RNA–Protein interactions for RNA: ENST00000376895.2

SSX3-203, Transcript of SSX family member 3, humanhuman

TSL 5

Gene SSX3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-203ENST00000376895 TRIM35Q9UPQ4 493 aa10.65□□□□□ -0.7
SSX3-203ENST00000376895 ZMYND10O75800 440 aa10.64□□□□□ -0.71
SSX3-203ENST00000376895 CCDC180Q9P1Z9 1646 aa10.6□□□□□ -0.71
SSX3-203ENST00000376895 GPIHBP1Q8IV16 184 aa10.6□□□□□ -0.71
SSX3-203ENST00000376895 MICALL2Q8IY33 904 aa10.6□□□□□ -0.71
SSX3-203ENST00000376895 TMC2Q8TDI7 906 aa10.59□□□□□ -0.71
SSX3-203ENST00000376895 GALR2O43603 387 aaPredicted RBP10.58□□□□□ -0.72
SSX3-203ENST00000376895 CLCN6P51797 869 aa10.58□□□□□ -0.72
SSX3-203ENST00000376895 BARGINQ6ZT62 677 aa10.58□□□□□ -0.72
SSX3-203ENST00000376895 SPDYE16A6NNV3 312 aaPredicted RBP10.57□□□□□ -0.72
SSX3-203ENST00000376895 DPYSL4O14531 572 aa10.57□□□□□ -0.72
SSX3-203ENST00000376895 MLLT3P42568 568 aaPredicted RBP10.57□□□□□ -0.72
SSX3-203ENST00000376895 DSG2Q14126 1118 aa10.57□□□□□ -0.72
SSX3-203ENST00000376895 PDIA6Q15084 440 aa10.57□□□□□ -0.72
SSX3-203ENST00000376895 EMILIN3Q9NT22 766 aa10.56□□□□□ -0.72
SSX3-203ENST00000376895 FOXK1P85037 733 aa10.55□□□□□ -0.72
SSX3-203ENST00000376895 RBM26Q5T8P6 1007 aaKnown RBP10.55□□□□□ -0.72
SSX3-203ENST00000376895 PDCD7Q8N8D1 485 aaKnown RBP10.55□□□□□ -0.72
SSX3-203ENST00000376895 DPY19L2Q6NUT2 758 aa10.54□□□□□ -0.72
SSX3-203ENST00000376895 G3V3G9 751 aa10.53□□□□□ -0.72
SSX3-203ENST00000376895 C14orf37Q86TY3 774 aa10.53□□□□□ -0.72
SSX3-203ENST00000376895 AK7Q96M32 723 aa10.52□□□□□ -0.73
SSX3-203ENST00000376895 IER5LQ5T953 404 aa10.51□□□□□ -0.73
SSX3-203ENST00000376895 ATN1P54259 1190 aaPredicted RBP10.5□□□□□ -0.73
SSX3-203ENST00000376895 IRX5P78411 483 aaPredicted RBP10.5□□□□□ -0.73
SSX3-203ENST00000376895 PLPP6Q8IY26 295 aa10.49□□□□□ -0.73
SSX3-203ENST00000376895 KRI1Q8N9T8 703 aaKnown RBP10.49□□□□□ -0.73
SSX3-203ENST00000376895 BOLA1Q9Y3E2 137 aa10.49□□□□□ -0.73
SSX3-203ENST00000376895 HAX1O00165 279 aa10.48□□□□□ -0.73
SSX3-203ENST00000376895 TMEM121BQ9BXQ6 578 aaPredicted RBP10.48□□□□□ -0.73
SSX3-203ENST00000376895 OCEL1Q9H607 264 aa10.48□□□□□ -0.73
SSX3-203ENST00000376895 DAXXQ9UER7 740 aaPredicted RBP10.47□□□□□ -0.73
SSX3-203ENST00000376895 C2orf72A6NCS6 295 aa10.46□□□□□ -0.73
SSX3-203ENST00000376895 ATMINO43313 823 aaPredicted RBP10.46□□□□□ -0.73
SSX3-203ENST00000376895 PLCG2P16885 1265 aa10.46□□□□□ -0.73
SSX3-203ENST00000376895 ASTLQ6HA08 431 aaPredicted RBP10.46□□□□□ -0.73
SSX3-203ENST00000376895 KIF3CO14782 793 aa10.44□□□□□ -0.74
SSX3-203ENST00000376895 MAP3K9P80192 1104 aa10.43□□□□□ -0.74
SSX3-203ENST00000376895 L3MBTL3Q96JM7 780 aaPredicted RBP10.42□□□□□ -0.74
SSX3-203ENST00000376895 GPBP1L1Q9HC44 474 aaPredicted RBP10.41□□□□□ -0.74
SSX3-203ENST00000376895 GRXCR2A6NFK2 248 aa10.4□□□□□ -0.74
SSX3-203ENST00000376895 GPR37O15354 613 aa10.4□□□□□ -0.74
SSX3-203ENST00000376895 TRIM66O15016 1216 aa10.39□□□□□ -0.75
SSX3-203ENST00000376895 EVX2Q03828 476 aa10.38□□□□□ -0.75
SSX3-203ENST00000376895 PDE4DQ08499 809 aa10.38□□□□□ -0.75
SSX3-203ENST00000376895 UPF1Q92900 1129 aaKnown RBP eCLIP10.38□□□□□ -0.75
SSX3-203ENST00000376895 KDM4CQ9H3R0 1056 aa10.38□□□□□ -0.75
SSX3-203ENST00000376895 NUTM2FA1L443 756 aa10.36□□□□□ -0.75
SSX3-203ENST00000376895 ZNF316A6NFI3 1004 aaPredicted RBP10.35□□□□□ -0.75
SSX3-203ENST00000376895 SEC24BO95487 1268 aa10.35□□□□□ -0.75
SSX3-203ENST00000376895 MINK1Q8N4C8 1332 aaPredicted RBP10.34□□□□□ -0.75
SSX3-203ENST00000376895 MAP2K5Q13163 448 aa10.34□□□□□ -0.75
SSX3-203ENST00000376895 OXER1Q8TDS5 423 aa10.34□□□□□ -0.75
SSX3-203ENST00000376895 TBC1D12O60347 775 aa10.33□□□□□ -0.76
SSX3-203ENST00000376895 PTGER2P43116 358 aa10.33□□□□□ -0.76
SSX3-203ENST00000376895 TMEM92Q6UXU6 159 aa10.32□□□□□ -0.76
SSX3-203ENST00000376895 CCDC102AQ96A19 550 aa10.32□□□□□ -0.76
SSX3-203ENST00000376895 IL27Q8NEV9 243 aa10.31□□□□□ -0.76
SSX3-203ENST00000376895 ARXQ96QS3 562 aa10.31□□□□□ -0.76
SSX3-203ENST00000376895 GNPATO15228 680 aa10.3□□□□□ -0.76
SSX3-203ENST00000376895 FCHSD2O94868 740 aa10.3□□□□□ -0.76
SSX3-203ENST00000376895 OSBPP22059 807 aa10.3□□□□□ -0.76
SSX3-203ENST00000376895 HIC1Q14526 733 aa10.3□□□□□ -0.76
SSX3-203ENST00000376895 DDX12PQ92771 950 aa10.3□□□□□ -0.76
SSX3-203ENST00000376895 DCBLD2Q96PD2 775 aa10.28□□□□□ -0.76
SSX3-203ENST00000376895 EVI5O60447 810 aa10.27□□□□□ -0.77
SSX3-203ENST00000376895 GABBR2O75899 941 aa10.27□□□□□ -0.77
SSX3-203ENST00000376895 C3orf67Q6ZVT6 689 aa10.27□□□□□ -0.77
SSX3-203ENST00000376895 SLC39A7Q92504 469 aa10.27□□□□□ -0.77
SSX3-203ENST00000376895 ABCC9O60706 1549 aa10.27□□□□□ -0.77
SSX3-203ENST00000376895 IRF6O14896 467 aa10.26□□□□□ -0.77
SSX3-203ENST00000376895 AMHR2Q16671 573 aa10.26□□□□□ -0.77
SSX3-203ENST00000376895 COLQQ9Y215 455 aaPredicted RBP10.26□□□□□ -0.77
SSX3-203ENST00000376895 DDRGK1Q96HY6 314 aa10.25□□□□□ -0.77
SSX3-203ENST00000376895 PARP9Q8IXQ6 854 aa10.23□□□□□ -0.77
SSX3-203ENST00000376895 PELP1Q8IZL8 1130 aaKnown RBP10.23□□□□□ -0.77
SSX3-203ENST00000376895 PTCD2Q8WV60 388 aaKnown RBP10.23□□□□□ -0.77
SSX3-203ENST00000376895 PTGDRQ13258 359 aa10.22□□□□□ -0.77
SSX3-203ENST00000376895 FAM117AQ9C073 453 aa10.22□□□□□ -0.77
SSX3-203ENST00000376895 C7P10643 843 aa10.21□□□□□ -0.77
SSX3-203ENST00000376895 FECHP22830 423 aa10.2□□□□□ -0.78
SSX3-203ENST00000376895 TTLL12Q14166 644 aaPredicted RBP10.2□□□□□ -0.78
SSX3-203ENST00000376895 SLC34A2O95436 690 aa10.19□□□□□ -0.78
SSX3-203ENST00000376895 PRIM1P49642 420 aaKnown RBP10.19□□□□□ -0.78
SSX3-203ENST00000376895 METRNQ9UJH8 293 aa10.19□□□□□ -0.78
SSX3-203ENST00000376895 POTEFA5A3E0 1075 aa10.17□□□□□ -0.78
SSX3-203ENST00000376895 EN1Q05925 392 aaPredicted RBP10.17□□□□□ -0.78
SSX3-203ENST00000376895 HOMEZQ8IX15 550 aa10.17□□□□□ -0.78
SSX3-203ENST00000376895 EPAS1Q99814 870 aa10.17□□□□□ -0.78
SSX3-203ENST00000376895 PLEKHG3A1L390 1219 aa10.16□□□□□ -0.78
SSX3-203ENST00000376895 SUPT5HO00267 1087 aaKnown RBP10.16□□□□□ -0.78
SSX3-203ENST00000376895 PHF14O94880 888 aa10.16□□□□□ -0.78
SSX3-203ENST00000376895 ANO8Q9HCE9 1232 aaPredicted RBP10.16□□□□□ -0.78
SSX3-203ENST00000376895 MAP3K7O43318 606 aa10.15□□□□□ -0.78
SSX3-203ENST00000376895 GIGYF2Q6Y7W6 1299 aaKnown RBP10.14□□□□□ -0.79
SSX3-203ENST00000376895 CDHR5Q9HBB8 845 aa10.14□□□□□ -0.79
SSX3-203ENST00000376895 ZCCHC6Q5VYS8 1495 aaKnown RBP10.11□□□□□ -0.79
SSX3-203ENST00000376895 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.11□□□□□ -0.79
SSX3-203ENST00000376895 SLAIN1Q8ND83 568 aa10.1□□□□□ -0.79
SSX3-203ENST00000376895 ZMYND15Q9H091 742 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms