RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 POLA2Q14181 598 aa5.71□□□□□ -1.49
UBR3-206ENST00000444475 TEX2Q8IWB9 1127 aa5.71□□□□□ -1.49
UBR3-206ENST00000444475 FAM117AQ9C073 453 aa5.71□□□□□ -1.5
UBR3-206ENST00000444475 ZNF326Q5BKZ1 582 aaKnown RBP5.7□□□□□ -1.5
UBR3-206ENST00000444475 LOC102724159A0A0B4J2E5 919 aa5.69□□□□□ -1.5
UBR3-206ENST00000444475 PWP2Q15269 919 aaKnown RBP5.69□□□□□ -1.5
UBR3-206ENST00000444475 TRIM41Q8WV44 630 aa5.69□□□□□ -1.5
UBR3-206ENST00000444475 ZNF219Q9P2Y4 722 aaPredicted RBP5.69□□□□□ -1.5
UBR3-206ENST00000444475 RIPOR2Q9Y4F9 1068 aa5.68□□□□□ -1.5
UBR3-206ENST00000444475 TRIM66O15016 1216 aa5.68□□□□□ -1.5
UBR3-206ENST00000444475 SMARCA5O60264 1052 aaPredicted RBP5.68□□□□□ -1.5
UBR3-206ENST00000444475 PDE4DQ08499 809 aa5.68□□□□□ -1.5
UBR3-206ENST00000444475 KCNA1Q09470 495 aa5.68□□□□□ -1.5
UBR3-206ENST00000444475 PLSCR2Q9NRY7 297 aa5.68□□□□□ -1.5
UBR3-206ENST00000444475 ARID4BQ4LE39 1312 aaPredicted RBP5.68□□□□□ -1.5
UBR3-206ENST00000444475 MCM6Q14566 821 aa5.68□□□□□ -1.5
UBR3-206ENST00000444475 SIRT1Q96EB6 747 aa5.68□□□□□ -1.5
UBR3-206ENST00000444475 RBM47A0AV96 593 aaKnown RBP5.67□□□□□ -1.5
UBR3-206ENST00000444475 PLEKHD1A6NEE1 506 aa5.67□□□□□ -1.5
UBR3-206ENST00000444475 PROSER2Q86WR7 435 aaPredicted RBP5.67□□□□□ -1.5
UBR3-206ENST00000444475 KIAA1522Q9P206 1035 aaPredicted RBP5.67□□□□□ -1.5
UBR3-206ENST00000444475 ZNF777Q9ULD5 760 aaPredicted RBP5.67□□□□□ -1.5
UBR3-206ENST00000444475 PATL2C9JE40 543 aaKnown RBP5.67□□□□□ -1.5
UBR3-206ENST00000444475 MAFGO15525 162 aa5.66□□□□□ -1.5
UBR3-206ENST00000444475 CCDC136Q96JN2 1154 aa5.66□□□□□ -1.5
UBR3-206ENST00000444475 GOPCQ9HD26 462 aa5.66□□□□□ -1.5
UBR3-206ENST00000444475 ANKRD13AQ8IZ07 590 aa5.65□□□□□ -1.5
UBR3-206ENST00000444475 EXOC8Q8IYI6 725 aa5.64□□□□□ -1.51
UBR3-206ENST00000444475 BRD1O95696 1058 aa5.64□□□□□ -1.51
UBR3-206ENST00000444475 AAMPQ13685 434 aa5.63□□□□□ -1.51
UBR3-206ENST00000444475 SETQ01105 290 aaPredicted RBP5.63□□□□□ -1.51
UBR3-206ENST00000444475 TXNDC2Q86VQ3 553 aa5.62□□□□□ -1.51
UBR3-206ENST00000444475 SND1Q7KZF4 910 aaKnown RBP eCLIP5.62□□□□□ -1.51
UBR3-206ENST00000444475 CCDC97Q96F63 343 aaPredicted RBP5.62□□□□□ -1.51
UBR3-206ENST00000444475 C8orf37Q96NL8 207 aa5.62□□□□□ -1.51
UBR3-206ENST00000444475 CIZ1Q9ULV3 898 aaPredicted RBP5.62□□□□□ -1.51
UBR3-206ENST00000444475 PPP1R15AO75807 674 aaPredicted RBP5.61□□□□□ -1.51
UBR3-206ENST00000444475 POM121Q96HA1 1249 aa5.61□□□□□ -1.51
UBR3-206ENST00000444475 SUGT1Q9Y2Z0 365 aa5.61□□□□□ -1.51
UBR3-206ENST00000444475 CHRM1P11229 460 aaPredicted RBP5.61□□□□□ -1.51
UBR3-206ENST00000444475 SLC52A1Q9NWF4 448 aa5.61□□□□□ -1.51
UBR3-206ENST00000444475 RIOK3O14730 519 aaKnown RBP5.6□□□□□ -1.51
UBR3-206ENST00000444475 SGSM3Q96HU1 749 aa5.6□□□□□ -1.51
UBR3-206ENST00000444475 DRC1Q96MC2 740 aa5.6□□□□□ -1.51
UBR3-206ENST00000444475 RYDENQ9NUL5 291 aaKnown RBP5.6□□□□□ -1.51
UBR3-206ENST00000444475 NAP1L5Q96NT1 182 aaPredicted RBP5.59□□□□□ -1.51
UBR3-206ENST00000444475 MARCH6O60337 910 aa5.59□□□□□ -1.51
UBR3-206ENST00000444475 SGIP1Q9BQI5 828 aa5.59□□□□□ -1.51
UBR3-206ENST00000444475 HIRIP3Q9BW71 556 aaPredicted RBP5.59□□□□□ -1.52
UBR3-206ENST00000444475 PPME1Q9Y570 386 aa5.59□□□□□ -1.52
UBR3-206ENST00000444475 ZNF526Q8TF50 670 aaPredicted RBP5.58□□□□□ -1.52
UBR3-206ENST00000444475 DDRGK1Q96HY6 314 aa5.58□□□□□ -1.52
UBR3-206ENST00000444475 NCLP19338 710 aaKnown RBP5.58□□□□□ -1.52
UBR3-206ENST00000444475 PRDM10Q9NQV6 1147 aa5.58□□□□□ -1.52
UBR3-206ENST00000444475 GRIPAP1Q4V328 841 aa5.58□□□□□ -1.52
UBR3-206ENST00000444475 A0A0U1RQG5 324 aaPredicted RBP5.57□□□□□ -1.52
UBR3-206ENST00000444475 SREK1Q8WXA9 508 aaKnown RBP5.57□□□□□ -1.52
UBR3-206ENST00000444475 STAG3Q9UJ98 1225 aa5.57□□□□□ -1.52
UBR3-206ENST00000444475 STK25O00506 426 aa5.56□□□□□ -1.52
UBR3-206ENST00000444475 HSP90AB4PQ58FF6 505 aa5.56□□□□□ -1.52
UBR3-206ENST00000444475 ANAPC15P60006 121 aa5.56□□□□□ -1.52
UBR3-206ENST00000444475 NOL8Q76FK4 1167 aaKnown RBP5.56□□□□□ -1.52
UBR3-206ENST00000444475 PLCD4Q9BRC7 762 aa5.56□□□□□ -1.52
UBR3-206ENST00000444475 MRRFQ96E11 262 aaKnown RBP5.55□□□□□ -1.52
UBR3-206ENST00000444475 ZNF662Q6ZS27 426 aa5.55□□□□□ -1.52
UBR3-206ENST00000444475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.55□□□□□ -1.52
UBR3-206ENST00000444475 TCF3P15923 654 aa5.55□□□□□ -1.52
UBR3-206ENST00000444475 ZEB1P37275 1124 aaPredicted RBP5.55□□□□□ -1.52
UBR3-206ENST00000444475 HNRNPUL2Q1KMD3 747 aaKnown RBP5.55□□□□□ -1.52
UBR3-206ENST00000444475 USTQ9Y2C2 406 aa5.55□□□□□ -1.52
UBR3-206ENST00000444475 GIMAP6Q6P9H5 292 aa5.54□□□□□ -1.52
UBR3-206ENST00000444475 MCCD1P59942 119 aaPredicted RBP5.54□□□□□ -1.52
UBR3-206ENST00000444475 E2F4Q16254 413 aa5.54□□□□□ -1.52
UBR3-206ENST00000444475 ANKRD62A6NC57 917 aa5.54□□□□□ -1.52
UBR3-206ENST00000444475 NME8Q8N427 588 aa5.54□□□□□ -1.52
UBR3-206ENST00000444475 TPD52L2O43399 206 aaKnown RBP5.53□□□□□ -1.52
UBR3-206ENST00000444475 SRPK2P78362 688 aaKnown RBP5.53□□□□□ -1.52
UBR3-206ENST00000444475 TMTC2Q8N394 836 aa5.53□□□□□ -1.52
UBR3-206ENST00000444475 GPR37O15354 613 aa5.53□□□□□ -1.52
UBR3-206ENST00000444475 TBC1D12O60347 775 aa5.53□□□□□ -1.52
UBR3-206ENST00000444475 DNAJC14Q6Y2X3 702 aaPredicted RBP5.53□□□□□ -1.52
UBR3-206ENST00000444475 IVNS1ABPQ9Y6Y0 642 aa5.53□□□□□ -1.52
UBR3-206ENST00000444475 NOM1Q5C9Z4 860 aaKnown RBP5.53□□□□□ -1.52
UBR3-206ENST00000444475 DNAJC2Q99543 621 aaKnown RBP5.53□□□□□ -1.52
UBR3-206ENST00000444475 SMYD5Q6GMV2 418 aa5.52□□□□□ -1.53
UBR3-206ENST00000444475 VGFO15240 615 aaPredicted RBP5.52□□□□□ -1.53
UBR3-206ENST00000444475 SKIV2LQ15477 1246 aaKnown RBP5.52□□□□□ -1.53
UBR3-206ENST00000444475 RBM26Q5T8P6 1007 aaKnown RBP5.52□□□□□ -1.53
UBR3-206ENST00000444475 CNPY4Q8N129 248 aa5.52□□□□□ -1.53
UBR3-206ENST00000444475 MICAL1Q8TDZ2 1067 aa5.52□□□□□ -1.53
UBR3-206ENST00000444475 UBXN4Q92575 508 aa5.52□□□□□ -1.53
UBR3-206ENST00000444475 MYH16Q9H6N6 1097 aa5.52□□□□□ -1.53
UBR3-206ENST00000444475 LAS1LQ9Y4W2 734 aaKnown RBP5.52□□□□□ -1.53
UBR3-206ENST00000444475 CENPBP07199 599 aaPredicted RBP5.52□□□□□ -1.53
UBR3-206ENST00000444475 AMHR2Q16671 573 aa5.52□□□□□ -1.53
UBR3-206ENST00000444475 SPTY2D1Q68D10 685 aaPredicted RBP5.52□□□□□ -1.53
UBR3-206ENST00000444475 PLCD3Q8N3E9 789 aa5.52□□□□□ -1.53
UBR3-206ENST00000444475 COG6Q9Y2V7 657 aa5.51□□□□□ -1.53
UBR3-206ENST00000444475 TSR1Q2NL82 804 aaKnown RBP5.51□□□□□ -1.53
UBR3-206ENST00000444475 FAM43BQ6ZT52 329 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms