RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 SENP3-EIF4A1A0A087X0R7 540 aa15.68■□□□□ 0.1
TRAPPC9-202ENST00000438773 ZNF608Q9ULD9 1512 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC9-202ENST00000438773 TIAM1Q13009 1591 aa15.67■□□□□ 0.1
TRAPPC9-202ENST00000438773 HSPA5P11021 654 aaKnown RBP15.66■□□□□ 0.1
TRAPPC9-202ENST00000438773 SALL2Q9Y467 1007 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC9-202ENST00000438773 KIAA0586Q9BVV6 1533 aa15.65■□□□□ 0.1
TRAPPC9-202ENST00000438773 PRG4Q92954 1404 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC9-202ENST00000438773 CUL7Q14999 1698 aa15.65■□□□□ 0.1
TRAPPC9-202ENST00000438773 GGT6Q6P531 493 aa15.65■□□□□ 0.1
TRAPPC9-202ENST00000438773 SPAG9O60271 1321 aaKnown RBP15.64■□□□□ 0.09
TRAPPC9-202ENST00000438773 KANK1Q14678 1352 aa15.63■□□□□ 0.09
TRAPPC9-202ENST00000438773 MAPKBP1O60336 1514 aa15.62■□□□□ 0.09
TRAPPC9-202ENST00000438773 KIF3BO15066 747 aa15.61■□□□□ 0.09
TRAPPC9-202ENST00000438773 NPM2Q86SE8 214 aaKnown RBP15.6■□□□□ 0.09
TRAPPC9-202ENST00000438773 IQGAP2Q13576 1575 aa15.6■□□□□ 0.09
TRAPPC9-202ENST00000438773 WDR97A6NE52 1622 aa15.6■□□□□ 0.09
TRAPPC9-202ENST00000438773 NBR1Q14596 966 aa15.59■□□□□ 0.09
TRAPPC9-202ENST00000438773 PCF11O94913 1555 aaKnown RBP15.58■□□□□ 0.08
TRAPPC9-202ENST00000438773 GRIN2AQ12879 1464 aa15.57■□□□□ 0.08
TRAPPC9-202ENST00000438773 RBM19Q9Y4C8 960 aaKnown RBP15.57■□□□□ 0.08
TRAPPC9-202ENST00000438773 SYNJ2O15056 1496 aa15.56■□□□□ 0.08
TRAPPC9-202ENST00000438773 UACAQ9BZF9 1416 aa15.56■□□□□ 0.08
TRAPPC9-202ENST00000438773 EPRSP07814 1512 aaKnown RBP15.55■□□□□ 0.08
TRAPPC9-202ENST00000438773 EHBP1L1Q8N3D4 1523 aa15.55■□□□□ 0.08
TRAPPC9-202ENST00000438773 CDK13Q14004 1512 aaKnown RBP15.54■□□□□ 0.08
TRAPPC9-202ENST00000438773 BCL11AQ9H165 835 aa15.54■□□□□ 0.08
TRAPPC9-202ENST00000438773 TROQ12816 1431 aaPredicted RBP15.54■□□□□ 0.08
TRAPPC9-202ENST00000438773 NEFMP07197 916 aa15.54■□□□□ 0.08
TRAPPC9-202ENST00000438773 MLECQ14165 292 aa15.54■□□□□ 0.08
TRAPPC9-202ENST00000438773 CDCA8Q53HL2 280 aa15.54■□□□□ 0.08
TRAPPC9-202ENST00000438773 MAGI1Q96QZ7 1491 aaPredicted RBP15.54■□□□□ 0.08
TRAPPC9-202ENST00000438773 WDR43Q15061 677 aaKnown RBP eCLIP15.52■□□□□ 0.08
TRAPPC9-202ENST00000438773 HECW1Q76N89 1606 aa15.52■□□□□ 0.07
TRAPPC9-202ENST00000438773 KNSTRNQ9Y448 316 aa15.51■□□□□ 0.07
TRAPPC9-202ENST00000438773 MIA2Q96PC5 1412 aa15.51■□□□□ 0.07
TRAPPC9-202ENST00000438773 KIF15Q9NS87 1388 aa15.51■□□□□ 0.07
TRAPPC9-202ENST00000438773 MAP3K1Q13233 1512 aa15.5■□□□□ 0.07
TRAPPC9-202ENST00000438773 PLB1Q6P1J6 1458 aa15.49■□□□□ 0.07
TRAPPC9-202ENST00000438773 TMF1P82094 1093 aa15.48■□□□□ 0.07
TRAPPC9-202ENST00000438773 ANKRD50Q9ULJ7 1429 aa15.48■□□□□ 0.07
TRAPPC9-202ENST00000438773 CANXP27824 592 aaKnown RBP15.48■□□□□ 0.07
TRAPPC9-202ENST00000438773 AEBP2Q6ZN18 517 aaPredicted RBP15.48■□□□□ 0.07
TRAPPC9-202ENST00000438773 ROCK2O75116 1388 aaKnown RBP15.48■□□□□ 0.07
TRAPPC9-202ENST00000438773 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.47■□□□□ 0.072e-6■■■■■ 42.3
TRAPPC9-202ENST00000438773 HFM1A2PYH4 1435 aa15.47■□□□□ 0.07
TRAPPC9-202ENST00000438773 CCER2I3L3R5 266 aa15.46■□□□□ 0.07
TRAPPC9-202ENST00000438773 KIF21AQ7Z4S6 1674 aa15.45■□□□□ 0.06
TRAPPC9-202ENST00000438773 AFAP1Q8N556 730 aa15.45■□□□□ 0.06
TRAPPC9-202ENST00000438773 CCDC144AA2RUR9 1427 aa15.45■□□□□ 0.06
TRAPPC9-202ENST00000438773 SUPT6HQ7KZ85 1726 aaKnown RBP15.44■□□□□ 0.06
TRAPPC9-202ENST00000438773 CC2D1BQ5T0F9 858 aaKnown RBP15.44■□□□□ 0.06
TRAPPC9-202ENST00000438773 WASHC2CQ9Y4E1 1318 aa15.44■□□□□ 0.06
TRAPPC9-202ENST00000438773 FAM69CQ0P6D2 419 aa15.44■□□□□ 0.06
TRAPPC9-202ENST00000438773 EIF5BO60841 1220 aaKnown RBP15.43■□□□□ 0.06
TRAPPC9-202ENST00000438773 MSH5O43196 834 aa15.42■□□□□ 0.06
TRAPPC9-202ENST00000438773 POGKQ9P215 609 aa15.41■□□□□ 0.06
TRAPPC9-202ENST00000438773 NAIPQ13075 1403 aa15.41■□□□□ 0.06
TRAPPC9-202ENST00000438773 ARHGAP5Q13017 1502 aa15.41■□□□□ 0.06
TRAPPC9-202ENST00000438773 ST20-MTHFSA0A0A6YYL1 179 aa15.4■□□□□ 0.06
TRAPPC9-202ENST00000438773 C14orf37Q86TY3 774 aa15.4■□□□□ 0.06
TRAPPC9-202ENST00000438773 DAPK1P53355 1430 aa15.39■□□□□ 0.05
TRAPPC9-202ENST00000438773 SLC24A1O60721 1099 aa15.39■□□□□ 0.05
TRAPPC9-202ENST00000438773 SAFB2Q14151 953 aaKnown RBP eCLIP15.38■□□□□ 0.052e-7■■■■□ 23
TRAPPC9-202ENST00000438773 C9orf84Q5VXU9 1444 aa15.37■□□□□ 0.05
TRAPPC9-202ENST00000438773 STK26Q9P289 416 aa15.35■□□□□ 0.05
TRAPPC9-202ENST00000438773 TNNT2P45379 298 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC9-202ENST00000438773 ARHGEF11O15085 1522 aa15.35■□□□□ 0.05
TRAPPC9-202ENST00000438773 ANP32AP39687 249 aaKnown RBP15.34■□□□□ 0.05
TRAPPC9-202ENST00000438773 CCDC136Q96JN2 1154 aa15.34■□□□□ 0.05
TRAPPC9-202ENST00000438773 NUTM2DQ5VT03 806 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC9-202ENST00000438773 USP47Q96K76 1375 aa15.33■□□□□ 0.04
TRAPPC9-202ENST00000438773 ADAMTS12P58397 1594 aa15.32■□□□□ 0.04
TRAPPC9-202ENST00000438773 PTPN23Q9H3S7 1636 aa15.31■□□□□ 0.04
TRAPPC9-202ENST00000438773 CTTNBP2Q8WZ74 1663 aa15.31■□□□□ 0.04
TRAPPC9-202ENST00000438773 SRPK2P78362 688 aaKnown RBP15.31■□□□□ 0.04
TRAPPC9-202ENST00000438773 CFAP53Q96M91 514 aa15.31■□□□□ 0.04
TRAPPC9-202ENST00000438773 THOC2Q8NI27 1593 aaKnown RBP15.3■□□□□ 0.04
TRAPPC9-202ENST00000438773 ABCC5O15440 1437 aa15.3■□□□□ 0.04
TRAPPC9-202ENST00000438773 WDR62O43379 1518 aa15.3■□□□□ 0.04
TRAPPC9-202ENST00000438773 ARXQ96QS3 562 aa15.3■□□□□ 0.04
TRAPPC9-202ENST00000438773 ROCK1Q13464 1354 aa15.3■□□□□ 0.04
TRAPPC9-202ENST00000438773 RTN4Q9NQC3 1192 aaKnown RBP15.29■□□□□ 0.04
TRAPPC9-202ENST00000438773 PPM1GO15355 546 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC9-202ENST00000438773 CCDC184Q52MB2 194 aa15.29■□□□□ 0.04
TRAPPC9-202ENST00000438773 KTN1Q86UP2 1357 aaKnown RBP15.28■□□□□ 0.04
TRAPPC9-202ENST00000438773 ABCA5Q8WWZ7 1642 aa15.28■□□□□ 0.04
TRAPPC9-202ENST00000438773 HDGFP51858 240 aaKnown RBP15.27■□□□□ 0.04
TRAPPC9-202ENST00000438773 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC9-202ENST00000438773 UGGT2Q9NYU1 1516 aa15.27■□□□□ 0.03
TRAPPC9-202ENST00000438773 NUP153P49790 1475 aaKnown RBP15.27■□□□□ 0.03
TRAPPC9-202ENST00000438773 CAMSAP2Q08AD1 1489 aa15.27■□□□□ 0.03
TRAPPC9-202ENST00000438773 EIF4G3O43432 1585 aaKnown RBP15.27■□□□□ 0.03
TRAPPC9-202ENST00000438773 NEUROD2Q15784 382 aa15.26■□□□□ 0.03
TRAPPC9-202ENST00000438773 NBPF8Q3BBV2 869 aa15.26■□□□□ 0.03
TRAPPC9-202ENST00000438773 KIAA1107Q9UPP5 1409 aa15.26■□□□□ 0.03
TRAPPC9-202ENST00000438773 TRAK1Q9UPV9 953 aa15.26■□□□□ 0.03
TRAPPC9-202ENST00000438773 PLEKHH2Q8IVE3 1493 aa15.26■□□□□ 0.03
TRAPPC9-202ENST00000438773 SCAPERQ9BY12 1400 aa15.26■□□□□ 0.03
TRAPPC9-202ENST00000438773 PTPRKQ15262 1439 aa15.25■□□□□ 0.03
TRAPPC9-202ENST00000438773 RALBP1Q15311 655 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms