RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 GPIHBP1Q8IV16 184 aa8.82□□□□□ -1
CBX1P3-201ENST00000413296 ZNF692Q9BU19 519 aaPredicted RBP8.82□□□□□ -1
CBX1P3-201ENST00000413296 SPINK5Q9NQ38 1064 aaPredicted RBP8.82□□□□□ -1
CBX1P3-201ENST00000413296 AMOTL2Q9Y2J4 779 aa8.82□□□□□ -1
CBX1P3-201ENST00000413296 DHX37Q8IY37 1157 aaKnown RBP8.8□□□□□ -1
CBX1P3-201ENST00000413296 PDE4CQ08493 712 aa8.78□□□□□ -1
CBX1P3-201ENST00000413296 ZBTB12Q9Y330 459 aaPredicted RBP8.78□□□□□ -1
CBX1P3-201ENST00000413296 NUBP1P53384 320 aa8.77□□□□□ -1.01
CBX1P3-201ENST00000413296 MCM6Q14566 821 aa8.76□□□□□ -1.01
CBX1P3-201ENST00000413296 RBM26Q5T8P6 1007 aaKnown RBP8.76□□□□□ -1.01
CBX1P3-201ENST00000413296 GOPCQ9HD26 462 aa8.76□□□□□ -1.01
CBX1P3-201ENST00000413296 MYT1LQ9UL68 1186 aa8.75□□□□□ -1.01
CBX1P3-201ENST00000413296 CHRM1P11229 460 aaPredicted RBP8.74□□□□□ -1.01
CBX1P3-201ENST00000413296 PABPN1Q86U42 306 aaKnown RBP eCLIP8.74□□□□□ -1.01
CBX1P3-201ENST00000413296 POTEDQ86YR6 584 aa8.74□□□□□ -1.01
CBX1P3-201ENST00000413296 FNBP4Q8N3X1 1017 aaPredicted RBP8.74□□□□□ -1.01
CBX1P3-201ENST00000413296 UBE2Q2Q8WVN8 375 aa8.74□□□□□ -1.01
CBX1P3-201ENST00000413296 PPM1GO15355 546 aaPredicted RBP8.73□□□□□ -1.01
CBX1P3-201ENST00000413296 C1QBPQ07021 282 aaKnown RBP8.73□□□□□ -1.01
CBX1P3-201ENST00000413296 PPP1R15AO75807 674 aaPredicted RBP8.72□□□□□ -1.01
CBX1P3-201ENST00000413296 CCDC125Q86Z20 511 aa8.72□□□□□ -1.01
CBX1P3-201ENST00000413296 KCNA1Q09470 495 aa8.71□□□□□ -1.02
CBX1P3-201ENST00000413296 PLSCR2Q9NRY7 297 aa8.71□□□□□ -1.02
CBX1P3-201ENST00000413296 SSUH2Q9Y2M2 353 aa8.71□□□□□ -1.02
CBX1P3-201ENST00000413296 CCDC27Q2M243 656 aa8.7□□□□□ -1.02
CBX1P3-201ENST00000413296 PCMTD1Q96MG8 357 aaPredicted RBP8.7□□□□□ -1.02
CBX1P3-201ENST00000413296 ACIN1Q9UKV3 1341 aaKnown RBP8.7□□□□□ -1.02
CBX1P3-201ENST00000413296 FAM9AQ8IZU1 332 aaPredicted RBP8.69□□□□□ -1.02
CBX1P3-201ENST00000413296 FAM212AQ96EL1 285 aa8.68□□□□□ -1.02
CBX1P3-201ENST00000413296 CAPN15O75808 1086 aa8.67□□□□□ -1.02
CBX1P3-201ENST00000413296 CANXP27824 592 aaKnown RBP8.67□□□□□ -1.02
CBX1P3-201ENST00000413296 POM121Q96HA1 1249 aa8.67□□□□□ -1.02
CBX1P3-201ENST00000413296 ARIH1Q9Y4X5 557 aaPredicted RBP8.67□□□□□ -1.02
CBX1P3-201ENST00000413296 BRD1O95696 1058 aa8.66□□□□□ -1.02
CBX1P3-201ENST00000413296 SPDYE2BA6NHP3 402 aa8.65□□□□□ -1.02
CBX1P3-201ENST00000413296 SPDYE6P0CI01 402 aa8.65□□□□□ -1.02
CBX1P3-201ENST00000413296 SPDYE2Q495Y8 402 aa8.65□□□□□ -1.02
CBX1P3-201ENST00000413296 MLLT3P42568 568 aaPredicted RBP8.63□□□□□ -1.03
CBX1P3-201ENST00000413296 PARP9Q8IXQ6 854 aa8.63□□□□□ -1.03
CBX1P3-201ENST00000413296 CWC22Q9HCG8 908 aaKnown RBP8.63□□□□□ -1.03
CBX1P3-201ENST00000413296 IGSF5Q9NSI5 407 aa8.63□□□□□ -1.03
CBX1P3-201ENST00000413296 UNCXA6NJT0 531 aa8.61□□□□□ -1.03
CBX1P3-201ENST00000413296 AMHR2Q16671 573 aa8.61□□□□□ -1.03
CBX1P3-201ENST00000413296 MINK1Q8N4C8 1332 aaPredicted RBP8.6□□□□□ -1.03
CBX1P3-201ENST00000413296 ZNF330Q9Y3S2 320 aaPredicted RBP8.59□□□□□ -1.03
CBX1P3-201ENST00000413296 SND1Q7KZF4 910 aaKnown RBP eCLIP8.58□□□□□ -1.04
CBX1P3-201ENST00000413296 CCDC102AQ96A19 550 aa8.58□□□□□ -1.04
CBX1P3-201ENST00000413296 MFRPQ9BY79 579 aa8.58□□□□□ -1.04
CBX1P3-201ENST00000413296 ARID4BQ4LE39 1312 aaPredicted RBP8.57□□□□□ -1.04
CBX1P3-201ENST00000413296 ABCB7O75027 752 aa8.56□□□□□ -1.04
CBX1P3-201ENST00000413296 PPP1R37O75864 691 aa8.56□□□□□ -1.04
CBX1P3-201ENST00000413296 LARP6Q9BRS8 491 aaKnown RBP8.56□□□□□ -1.04
CBX1P3-201ENST00000413296 USTQ9Y2C2 406 aa8.56□□□□□ -1.04
CBX1P3-201ENST00000413296 COG6Q9Y2V7 657 aa8.56□□□□□ -1.04
CBX1P3-201ENST00000413296 IVNS1ABPQ9Y6Y0 642 aa8.56□□□□□ -1.04
CBX1P3-201ENST00000413296 PYGBP11216 843 aa8.55□□□□□ -1.04
CBX1P3-201ENST00000413296 DSG3P32926 999 aa8.55□□□□□ -1.04
CBX1P3-201ENST00000413296 TAF7LQ5H9L4 462 aa8.55□□□□□ -1.04
CBX1P3-201ENST00000413296 NCKAP5LQ9HCH0 1330 aa8.54□□□□□ -1.04
CBX1P3-201ENST00000413296 RBM47A0AV96 593 aaKnown RBP8.54□□□□□ -1.04
CBX1P3-201ENST00000413296 GPR37O15354 613 aa8.54□□□□□ -1.04
CBX1P3-201ENST00000413296 MAP2K5Q13163 448 aa8.54□□□□□ -1.04
CBX1P3-201ENST00000413296 MFSD10Q14728 455 aa8.54□□□□□ -1.04
CBX1P3-201ENST00000413296 PDE4AP27815 886 aa8.53□□□□□ -1.04
CBX1P3-201ENST00000413296 SH3D19Q5HYK7 790 aa8.53□□□□□ -1.04
CBX1P3-201ENST00000413296 CERS3Q8IU89 383 aa8.53□□□□□ -1.04
CBX1P3-201ENST00000413296 SMARCA5O60264 1052 aaPredicted RBP8.52□□□□□ -1.05
CBX1P3-201ENST00000413296 TTLL12Q14166 644 aaPredicted RBP8.52□□□□□ -1.05
CBX1P3-201ENST00000413296 SPATA32Q96LK8 384 aa8.52□□□□□ -1.05
CBX1P3-201ENST00000413296 SPDYE5A6NIY4 337 aa8.51□□□□□ -1.05
CBX1P3-201ENST00000413296 IRF6O14896 467 aa8.51□□□□□ -1.05
CBX1P3-201ENST00000413296 CSB-PGBD3P0DP91 1061 aa8.51□□□□□ -1.05
CBX1P3-201ENST00000413296 NCLP19338 710 aaKnown RBP8.51□□□□□ -1.05
CBX1P3-201ENST00000413296 CAMK2BQ13554 666 aa8.51□□□□□ -1.05
CBX1P3-201ENST00000413296 OSCARQ8IYS5 282 aa8.5□□□□□ -1.05
CBX1P3-201ENST00000413296 ANKRD13AQ8IZ07 590 aa8.5□□□□□ -1.05
CBX1P3-201ENST00000413296 CALR3Q96L12 384 aaKnown RBP8.5□□□□□ -1.05
CBX1P3-201ENST00000413296 DRC1Q96MC2 740 aa8.5□□□□□ -1.05
CBX1P3-201ENST00000413296 PSMD1Q99460 953 aa8.5□□□□□ -1.05
CBX1P3-201ENST00000413296 ZNF592Q92610 1267 aa8.49□□□□□ -1.05
CBX1P3-201ENST00000413296 PBXIP1Q96AQ6 731 aa8.49□□□□□ -1.05
CBX1P3-201ENST00000413296 DDX27Q96GQ7 796 aaKnown RBP8.49□□□□□ -1.05
CBX1P3-201ENST00000413296 CC2D2BQ6DHV5 1058 aa8.48□□□□□ -1.05
CBX1P3-201ENST00000413296 BCCIPQ9P287 314 aaKnown RBP eCLIP8.48□□□□□ -1.05
CBX1P3-201ENST00000413296 MRRFQ96E11 262 aaKnown RBP8.47□□□□□ -1.05
CBX1P3-201ENST00000413296 KIAA1522Q9P206 1035 aaPredicted RBP8.47□□□□□ -1.05
CBX1P3-201ENST00000413296 MS4A1P11836 297 aa8.46□□□□□ -1.06
CBX1P3-201ENST00000413296 RASEFQ8IZ41 740 aa8.46□□□□□ -1.06
CBX1P3-201ENST00000413296 CADPSQ9ULU8 1353 aa8.46□□□□□ -1.06
CBX1P3-201ENST00000413296 TBC1D12O60347 775 aa8.45□□□□□ -1.06
CBX1P3-201ENST00000413296 SKIV2LQ15477 1246 aaKnown RBP8.45□□□□□ -1.06
CBX1P3-201ENST00000413296 GIGYF2Q6Y7W6 1299 aaKnown RBP8.45□□□□□ -1.06
CBX1P3-201ENST00000413296 SREK1Q8WXA9 508 aaKnown RBP8.45□□□□□ -1.06
CBX1P3-201ENST00000413296 PDAP1Q13442 181 aaKnown RBP8.44□□□□□ -1.06
CBX1P3-201ENST00000413296 ZNF467Q7Z7K2 595 aaPredicted RBP8.44□□□□□ -1.06
CBX1P3-201ENST00000413296 TICAM2Q86XR7 235 aa8.44□□□□□ -1.06
CBX1P3-201ENST00000413296 WWC1Q8IX03 1113 aa8.44□□□□□ -1.06
CBX1P3-201ENST00000413296 OXER1Q8TDS5 423 aa8.44□□□□□ -1.06
CBX1P3-201ENST00000413296 ATP1B4Q9UN42 357 aaPredicted RBP8.44□□□□□ -1.06
CBX1P3-201ENST00000413296 TSR1Q2NL82 804 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms