RNA–Protein interactions for RNA: ENST00000409892.5

RAB1A-204, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB1A, Length 2,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-204ENST00000409892 ZHX1Q9UKY1 873 aaPredicted RBP23.44■■□□□ 1.34
RAB1A-204ENST00000409892 MTERF4Q7Z6M4 381 aaKnown RBP23.44■■□□□ 1.34
RAB1A-204ENST00000409892 RAB3GAP2Q9H2M9 1393 aa23.44■■□□□ 1.34
RAB1A-204ENST00000409892 GOLGA6L3A6NEY3 463 aa23.42■■□□□ 1.34
RAB1A-204ENST00000409892 SLC4A3P48751 1232 aa23.42■■□□□ 1.34
RAB1A-204ENST00000409892 TEX2Q8IWB9 1127 aa23.42■■□□□ 1.34
RAB1A-204ENST00000409892 CC2D2AQ9P2K1 1620 aa23.41■■□□□ 1.34
RAB1A-204ENST00000409892 ARID4BQ4LE39 1312 aaPredicted RBP23.41■■□□□ 1.34
RAB1A-204ENST00000409892 CHRM1P11229 460 aaPredicted RBP23.4■■□□□ 1.34
RAB1A-204ENST00000409892 PPP4R3BQ5MIZ7 849 aa23.38■■□□□ 1.33
RAB1A-204ENST00000409892 KIAA1211Q6ZU35 1233 aa23.37■■□□□ 1.33
RAB1A-204ENST00000409892 NCOA2Q15596 1464 aa23.36■■□□□ 1.33
RAB1A-204ENST00000409892 ZFP91Q96JP5 570 aaPredicted RBP23.36■■□□□ 1.33
RAB1A-204ENST00000409892 VGFO15240 615 aaPredicted RBP23.35■■□□□ 1.33
RAB1A-204ENST00000409892 ZNF830Q96NB3 372 aaPredicted RBP23.34■■□□□ 1.33
RAB1A-204ENST00000409892 KIF20AO95235 890 aa23.34■■□□□ 1.33
RAB1A-204ENST00000409892 RIPK4P57078 832 aa23.34■■□□□ 1.33
RAB1A-204ENST00000409892 CCDC184Q52MB2 194 aa23.33■■□□□ 1.33
RAB1A-204ENST00000409892 TNNT2P45379 298 aaPredicted RBP23.33■■□□□ 1.32
RAB1A-204ENST00000409892 FAM9BQ8IZU0 186 aa23.33■■□□□ 1.32
RAB1A-204ENST00000409892 CCNB3Q8WWL7 1395 aa23.32■■□□□ 1.32
RAB1A-204ENST00000409892 ERBB4Q15303 1308 aa23.31■■□□□ 1.32
RAB1A-204ENST00000409892 FHAD1B1AJZ9 1412 aa23.31■■□□□ 1.32
RAB1A-204ENST00000409892 CNTLNQ9NXG0 1405 aa23.31■■□□□ 1.32
RAB1A-204ENST00000409892 MRE11P49959 708 aa23.3■■□□□ 1.32
RAB1A-204ENST00000409892 RUSC2Q8N2Y8 1516 aa23.3■■□□□ 1.32
RAB1A-204ENST00000409892 PANK2Q9BZ23 570 aa23.29■■□□□ 1.32
RAB1A-204ENST00000409892 CHMP4AQ9BY43 222 aa23.28■■□□□ 1.32
RAB1A-204ENST00000409892 MRS2Q9HD23 443 aa23.28■■□□□ 1.32
RAB1A-204ENST00000409892 SETD5Q9C0A6 1442 aa23.26■■□□□ 1.31
RAB1A-204ENST00000409892 TAF3Q5VWG9 929 aa23.26■■□□□ 1.31
RAB1A-204ENST00000409892 FOXD1Q16676 465 aa23.25■■□□□ 1.31
RAB1A-204ENST00000409892 GTPBP4Q9BZE4 634 aaKnown RBP23.25■■□□□ 1.31
RAB1A-204ENST00000409892 ISY1Q9ULR0 285 aaKnown RBP23.25■■□□□ 1.31
RAB1A-204ENST00000409892 DHX37Q8IY37 1157 aaKnown RBP23.25■■□□□ 1.31
RAB1A-204ENST00000409892 MYH16Q9H6N6 1097 aa23.25■■□□□ 1.31
RAB1A-204ENST00000409892 OFD1O75665 1012 aa23.24■■□□□ 1.31
RAB1A-204ENST00000409892 ANP32BQ92688 251 aaKnown RBP23.24■■□□□ 1.31
RAB1A-204ENST00000409892 ZSCAN20P17040 1043 aaPredicted RBP23.24■■□□□ 1.31
RAB1A-204ENST00000409892 PRKRIP1Q9H875 184 aaPredicted RBP23.24■■□□□ 1.31
RAB1A-204ENST00000409892 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.23■■□□□ 1.31
RAB1A-204ENST00000409892 LETM1O95202 739 aaPredicted RBP23.22■■□□□ 1.31
RAB1A-204ENST00000409892 PLCD3Q8N3E9 789 aa23.19■■□□□ 1.3
RAB1A-204ENST00000409892 SECISBP2LQ93073 1101 aaKnown RBP23.19■■□□□ 1.3
RAB1A-204ENST00000409892 TRIM44Q96DX7 344 aaPredicted RBP23.19■■□□□ 1.3
RAB1A-204ENST00000409892 FAM13BQ9NYF5 915 aa23.19■■□□□ 1.3
RAB1A-204ENST00000409892 RRP1P56182 461 aaKnown RBP23.19■■□□□ 1.3
RAB1A-204ENST00000409892 EXOC6Q8TAG9 804 aa23.19■■□□□ 1.3
RAB1A-204ENST00000409892 PRDM10Q9NQV6 1147 aa23.17■■□□□ 1.3
RAB1A-204ENST00000409892 ERICH3Q5RHP9 1530 aa23.17■■□□□ 1.3
RAB1A-204ENST00000409892 BAZ1AQ9NRL2 1556 aaPredicted RBP23.14■■□□□ 1.3
RAB1A-204ENST00000409892 CCDC94Q9BW85 323 aaPredicted RBP23.14■■□□□ 1.29
RAB1A-204ENST00000409892 VGLL3A8MV65 326 aa23.13■■□□□ 1.29
RAB1A-204ENST00000409892 FAM161AQ3B820 660 aa23.13■■□□□ 1.29
RAB1A-204ENST00000409892 PHLDB1Q86UU1 1377 aa23.12■■□□□ 1.29
RAB1A-204ENST00000409892 GRPEL1Q9HAV7 217 aa23.11■■□□□ 1.29
RAB1A-204ENST00000409892 BCCIPQ9P287 314 aaKnown RBP eCLIP23.11■■□□□ 1.29
RAB1A-204ENST00000409892 DYNC1I1O14576 645 aa23.11■■□□□ 1.29
RAB1A-204ENST00000409892 TONSLQ96HA7 1378 aa23.09■■□□□ 1.29
RAB1A-204ENST00000409892 RNF216Q9NWF9 866 aaPredicted RBP23.07■■□□□ 1.28
RAB1A-204ENST00000409892 C8orf34Q49A92 452 aa23.06■■□□□ 1.28
RAB1A-204ENST00000409892 KANK4Q5T7N3 995 aaPredicted RBP23.06■■□□□ 1.28
RAB1A-204ENST00000409892 RGS22Q8NE09 1264 aa23.06■■□□□ 1.28
RAB1A-204ENST00000409892 SYNJ1O43426 1573 aa23.06■■□□□ 1.28
RAB1A-204ENST00000409892 CDK11BP21127 795 aaKnown RBP23.06■■□□□ 1.28
RAB1A-204ENST00000409892 SAMD1Q6SPF0 538 aaPredicted RBP23.06■■□□□ 1.28
RAB1A-204ENST00000409892 VIRMAQ69YN4 1812 aaKnown RBP23.05■■□□□ 1.28
RAB1A-204ENST00000409892 IRX3P78415 501 aaPredicted RBP23.05■■□□□ 1.28
RAB1A-204ENST00000409892 WIZO95785 1651 aa23.04■■□□□ 1.28
RAB1A-204ENST00000409892 KTN1Q86UP2 1357 aaKnown RBP23.04■■□□□ 1.28
RAB1A-204ENST00000409892 ZSCAN30Q86W11 494 aa23.03■■□□□ 1.28
RAB1A-204ENST00000409892 ABCA5Q8WWZ7 1642 aa23.03■■□□□ 1.28
RAB1A-204ENST00000409892 BECN1Q14457 450 aa23.03■■□□□ 1.28
RAB1A-204ENST00000409892 SLC20A2Q08357 652 aa23.02■■□□□ 1.28
RAB1A-204ENST00000409892 ANTXR1Q9H6X2 564 aa23.01■■□□□ 1.27
RAB1A-204ENST00000409892 MROH2BQ7Z745 1585 aa23.01■■□□□ 1.27
RAB1A-204ENST00000409892 HOMEZQ8IX15 550 aa23.01■■□□□ 1.27
RAB1A-204ENST00000409892 UQCRHLA0A096LP55 91 aa22.99■■□□□ 1.27
RAB1A-204ENST00000409892 UQCRHP07919 91 aa22.99■■□□□ 1.27
RAB1A-204ENST00000409892 DNTTIP2Q5QJE6 756 aaKnown RBP22.98■■□□□ 1.27
RAB1A-204ENST00000409892 ARAP1Q96P48 1450 aa22.97■■□□□ 1.27
RAB1A-204ENST00000409892 MAP3K1Q13233 1512 aa22.97■■□□□ 1.27
RAB1A-204ENST00000409892 MCM4P33991 863 aa22.97■■□□□ 1.27
RAB1A-204ENST00000409892 KDM5BQ9UGL1 1544 aa22.96■■□□□ 1.27
RAB1A-204ENST00000409892 R3HCC1Q9Y3T6 440 aaKnown RBP22.95■■□□□ 1.26
RAB1A-204ENST00000409892 CCDC173Q0VFZ6 552 aa22.94■■□□□ 1.26
RAB1A-204ENST00000409892 NCOA1Q15788 1441 aa22.94■■□□□ 1.26
RAB1A-204ENST00000409892 MSNP26038 577 aaKnown RBP22.93■■□□□ 1.26
RAB1A-204ENST00000409892 PPP1R9BQ96SB3 815 aa22.93■■□□□ 1.26
RAB1A-204ENST00000409892 RCAN3Q9UKA8 241 aa22.93■■□□□ 1.26
RAB1A-204ENST00000409892 KDM2BQ8NHM5 1336 aa22.93■■□□□ 1.26
RAB1A-204ENST00000409892 HSPA5P11021 654 aaKnown RBP22.92■■□□□ 1.26
RAB1A-204ENST00000409892 MYOM3Q5VTT5 1437 aa22.92■■□□□ 1.26
RAB1A-204ENST00000409892 POLR1AO95602 1720 aaPredicted RBP22.92■■□□□ 1.26
RAB1A-204ENST00000409892 TRAK2O60296 914 aa22.91■■□□□ 1.26
RAB1A-204ENST00000409892 CCDC7Q96M83 1385 aa22.91■■□□□ 1.26
RAB1A-204ENST00000409892 GZF1Q9H116 711 aaPredicted RBP22.91■■□□□ 1.26
RAB1A-204ENST00000409892 MMP14P50281 582 aa22.9■■□□□ 1.26
RAB1A-204ENST00000409892 ZNF500O60304 480 aaPredicted RBP22.87■■□□□ 1.25
RAB1A-204ENST00000409892 CENPQQ7L2Z9 268 aaPredicted RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms