RNA–Protein interactions for RNA: ENST00000401669.6

NRXN1-204, Transcript of neurexin 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NRXN1, Length 5,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-204ENST00000401669 HDGFL2Q7Z4V5 671 aaPredicted RBP20.41■□□□□ 0.86
NRXN1-204ENST00000401669 NOC3LQ8WTT2 800 aaKnown RBP20.4■□□□□ 0.86
NRXN1-204ENST00000401669 GGT6Q6P531 493 aa20.4■□□□□ 0.86
NRXN1-204ENST00000401669 GORABQ5T7V8 394 aa20.39■□□□□ 0.85
NRXN1-204ENST00000401669 SPRYD3Q8NCJ5 442 aa20.38■□□□□ 0.85
NRXN1-204ENST00000401669 CCNB3Q8WWL7 1395 aa20.38■□□□□ 0.85
NRXN1-204ENST00000401669 MSNP26038 577 aaKnown RBP20.37■□□□□ 0.85
NRXN1-204ENST00000401669 RTN4Q9NQC3 1192 aaKnown RBP20.36■□□□□ 0.85
NRXN1-204ENST00000401669 RB1CC1Q8TDY2 1594 aa20.36■□□□□ 0.85
NRXN1-204ENST00000401669 TAF7LQ5H9L4 462 aa20.36■□□□□ 0.85
NRXN1-204ENST00000401669 CHMP3Q9Y3E7 222 aa20.35■□□□□ 0.85
NRXN1-204ENST00000401669 IPO8O15397 1037 aaKnown RBP20.34■□□□□ 0.85
NRXN1-204ENST00000401669 SIN3AQ96ST3 1273 aa20.34■□□□□ 0.85
NRXN1-204ENST00000401669 GOLGA3Q08378 1498 aa20.33■□□□□ 0.85
NRXN1-204ENST00000401669 NOP58Q9Y2X3 529 aaKnown RBP20.33■□□□□ 0.84
NRXN1-204ENST00000401669 PDE4CQ08493 712 aa20.32■□□□□ 0.84
NRXN1-204ENST00000401669 HTATSF1O43719 755 aaKnown RBP20.3■□□□□ 0.84
NRXN1-204ENST00000401669 CALD1Q05682 793 aaKnown RBP20.3■□□□□ 0.84
NRXN1-204ENST00000401669 AMER1Q5JTC6 1135 aaPredicted RBP20.3■□□□□ 0.84
NRXN1-204ENST00000401669 B4GALNT3Q6L9W6 998 aa20.29■□□□□ 0.84
NRXN1-204ENST00000401669 CHMP4AQ9BY43 222 aa20.28■□□□□ 0.84
NRXN1-204ENST00000401669 KIF27Q86VH2 1401 aa20.28■□□□□ 0.84
NRXN1-204ENST00000401669 RASSF8Q8NHQ8 419 aa20.28■□□□□ 0.84
NRXN1-204ENST00000401669 CCDC34Q96HJ3 373 aa20.26■□□□□ 0.83
NRXN1-204ENST00000401669 STK31Q9BXU1 1019 aa20.26■□□□□ 0.83
NRXN1-204ENST00000401669 U2AF1L5P0DN76 240 aaPredicted RBP20.26■□□□□ 0.83
NRXN1-204ENST00000401669 U2AF1Q01081 240 aaKnown RBP eCLIP20.26■□□□□ 0.83
NRXN1-204ENST00000401669 GTF2E1P29083 439 aaPredicted RBP20.25■□□□□ 0.83
NRXN1-204ENST00000401669 HSP90B1P14625 803 aaKnown RBP20.25■□□□□ 0.83
NRXN1-204ENST00000401669 CEP162Q5TB80 1403 aa20.25■□□□□ 0.83
NRXN1-204ENST00000401669 FRAT2O75474 233 aaPredicted RBP20.24■□□□□ 0.83
NRXN1-204ENST00000401669 SPAG9O60271 1321 aaKnown RBP20.24■□□□□ 0.83
NRXN1-204ENST00000401669 GPATCH3Q96I76 525 aa20.24■□□□□ 0.83
NRXN1-204ENST00000401669 TPM4P67936 248 aa20.23■□□□□ 0.83
NRXN1-204ENST00000401669 ITPRIPQ8IWB1 547 aa20.23■□□□□ 0.83
NRXN1-204ENST00000401669 EEA1Q15075 1411 aa20.23■□□□□ 0.83
NRXN1-204ENST00000401669 NACADO15069 1562 aa20.23■□□□□ 0.83
NRXN1-204ENST00000401669 A0A0U1RQG5 324 aaPredicted RBP20.22■□□□□ 0.83
NRXN1-204ENST00000401669 VPS53Q5VIR6 699 aa20.22■□□□□ 0.83
NRXN1-204ENST00000401669 HDAC5Q9UQL6 1122 aa20.21■□□□□ 0.83
NRXN1-204ENST00000401669 CEP89Q96ST8 783 aa20.2■□□□□ 0.82
NRXN1-204ENST00000401669 MARCH6O60337 910 aa20.2■□□□□ 0.82
NRXN1-204ENST00000401669 TOMM22Q9NS69 142 aa20.2■□□□□ 0.82
NRXN1-204ENST00000401669 CREBRFQ8IUR6 639 aa20.19■□□□□ 0.82
NRXN1-204ENST00000401669 GBP4Q96PP9 640 aa20.19■□□□□ 0.82
NRXN1-204ENST00000401669 TRIM6-TRIM34B2RNG4 842 aa20.17■□□□□ 0.82
NRXN1-204ENST00000401669 RWDD1Q9H446 243 aaPredicted RBP20.17■□□□□ 0.82
NRXN1-204ENST00000401669 WRNQ14191 1432 aaPredicted RBP eCLIP20.16■□□□□ 0.82
NRXN1-204ENST00000401669 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.16■□□□□ 0.82
NRXN1-204ENST00000401669 EID1Q9Y6B2 187 aa20.16■□□□□ 0.82
NRXN1-204ENST00000401669 EIF4G1Q04637 1599 aaKnown RBP20.15■□□□□ 0.82
NRXN1-204ENST00000401669 NGDNQ8NEJ9 315 aaKnown RBP20.15■□□□□ 0.82
NRXN1-204ENST00000401669 KTN1Q86UP2 1357 aaKnown RBP20.15■□□□□ 0.82
NRXN1-204ENST00000401669 SYAP1Q96A49 352 aaPredicted RBP20.14■□□□□ 0.82
NRXN1-204ENST00000401669 PTMSP20962 102 aa20.14■□□□□ 0.81
NRXN1-204ENST00000401669 KRI1Q8N9T8 703 aaKnown RBP20.13■□□□□ 0.81
NRXN1-204ENST00000401669 SLC4A10Q6U841 1118 aa20.13■□□□□ 0.81
NRXN1-204ENST00000401669 HMMRO75330 724 aa20.12■□□□□ 0.81
NRXN1-204ENST00000401669 BAZ1BQ9UIG0 1483 aaKnown RBP20.12■□□□□ 0.81
NRXN1-204ENST00000401669 PKD2Q13563 968 aa20.11■□□□□ 0.81
NRXN1-204ENST00000401669 LTV1Q96GA3 475 aaPredicted RBP20.11■□□□□ 0.81
NRXN1-204ENST00000401669 MSH5O43196 834 aa20.1■□□□□ 0.81
NRXN1-204ENST00000401669 AMPHP49418 695 aa20.1■□□□□ 0.81
NRXN1-204ENST00000401669 ANO8Q9HCE9 1232 aaPredicted RBP20.09■□□□□ 0.81
NRXN1-204ENST00000401669 GZF1Q9H116 711 aaPredicted RBP20.07■□□□□ 0.8
NRXN1-204ENST00000401669 TERF2IPQ9NYB0 399 aa20.07■□□□□ 0.8
NRXN1-204ENST00000401669 GOLGA6L1Q8N7Z2 621 aa20.07■□□□□ 0.8
NRXN1-204ENST00000401669 SMC4Q9NTJ3 1288 aa20.07■□□□□ 0.8
NRXN1-204ENST00000401669 CEP164Q9UPV0 1460 aa20.06■□□□□ 0.8
NRXN1-204ENST00000401669 TPM3P06753 285 aa20.05■□□□□ 0.8
NRXN1-204ENST00000401669 NOL8Q76FK4 1167 aaKnown RBP20.05■□□□□ 0.8
NRXN1-204ENST00000401669 WWC1Q8IX03 1113 aa20.05■□□□□ 0.8
NRXN1-204ENST00000401669 FHAD1B1AJZ9 1412 aa20.05■□□□□ 0.8
NRXN1-204ENST00000401669 CSPP1Q1MSJ5 1256 aa20.05■□□□□ 0.8
NRXN1-204ENST00000401669 SLKQ9H2G2 1235 aaPredicted RBP20.05■□□□□ 0.8
NRXN1-204ENST00000401669 HSPA5P11021 654 aaKnown RBP20.04■□□□□ 0.8
NRXN1-204ENST00000401669 MFAP1P55081 439 aaKnown RBP20.04■□□□□ 0.8
NRXN1-204ENST00000401669 ROCK2O75116 1388 aaKnown RBP20.04■□□□□ 0.8
NRXN1-204ENST00000401669 NUTM2FA1L443 756 aa20.03■□□□□ 0.8
NRXN1-204ENST00000401669 SF3A1Q15459 793 aaKnown RBP20.03■□□□□ 0.8
NRXN1-204ENST00000401669 EFCAB2Q5VUJ9 269 aa20.03■□□□□ 0.8
NRXN1-204ENST00000401669 PES1O00541 588 aaKnown RBP20.02■□□□□ 0.8
NRXN1-204ENST00000401669 PMFBP1Q8TBY8 1022 aa20.02■□□□□ 0.8
NRXN1-204ENST00000401669 ARID3AQ99856 593 aa20.02■□□□□ 0.8
NRXN1-204ENST00000401669 CTDP1Q9Y5B0 961 aaPredicted RBP20.01■□□□□ 0.79
NRXN1-204ENST00000401669 KIF3AQ9Y496 699 aa20.01■□□□□ 0.79
NRXN1-204ENST00000401669 TCEAL9Q9UHQ7 104 aa20.01■□□□□ 0.79
NRXN1-204ENST00000401669 RCAN3Q9UKA8 241 aa20.01■□□□□ 0.79
NRXN1-204ENST00000401669 LMOD3Q0VAK6 560 aa20.01■□□□□ 0.79
NRXN1-204ENST00000401669 NUTM2DQ5VT03 806 aaPredicted RBP20■□□□□ 0.79
NRXN1-204ENST00000401669 TNIKQ9UKE5 1360 aa20■□□□□ 0.79
NRXN1-204ENST00000401669 EVA1CP58658 441 aa19.99■□□□□ 0.79
NRXN1-204ENST00000401669 EIF3AQ14152 1382 aaKnown RBP19.99■□□□□ 0.79
NRXN1-204ENST00000401669 KIF3BO15066 747 aa19.99■□□□□ 0.79
NRXN1-204ENST00000401669 FOXD1Q16676 465 aa19.99■□□□□ 0.79
NRXN1-204ENST00000401669 TRIM34Q9BYJ4 488 aa19.99■□□□□ 0.79
NRXN1-204ENST00000401669 RAD21O60216 631 aa19.99■□□□□ 0.79
NRXN1-204ENST00000401669 KIF16BQ96L93 1317 aa19.98■□□□□ 0.79
NRXN1-204ENST00000401669 TPD52L1Q16890 204 aaPredicted RBP19.98■□□□□ 0.79
NRXN1-204ENST00000401669 AKAP17AQ02040 695 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms