RNA–Protein interactions for RNA: ENST00000445275.6

TOM1L1-202, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-202ENST00000445275 CFDP1Q9UEE9 299 aaPredicted RBP28.57■■■□□ 2.16
TOM1L1-202ENST00000445275 KDM6BO15054 1643 aa28.52■■■□□ 2.16
TOM1L1-202ENST00000445275 ROCK1Q13464 1354 aa28.48■■■□□ 2.15
TOM1L1-202ENST00000445275 ZNF316A6NFI3 1004 aaPredicted RBP28.47■■■□□ 2.15
TOM1L1-202ENST00000445275 UHRF1BP1LA0JNW5 1464 aa28.47■■■□□ 2.15
TOM1L1-202ENST00000445275 ZNF777Q9ULD5 760 aaPredicted RBP28.46■■■□□ 2.15
TOM1L1-202ENST00000445275 CROCC2H7BZ55 1655 aa28.44■■■□□ 2.14
TOM1L1-202ENST00000445275 ZCCHC11Q5TAX3 1644 aaKnown RBP28.44■■■□□ 2.14
TOM1L1-202ENST00000445275 SIN3AQ96ST3 1273 aa28.43■■■□□ 2.14
TOM1L1-202ENST00000445275 CDC42BPBQ9Y5S2 1711 aa28.4■■■□□ 2.14
TOM1L1-202ENST00000445275 ADGBQ8N7X0 1667 aa28.4■■■□□ 2.14
TOM1L1-202ENST00000445275 PREX2Q70Z35 1606 aa28.4■■■□□ 2.14
TOM1L1-202ENST00000445275 KDM5BQ9UGL1 1544 aa28.4■■■□□ 2.14
TOM1L1-202ENST00000445275 TTC37Q6PGP7 1564 aa28.38■■■□□ 2.13
TOM1L1-202ENST00000445275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.37■■■□□ 2.13
TOM1L1-202ENST00000445275 NEUROD1Q13562 356 aa28.34■■■□□ 2.13
TOM1L1-202ENST00000445275 ADGRL2O95490 1459 aa28.34■■■□□ 2.13
TOM1L1-202ENST00000445275 DENND4BO75064 1496 aaPredicted RBP28.33■■■□□ 2.13
TOM1L1-202ENST00000445275 OSCARQ8IYS5 282 aa28.33■■■□□ 2.12
TOM1L1-202ENST00000445275 SAMD9LQ8IVG5 1584 aa28.32■■■□□ 2.12
TOM1L1-202ENST00000445275 NCOA1Q15788 1441 aa28.32■■■□□ 2.12
TOM1L1-202ENST00000445275 DIEXFQ68CQ4 756 aaKnown RBP28.3■■■□□ 2.12
TOM1L1-202ENST00000445275 TRIM52Q96A61 297 aa28.29■■■□□ 2.12
TOM1L1-202ENST00000445275 ARHGEF5Q12774 1597 aa28.28■■■□□ 2.12
TOM1L1-202ENST00000445275 SHANK2Q9UPX8 1470 aa28.28■■■□□ 2.12
TOM1L1-202ENST00000445275 MYO5CQ9NQX4 1742 aa28.28■■■□□ 2.12
TOM1L1-202ENST00000445275 MBD5Q9P267 1494 aa28.26■■■□□ 2.12
TOM1L1-202ENST00000445275 KCNH8Q96L42 1107 aa28.25■■■□□ 2.11
TOM1L1-202ENST00000445275 HNRNPMP52272 730 aaKnown RBP eCLIP28.24■■■□□ 2.11
TOM1L1-202ENST00000445275 TIMELESSQ9UNS1 1208 aa28.24■■■□□ 2.11
TOM1L1-202ENST00000445275 C9orf84Q5VXU9 1444 aa28.23■■■□□ 2.11
TOM1L1-202ENST00000445275 ARHGAP5Q13017 1502 aa28.23■■■□□ 2.11
TOM1L1-202ENST00000445275 ANKRD30AQ9BXX3 1397 aa28.23■■■□□ 2.11
TOM1L1-202ENST00000445275 MPHOSPH9Q99550 1183 aa28.22■■■□□ 2.11
TOM1L1-202ENST00000445275 ACIN1Q9UKV3 1341 aaKnown RBP28.19■■■□□ 2.1
TOM1L1-202ENST00000445275 CCDC141Q6ZP82 1450 aa28.17■■■□□ 2.1
TOM1L1-202ENST00000445275 SYCP2Q9BX26 1530 aa28.17■■■□□ 2.1
TOM1L1-202ENST00000445275 PLCH2O75038 1416 aa28.14■■■□□ 2.1
TOM1L1-202ENST00000445275 TSPY4P0CV99 314 aa28.14■■■□□ 2.1
TOM1L1-202ENST00000445275 TSPY10P0CW01 314 aa28.14■■■□□ 2.1
TOM1L1-202ENST00000445275 PZPP20742 1482 aa28.12■■■□□ 2.09
TOM1L1-202ENST00000445275 PPP1R15AO75807 674 aaPredicted RBP28.12■■■□□ 2.09
TOM1L1-202ENST00000445275 ANKRD50Q9ULJ7 1429 aa28.12■■■□□ 2.09
TOM1L1-202ENST00000445275 WDR7Q9Y4E6 1490 aa28.12■■■□□ 2.09
TOM1L1-202ENST00000445275 TONSLQ96HA7 1378 aa28.11■■■□□ 2.09
TOM1L1-202ENST00000445275 RSPH4AQ5TD94 716 aa28.1■■■□□ 2.09
TOM1L1-202ENST00000445275 KIAA1107Q9UPP5 1409 aa28.09■■■□□ 2.09
TOM1L1-202ENST00000445275 PLEKHH2Q8IVE3 1493 aa28.09■■■□□ 2.09
TOM1L1-202ENST00000445275 FOXD1Q16676 465 aa28.08■■■□□ 2.09
TOM1L1-202ENST00000445275 MAST1Q9Y2H9 1570 aa28.08■■■□□ 2.09
TOM1L1-202ENST00000445275 ARHGEF12Q9NZN5 1544 aa28.07■■■□□ 2.08
TOM1L1-202ENST00000445275 KIF15Q9NS87 1388 aa28.06■■■□□ 2.08
TOM1L1-202ENST00000445275 SLC4A1APQ9BWU0 796 aaKnown RBP28.04■■■□□ 2.08
TOM1L1-202ENST00000445275 ANKRD30BQ9BXX2 1392 aa28.04■■■□□ 2.08
TOM1L1-202ENST00000445275 EFCAB2Q5VUJ9 269 aa28.03■■■□□ 2.08
TOM1L1-202ENST00000445275 ABCC1P33527 1531 aa28.02■■■□□ 2.08
TOM1L1-202ENST00000445275 ARAP3Q8WWN8 1544 aa28.02■■■□□ 2.08
TOM1L1-202ENST00000445275 ASXL2Q76L83 1435 aa28.02■■■□□ 2.08
TOM1L1-202ENST00000445275 ABCA9Q8IUA7 1624 aa28.01■■■□□ 2.07
TOM1L1-202ENST00000445275 KDM5DQ9BY66 1539 aa27.96■■■□□ 2.07
TOM1L1-202ENST00000445275 PLXNC1O60486 1568 aa27.96■■■□□ 2.07
TOM1L1-202ENST00000445275 RPRD2Q5VT52 1461 aaKnown RBP27.94■■■□□ 2.06
TOM1L1-202ENST00000445275 TRAPPC8Q9Y2L5 1435 aa27.93■■■□□ 2.06
TOM1L1-202ENST00000445275 NUP155O75694 1391 aa27.92■■■□□ 2.06
TOM1L1-202ENST00000445275 NPM1P06748 294 aaKnown RBP eCLIP27.89■■■□□ 2.06
TOM1L1-202ENST00000445275 PKD2Q13563 968 aa27.89■■■□□ 2.06
TOM1L1-202ENST00000445275 FANCAO15360 1455 aa27.87■■■□□ 2.05
TOM1L1-202ENST00000445275 MIER1Q8N108 512 aa27.85■■■□□ 2.05
TOM1L1-202ENST00000445275 L3MBTL2Q969R5 705 aa27.85■■■□□ 2.05
TOM1L1-202ENST00000445275 UNC13BO14795 1591 aa27.85■■■□□ 2.05
TOM1L1-202ENST00000445275 TEX14Q8IWB6 1497 aa27.84■■■□□ 2.05
TOM1L1-202ENST00000445275 DUOX2Q9NRD8 1548 aa27.84■■■□□ 2.05
TOM1L1-202ENST00000445275 FAM135AQ9P2D6 1515 aa27.8■■■□□ 2.04
TOM1L1-202ENST00000445275 AFAP1Q8N556 730 aa27.79■■■□□ 2.04
TOM1L1-202ENST00000445275 ZFYVE16Q7Z3T8 1539 aa27.79■■■□□ 2.04
TOM1L1-202ENST00000445275 RTEL1-TNFRSF6BF6WH68 1400 aa27.77■■■□□ 2.04
TOM1L1-202ENST00000445275 ERBINQ96RT1 1412 aa27.77■■■□□ 2.04
TOM1L1-202ENST00000445275 SPAG9O60271 1321 aaKnown RBP27.76■■■□□ 2.04
TOM1L1-202ENST00000445275 ADGRL1O94910 1474 aa27.76■■■□□ 2.03
TOM1L1-202ENST00000445275 HIRIP3Q9BW71 556 aaPredicted RBP27.75■■■□□ 2.03
TOM1L1-202ENST00000445275 RIMBP3CA6NJZ7 1639 aa27.74■■■□□ 2.03
TOM1L1-202ENST00000445275 RIMBP3BA6NNM3 1639 aa27.74■■■□□ 2.03
TOM1L1-202ENST00000445275 RIMBP3Q9UFD9 1639 aa27.74■■■□□ 2.03
TOM1L1-202ENST00000445275 INO80Q9ULG1 1556 aaPredicted RBP27.74■■■□□ 2.03
TOM1L1-202ENST00000445275 SCAPERQ9BY12 1400 aa27.73■■■□□ 2.03
TOM1L1-202ENST00000445275 IQGAP3Q86VI3 1631 aa27.73■■■□□ 2.03
TOM1L1-202ENST00000445275 MAGI2Q86UL8 1455 aa27.72■■■□□ 2.03
TOM1L1-202ENST00000445275 ATP7AQ04656 1500 aa27.7■■■□□ 2.02
TOM1L1-202ENST00000445275 CD109Q6YHK3 1445 aa27.69■■■□□ 2.02
TOM1L1-202ENST00000445275 NBPF8Q3BBV2 869 aa27.68■■■□□ 2.02
TOM1L1-202ENST00000445275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.68■■■□□ 2.024e-8■■□□□ 13.9
TOM1L1-202ENST00000445275 CYB5RLQ6IPT4 315 aa27.66■■■□□ 2.02
TOM1L1-202ENST00000445275 CFAP74Q9C0B2 1584 aa27.65■■■□□ 2.02
TOM1L1-202ENST00000445275 PLA2R1Q13018 1463 aa27.6■■■□□ 2.01
TOM1L1-202ENST00000445275 KIDINS220Q9ULH0 1771 aa27.59■■■□□ 2.01
TOM1L1-202ENST00000445275 DDX10Q13206 875 aaKnown RBP27.59■■■□□ 2.01
TOM1L1-202ENST00000445275 DEPDC5O75140 1603 aa27.58■■■□□ 2.01
TOM1L1-202ENST00000445275 HSPA5P11021 654 aaKnown RBP27.58■■■□□ 2.01
TOM1L1-202ENST00000445275 ZNF518AQ6AHZ1 1483 aa27.57■■■□□ 2
TOM1L1-202ENST00000445275 POGZQ7Z3K3 1410 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms