALMS1-204ENST00000484298 ANKRD18AQ8IVF6 992 aa11.7□□□□□ -0.54
ALMS1-204ENST00000484298 DDX49Q9Y6V7 483 aaKnown RBP11.7□□□□□ -0.54
ALMS1-204ENST00000484298 MTUS2Q5JR59 1369 aa11.7□□□□□ -0.54
ALMS1-204ENST00000484298 EZRP15311 586 aaKnown RBP11.7□□□□□ -0.54
ALMS1-204ENST00000484298 ODF2Q5BJF6 829 aa11.69□□□□□ -0.54
ALMS1-204ENST00000484298 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.69□□□□□ -0.54
ALMS1-204ENST00000484298 SOX12O15370 315 aa11.68□□□□□ -0.54
ALMS1-204ENST00000484298 CT47A1Q5JQC4 288 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms