RNA–Protein interactions for RNA: ENST00000414479.1

SMC4P1-201, Transcript of structural maintenance of chromosomes 4 pseudogene 1, humanhuman

BASIC

Gene SMC4P1, Length 527 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4P1-201ENST00000414479 SPDYE16A6NNV3 312 aaPredicted RBP13.86□□□□□ -0.19
SMC4P1-201ENST00000414479 CLCN6P51797 869 aa13.86□□□□□ -0.19
SMC4P1-201ENST00000414479 ILDR1Q86SU0 546 aaPredicted RBP13.86□□□□□ -0.19
SMC4P1-201ENST00000414479 BARGINQ6ZT62 677 aa13.84□□□□□ -0.19
SMC4P1-201ENST00000414479 TMC2Q8TDI7 906 aa13.84□□□□□ -0.19
SMC4P1-201ENST00000414479 TRIM35Q9UPQ4 493 aa13.82□□□□□ -0.2
SMC4P1-201ENST00000414479 G3V3G9 751 aa13.81□□□□□ -0.2
SMC4P1-201ENST00000414479 BMP2KQ9NSY1 1161 aaPredicted RBP13.8□□□□□ -0.2
SMC4P1-201ENST00000414479 KRI1Q8N9T8 703 aaKnown RBP13.79□□□□□ -0.2
SMC4P1-201ENST00000414479 AK7Q96M32 723 aa13.79□□□□□ -0.2
SMC4P1-201ENST00000414479 PDIA6Q15084 440 aa13.77□□□□□ -0.21
SMC4P1-201ENST00000414479 DPYSL4O14531 572 aa13.76□□□□□ -0.21
SMC4P1-201ENST00000414479 MICALL2Q8IY33 904 aa13.76□□□□□ -0.21
SMC4P1-201ENST00000414479 MLLT3P42568 568 aaPredicted RBP13.75□□□□□ -0.21
SMC4P1-201ENST00000414479 FOXK1P85037 733 aa13.75□□□□□ -0.21
SMC4P1-201ENST00000414479 RBM26Q5T8P6 1007 aaKnown RBP13.75□□□□□ -0.21
SMC4P1-201ENST00000414479 DSG2Q14126 1118 aa13.74□□□□□ -0.21
SMC4P1-201ENST00000414479 EMILIN3Q9NT22 766 aa13.7□□□□□ -0.22
SMC4P1-201ENST00000414479 IER5LQ5T953 404 aa13.69□□□□□ -0.22
SMC4P1-201ENST00000414479 GALR2O43603 387 aaPredicted RBP13.68□□□□□ -0.22
SMC4P1-201ENST00000414479 ARXQ96QS3 562 aa13.68□□□□□ -0.22
SMC4P1-201ENST00000414479 OCEL1Q9H607 264 aa13.67□□□□□ -0.22
SMC4P1-201ENST00000414479 BOLA1Q9Y3E2 137 aa13.67□□□□□ -0.22
SMC4P1-201ENST00000414479 DPY19L2Q6NUT2 758 aa13.66□□□□□ -0.22
SMC4P1-201ENST00000414479 PLPP6Q8IY26 295 aa13.66□□□□□ -0.22
SMC4P1-201ENST00000414479 PDCD7Q8N8D1 485 aaKnown RBP13.66□□□□□ -0.22
SMC4P1-201ENST00000414479 MAP3K9P80192 1104 aa13.64□□□□□ -0.23
SMC4P1-201ENST00000414479 PLCG2P16885 1265 aa13.61□□□□□ -0.23
SMC4P1-201ENST00000414479 IRX5P78411 483 aaPredicted RBP13.61□□□□□ -0.23
SMC4P1-201ENST00000414479 L3MBTL3Q96JM7 780 aaPredicted RBP13.61□□□□□ -0.23
SMC4P1-201ENST00000414479 TMEM121BQ9BXQ6 578 aaPredicted RBP13.61□□□□□ -0.23
SMC4P1-201ENST00000414479 HAX1O00165 279 aa13.6□□□□□ -0.23
SMC4P1-201ENST00000414479 C2orf72A6NCS6 295 aa13.59□□□□□ -0.23
SMC4P1-201ENST00000414479 ATN1P54259 1190 aaPredicted RBP13.59□□□□□ -0.23
SMC4P1-201ENST00000414479 ZNF316A6NFI3 1004 aaPredicted RBP13.58□□□□□ -0.24
SMC4P1-201ENST00000414479 KDM4CQ9H3R0 1056 aa13.58□□□□□ -0.24
SMC4P1-201ENST00000414479 TRIM66O15016 1216 aa13.57□□□□□ -0.24
SMC4P1-201ENST00000414479 PDE4DQ08499 809 aa13.57□□□□□ -0.24
SMC4P1-201ENST00000414479 GPBP1L1Q9HC44 474 aaPredicted RBP13.57□□□□□ -0.24
SMC4P1-201ENST00000414479 GRXCR2A6NFK2 248 aa13.56□□□□□ -0.24
SMC4P1-201ENST00000414479 KIF3CO14782 793 aa13.56□□□□□ -0.24
SMC4P1-201ENST00000414479 ASTLQ6HA08 431 aaPredicted RBP13.56□□□□□ -0.24
SMC4P1-201ENST00000414479 MINK1Q8N4C8 1332 aaPredicted RBP13.56□□□□□ -0.24
SMC4P1-201ENST00000414479 NUTM2FA1L443 756 aa13.55□□□□□ -0.24
SMC4P1-201ENST00000414479 ATMINO43313 823 aaPredicted RBP13.55□□□□□ -0.24
SMC4P1-201ENST00000414479 TBC1D12O60347 775 aa13.54□□□□□ -0.24
SMC4P1-201ENST00000414479 MAP2K5Q13163 448 aa13.52□□□□□ -0.25
SMC4P1-201ENST00000414479 IL27Q8NEV9 243 aa13.51□□□□□ -0.25
SMC4P1-201ENST00000414479 UPF1Q92900 1129 aaKnown RBP eCLIP13.5□□□□□ -0.25
SMC4P1-201ENST00000414479 GPR37O15354 613 aa13.49□□□□□ -0.25
SMC4P1-201ENST00000414479 SEC24BO95487 1268 aa13.49□□□□□ -0.25
SMC4P1-201ENST00000414479 PTGER2P43116 358 aa13.49□□□□□ -0.25
SMC4P1-201ENST00000414479 FCHSD2O94868 740 aa13.48□□□□□ -0.25
SMC4P1-201ENST00000414479 HIC1Q14526 733 aa13.48□□□□□ -0.25
SMC4P1-201ENST00000414479 GNPATO15228 680 aa13.47□□□□□ -0.25
SMC4P1-201ENST00000414479 HOMEZQ8IX15 550 aa13.47□□□□□ -0.25
SMC4P1-201ENST00000414479 OXER1Q8TDS5 423 aa13.46□□□□□ -0.25
SMC4P1-201ENST00000414479 DDRGK1Q96HY6 314 aa13.46□□□□□ -0.25
SMC4P1-201ENST00000414479 CCDC102AQ96A19 550 aa13.44□□□□□ -0.26
SMC4P1-201ENST00000414479 IRF6O14896 467 aa13.43□□□□□ -0.26
SMC4P1-201ENST00000414479 OSBPP22059 807 aa13.43□□□□□ -0.26
SMC4P1-201ENST00000414479 AMHR2Q16671 573 aa13.42□□□□□ -0.26
SMC4P1-201ENST00000414479 DDX12PQ92771 950 aa13.41□□□□□ -0.26
SMC4P1-201ENST00000414479 EVI5O60447 810 aa13.39□□□□□ -0.27
SMC4P1-201ENST00000414479 C3orf67Q6ZVT6 689 aa13.38□□□□□ -0.27
SMC4P1-201ENST00000414479 DCBLD2Q96PD2 775 aa13.38□□□□□ -0.27
SMC4P1-201ENST00000414479 TTLL12Q14166 644 aaPredicted RBP13.36□□□□□ -0.27
SMC4P1-201ENST00000414479 SLC39A7Q92504 469 aa13.36□□□□□ -0.27
SMC4P1-201ENST00000414479 EVX2Q03828 476 aa13.34□□□□□ -0.27
SMC4P1-201ENST00000414479 FAM117AQ9C073 453 aa13.34□□□□□ -0.27
SMC4P1-201ENST00000414479 TMEM92Q6UXU6 159 aa13.33□□□□□ -0.28
SMC4P1-201ENST00000414479 PARP9Q8IXQ6 854 aa13.33□□□□□ -0.28
SMC4P1-201ENST00000414479 PTCD2Q8WV60 388 aaKnown RBP13.33□□□□□ -0.28
SMC4P1-201ENST00000414479 SUPT5HO00267 1087 aaKnown RBP13.32□□□□□ -0.28
SMC4P1-201ENST00000414479 PTGDRQ13258 359 aa13.32□□□□□ -0.28
SMC4P1-201ENST00000414479 EPAS1Q99814 870 aa13.31□□□□□ -0.28
SMC4P1-201ENST00000414479 C7P10643 843 aa13.3□□□□□ -0.28
SMC4P1-201ENST00000414479 SLC34A2O95436 690 aa13.29□□□□□ -0.28
SMC4P1-201ENST00000414479 ZMYND15Q9H091 742 aa13.29□□□□□ -0.28
SMC4P1-201ENST00000414479 GOPCQ9HD26 462 aa13.28□□□□□ -0.28
SMC4P1-201ENST00000414479 GABBR2O75899 941 aa13.27□□□□□ -0.29
SMC4P1-201ENST00000414479 RSPH6AQ9H0K4 717 aa13.27□□□□□ -0.29
SMC4P1-201ENST00000414479 PHF14O94880 888 aa13.26□□□□□ -0.29
SMC4P1-201ENST00000414479 COLQQ9Y215 455 aaPredicted RBP13.26□□□□□ -0.29
SMC4P1-201ENST00000414479 FECHP22830 423 aa13.25□□□□□ -0.29
SMC4P1-201ENST00000414479 EN1Q05925 392 aaPredicted RBP13.25□□□□□ -0.29
SMC4P1-201ENST00000414479 ANO8Q9HCE9 1232 aaPredicted RBP13.25□□□□□ -0.29
SMC4P1-201ENST00000414479 MAP3K7O43318 606 aa13.24□□□□□ -0.29
SMC4P1-201ENST00000414479 FLIIQ13045 1269 aa13.24□□□□□ -0.29
SMC4P1-201ENST00000414479 PLEKHG3A1L390 1219 aa13.23□□□□□ -0.29
SMC4P1-201ENST00000414479 GIGYF2Q6Y7W6 1299 aaKnown RBP13.22□□□□□ -0.29
SMC4P1-201ENST00000414479 CLCN1P35523 988 aa13.21□□□□□ -0.29
SMC4P1-201ENST00000414479 METRNQ9UJH8 293 aa13.2□□□□□ -0.3
SMC4P1-201ENST00000414479 PELP1Q8IZL8 1130 aaKnown RBP13.19□□□□□ -0.3
SMC4P1-201ENST00000414479 FBXW7Q969H0 707 aa13.19□□□□□ -0.3
SMC4P1-201ENST00000414479 PCMTD1Q96MG8 357 aaPredicted RBP13.19□□□□□ -0.3
SMC4P1-201ENST00000414479 TYW1BQ6NUM6 668 aa13.18□□□□□ -0.3
SMC4P1-201ENST00000414479 SLAIN1Q8ND83 568 aa13.18□□□□□ -0.3
SMC4P1-201ENST00000414479 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.18□□□□□ -0.3
SMC4P1-201ENST00000414479 PRIM1P49642 420 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms