RNA–Protein interactions for RNA: ENST00000379066.5

PRKD3-202, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRKD3, Length 6,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-202ENST00000379066 PUS7Q96PZ0 661 aaKnown RBP4.81□□□□□ -1.64
PRKD3-202ENST00000379066 STAC3Q96MF2 364 aa4.8□□□□□ -1.64
PRKD3-202ENST00000379066 PRDM16Q9HAZ2 1276 aa4.8□□□□□ -1.64
PRKD3-202ENST00000379066 ZNF316A6NFI3 1004 aaPredicted RBP4.8□□□□□ -1.64
PRKD3-202ENST00000379066 FOXD4L5Q5VV16 416 aaPredicted RBP4.8□□□□□ -1.64
PRKD3-202ENST00000379066 FOXD4L4Q8WXT5 416 aaPredicted RBP4.8□□□□□ -1.64
PRKD3-202ENST00000379066 KDM4AO75164 1064 aa4.79□□□□□ -1.64
PRKD3-202ENST00000379066 FKBP8Q14318 412 aa4.79□□□□□ -1.64
PRKD3-202ENST00000379066 E9PSI1 815 aa4.79□□□□□ -1.64
PRKD3-202ENST00000379066 RNF216Q9NWF9 866 aaPredicted RBP4.78□□□□□ -1.64
PRKD3-202ENST00000379066 ZNF692Q9BU19 519 aaPredicted RBP4.78□□□□□ -1.64
PRKD3-202ENST00000379066 LMOD2Q6P5Q4 547 aa4.78□□□□□ -1.64
PRKD3-202ENST00000379066 NECTIN2Q92692 538 aa4.77□□□□□ -1.65
PRKD3-202ENST00000379066 RRP9O43818 475 aaKnown RBP4.77□□□□□ -1.65
PRKD3-202ENST00000379066 IRX3P78415 501 aaPredicted RBP4.77□□□□□ -1.65
PRKD3-202ENST00000379066 CC2D2AQ9P2K1 1620 aa4.77□□□□□ -1.65
PRKD3-202ENST00000379066 ANAPC15P60006 121 aa4.76□□□□□ -1.65
PRKD3-202ENST00000379066 GPATCH11Q8N954 259 aa4.76□□□□□ -1.65
PRKD3-202ENST00000379066 HDAC5Q9UQL6 1122 aa4.76□□□□□ -1.65
PRKD3-202ENST00000379066 PIP4K2BP78356 416 aa4.76□□□□□ -1.65
PRKD3-202ENST00000379066 DNAJC5BQ9UF47 199 aa4.76□□□□□ -1.65
PRKD3-202ENST00000379066 RAD21O60216 631 aa4.75□□□□□ -1.65
PRKD3-202ENST00000379066 FAM69CQ0P6D2 419 aa4.75□□□□□ -1.65
PRKD3-202ENST00000379066 ZNF830Q96NB3 372 aaPredicted RBP4.75□□□□□ -1.65
PRKD3-202ENST00000379066 MPNDQ8N594 471 aa4.75□□□□□ -1.65
PRKD3-202ENST00000379066 MYCNP04198 464 aaPredicted RBP4.75□□□□□ -1.65
PRKD3-202ENST00000379066 AEBP1Q8IUX7 1158 aa4.75□□□□□ -1.65
PRKD3-202ENST00000379066 NPHP1O15259 732 aa4.74□□□□□ -1.65
PRKD3-202ENST00000379066 CEP164Q9UPV0 1460 aa4.74□□□□□ -1.65
PRKD3-202ENST00000379066 CLGNO14967 610 aa4.73□□□□□ -1.65
PRKD3-202ENST00000379066 NEFMP07197 916 aa4.73□□□□□ -1.65
PRKD3-202ENST00000379066 FOXD4L6Q3SYB3 417 aaPredicted RBP4.73□□□□□ -1.65
PRKD3-202ENST00000379066 FOXD4L3Q6VB84 417 aaPredicted RBP4.73□□□□□ -1.65
PRKD3-202ENST00000379066 FAM177A1Q8N128 213 aaPredicted RBP4.73□□□□□ -1.65
PRKD3-202ENST00000379066 DNTTIP2Q5QJE6 756 aaKnown RBP4.73□□□□□ -1.65
PRKD3-202ENST00000379066 ANP32BQ92688 251 aaKnown RBP4.73□□□□□ -1.65
PRKD3-202ENST00000379066 CDCA8Q53HL2 280 aa4.73□□□□□ -1.65
PRKD3-202ENST00000379066 PIAS4Q8N2W9 510 aaPredicted RBP4.73□□□□□ -1.65
PRKD3-202ENST00000379066 KCTD17Q8N5Z5 321 aa4.72□□□□□ -1.65
PRKD3-202ENST00000379066 ZHX1Q9UKY1 873 aaPredicted RBP4.72□□□□□ -1.65
PRKD3-202ENST00000379066 CHRM1P11229 460 aaPredicted RBP4.72□□□□□ -1.65
PRKD3-202ENST00000379066 MCCP23508 829 aa4.72□□□□□ -1.65
PRKD3-202ENST00000379066 MTMR7Q9Y216 660 aa4.72□□□□□ -1.65
PRKD3-202ENST00000379066 CCDC27Q2M243 656 aa4.71□□□□□ -1.65
PRKD3-202ENST00000379066 SF3B2Q13435 895 aaKnown RBP4.71□□□□□ -1.66
PRKD3-202ENST00000379066 DNAJC2Q99543 621 aaKnown RBP4.7□□□□□ -1.66
PRKD3-202ENST00000379066 PLEKHD1A6NEE1 506 aa4.7□□□□□ -1.66
PRKD3-202ENST00000379066 GRIPAP1Q4V328 841 aa4.7□□□□□ -1.66
PRKD3-202ENST00000379066 CC2D1BQ5T0F9 858 aaKnown RBP4.69□□□□□ -1.66
PRKD3-202ENST00000379066 ZNF622Q969S3 477 aaKnown RBP eCLIP4.69□□□□□ -1.66
PRKD3-202ENST00000379066 TNNT2P45379 298 aaPredicted RBP4.69□□□□□ -1.66
PRKD3-202ENST00000379066 NOP58Q9Y2X3 529 aaKnown RBP4.69□□□□□ -1.66
PRKD3-202ENST00000379066 C11orf95C9JLR9 678 aaPredicted RBP4.69□□□□□ -1.66
PRKD3-202ENST00000379066 CALD1Q05682 793 aaKnown RBP4.69□□□□□ -1.66
PRKD3-202ENST00000379066 RGS22Q8NE09 1264 aa4.69□□□□□ -1.66
PRKD3-202ENST00000379066 ZBTB22O15209 634 aa4.68□□□□□ -1.66
PRKD3-202ENST00000379066 PRDM4Q9UKN5 801 aa4.67□□□□□ -1.66
PRKD3-202ENST00000379066 ZCCHC6Q5VYS8 1495 aaKnown RBP4.67□□□□□ -1.66
PRKD3-202ENST00000379066 ZBTB12Q9Y330 459 aaPredicted RBP4.67□□□□□ -1.66
PRKD3-202ENST00000379066 FANCIQ9NVI1 1328 aa4.67□□□□□ -1.66
PRKD3-202ENST00000379066 LAS1LQ9Y4W2 734 aaKnown RBP4.66□□□□□ -1.66
PRKD3-202ENST00000379066 SETQ01105 290 aaPredicted RBP4.66□□□□□ -1.66
PRKD3-202ENST00000379066 RGL3Q3MIN7 710 aa4.66□□□□□ -1.66
PRKD3-202ENST00000379066 CHMP4CQ96CF2 233 aa4.66□□□□□ -1.66
PRKD3-202ENST00000379066 ARMCX6Q7L4S7 300 aa4.65□□□□□ -1.66
PRKD3-202ENST00000379066 AXDND1Q5T1B0 1012 aaPredicted RBP4.65□□□□□ -1.66
PRKD3-202ENST00000379066 PHF14O94880 888 aa4.65□□□□□ -1.67
PRKD3-202ENST00000379066 SLC52A1Q9NWF4 448 aa4.65□□□□□ -1.67
PRKD3-202ENST00000379066 CARMIL2Q6F5E8 1435 aa4.65□□□□□ -1.67
PRKD3-202ENST00000379066 NUTM2BA6NNL0 878 aaPredicted RBP4.64□□□□□ -1.67
PRKD3-202ENST00000379066 NUTM2EB1AL46 878 aaPredicted RBP4.64□□□□□ -1.67
PRKD3-202ENST00000379066 ARID4AP29374 1257 aaPredicted RBP4.64□□□□□ -1.67
PRKD3-202ENST00000379066 NUTM2AQ8IVF1 878 aaPredicted RBP4.64□□□□□ -1.67
PRKD3-202ENST00000379066 C1orf115Q9H7X2 142 aa4.64□□□□□ -1.67
PRKD3-202ENST00000379066 HDGFP51858 240 aaKnown RBP4.64□□□□□ -1.67
PRKD3-202ENST00000379066 FAM43AQ8N2R8 423 aa4.64□□□□□ -1.67
PRKD3-202ENST00000379066 NGEFQ8N5V2 710 aa4.64□□□□□ -1.67
PRKD3-202ENST00000379066 EID1Q9Y6B2 187 aa4.64□□□□□ -1.67
PRKD3-202ENST00000379066 SOGA1O94964 1423 aa4.64□□□□□ -1.67
PRKD3-202ENST00000379066 TSPY4P0CV99 314 aa4.64□□□□□ -1.67
PRKD3-202ENST00000379066 TSPY10P0CW01 314 aa4.64□□□□□ -1.67
PRKD3-202ENST00000379066 GGT6Q6P531 493 aa4.64□□□□□ -1.67
PRKD3-202ENST00000379066 PIK3R5Q8WYR1 880 aa4.64□□□□□ -1.67
PRKD3-202ENST00000379066 TMEM51Q9NW97 253 aa4.63□□□□□ -1.67
PRKD3-202ENST00000379066 POLD1P28340 1107 aa4.63□□□□□ -1.67
PRKD3-202ENST00000379066 MRC2Q9UBG0 1479 aa4.63□□□□□ -1.67
PRKD3-202ENST00000379066 PPP1R1BQ9UD71 204 aaPredicted RBP4.63□□□□□ -1.67
PRKD3-202ENST00000379066 PNNQ9H307 717 aaKnown RBP4.63□□□□□ -1.67
PRKD3-202ENST00000379066 ZBTB9Q96C00 473 aa4.62□□□□□ -1.67
PRKD3-202ENST00000379066 SEMA3FQ13275 785 aa4.62□□□□□ -1.67
PRKD3-202ENST00000379066 TMTC2Q8N394 836 aa4.62□□□□□ -1.67
PRKD3-202ENST00000379066 CC2D2BQ6DHV5 1058 aa4.62□□□□□ -1.67
PRKD3-202ENST00000379066 CHIC2Q9UKJ5 165 aa4.62□□□□□ -1.67
PRKD3-202ENST00000379066 FANCD2Q9BXW9 1451 aa4.62□□□□□ -1.67
PRKD3-202ENST00000379066 PAK3O75914 559 aaPredicted RBP4.61□□□□□ -1.67
PRKD3-202ENST00000379066 NUTM2DQ5VT03 806 aaPredicted RBP4.61□□□□□ -1.67
PRKD3-202ENST00000379066 MIER1Q8N108 512 aa4.61□□□□□ -1.67
PRKD3-202ENST00000379066 NOL8Q76FK4 1167 aaKnown RBP4.61□□□□□ -1.67
PRKD3-202ENST00000379066 TDRD9Q8NDG6 1382 aaKnown RBP4.61□□□□□ -1.67
PRKD3-202ENST00000379066 ZBTB47Q9UFB7 747 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms