RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 IRX6P78412 446 aaPredicted RBP8.29□□□□□ -1.08
UBR4-204ENST00000375254 PATL2C9JE40 543 aaKnown RBP8.29□□□□□ -1.08
UBR4-204ENST00000375254 AK7Q96M32 723 aa8.29□□□□□ -1.08
UBR4-204ENST00000375254 RWDD1Q9H446 243 aaPredicted RBP8.28□□□□□ -1.08
UBR4-204ENST00000375254 RBM28Q9NW13 759 aaKnown RBP8.28□□□□□ -1.08
UBR4-204ENST00000375254 PDE3BQ13370 1112 aa8.27□□□□□ -1.09
UBR4-204ENST00000375254 ERCC4Q92889 916 aaPredicted RBP8.27□□□□□ -1.09
UBR4-204ENST00000375254 GZF1Q9H116 711 aaPredicted RBP8.27□□□□□ -1.09
UBR4-204ENST00000375254 PDIA4P13667 645 aaKnown RBP8.27□□□□□ -1.09
UBR4-204ENST00000375254 CC2D1BQ5T0F9 858 aaKnown RBP8.27□□□□□ -1.09
UBR4-204ENST00000375254 HSP90B2PQ58FF3 399 aa8.27□□□□□ -1.09
UBR4-204ENST00000375254 NOC3LQ8WTT2 800 aaKnown RBP8.27□□□□□ -1.09
UBR4-204ENST00000375254 ATP6V1DQ9Y5K8 247 aa8.27□□□□□ -1.09
UBR4-204ENST00000375254 CALCOCO1Q9P1Z2 691 aa8.26□□□□□ -1.09
UBR4-204ENST00000375254 CDR1P51861 262 aa8.26□□□□□ -1.09
UBR4-204ENST00000375254 CTR9Q6PD62 1173 aa8.26□□□□□ -1.09
UBR4-204ENST00000375254 DNAJC2Q99543 621 aaKnown RBP8.25□□□□□ -1.09
UBR4-204ENST00000375254 CCDC39Q9UFE4 941 aa8.25□□□□□ -1.09
UBR4-204ENST00000375254 FTSJ3Q8IY81 847 aaKnown RBP8.25□□□□□ -1.09
UBR4-204ENST00000375254 LETM1O95202 739 aaPredicted RBP8.24□□□□□ -1.09
UBR4-204ENST00000375254 SALL2Q9Y467 1007 aaPredicted RBP8.24□□□□□ -1.09
UBR4-204ENST00000375254 IPO8O15397 1037 aaKnown RBP8.24□□□□□ -1.09
UBR4-204ENST00000375254 KIF3AQ9Y496 699 aa8.24□□□□□ -1.09
UBR4-204ENST00000375254 HAP1P54257 671 aaPredicted RBP8.24□□□□□ -1.09
UBR4-204ENST00000375254 CCDC191Q8NCU4 936 aa8.24□□□□□ -1.09
UBR4-204ENST00000375254 DCTN1Q14203 1278 aa8.24□□□□□ -1.09
UBR4-204ENST00000375254 MNS1Q8NEH6 495 aa8.23□□□□□ -1.09
UBR4-204ENST00000375254 CHMP5Q9NZZ3 219 aa8.22□□□□□ -1.09
UBR4-204ENST00000375254 DYDC1Q8WWB3 177 aa8.22□□□□□ -1.09
UBR4-204ENST00000375254 GTPBP4Q9BZE4 634 aaKnown RBP8.22□□□□□ -1.09
UBR4-204ENST00000375254 TPM1P09493 284 aa8.22□□□□□ -1.09
UBR4-204ENST00000375254 AAMPQ13685 434 aa8.22□□□□□ -1.09
UBR4-204ENST00000375254 PMFBP1Q8TBY8 1022 aa8.22□□□□□ -1.09
UBR4-204ENST00000375254 PAIP2Q9BPZ3 127 aaKnown RBP8.22□□□□□ -1.09
UBR4-204ENST00000375254 LEKR1Q6ZMV7 388 aa8.21□□□□□ -1.09
UBR4-204ENST00000375254 IRX3P78415 501 aaPredicted RBP8.21□□□□□ -1.09
UBR4-204ENST00000375254 FAM161AQ3B820 660 aa8.21□□□□□ -1.09
UBR4-204ENST00000375254 GOLGA6L10A6NI86 522 aa8.21□□□□□ -1.09
UBR4-204ENST00000375254 TSR1Q2NL82 804 aaKnown RBP8.21□□□□□ -1.1
UBR4-204ENST00000375254 CCP110O43303 1012 aa8.21□□□□□ -1.1
UBR4-204ENST00000375254 CAGE1Q8TC20 777 aa8.21□□□□□ -1.1
UBR4-204ENST00000375254 RCAN3Q9UKA8 241 aa8.2□□□□□ -1.1
UBR4-204ENST00000375254 CCDC173Q0VFZ6 552 aa8.2□□□□□ -1.1
UBR4-204ENST00000375254 BBXQ8WY36 941 aaPredicted RBP8.2□□□□□ -1.1
UBR4-204ENST00000375254 MCM5P33992 734 aa8.2□□□□□ -1.1
UBR4-204ENST00000375254 INCENPQ9NQS7 918 aa8.2□□□□□ -1.1
UBR4-204ENST00000375254 PDE4AP27815 886 aa8.2□□□□□ -1.1
UBR4-204ENST00000375254 C14orf37Q86TY3 774 aa8.19□□□□□ -1.1
UBR4-204ENST00000375254 DDX11Q96FC9 970 aa8.19□□□□□ -1.1
UBR4-204ENST00000375254 POLR3GO15318 223 aaPredicted RBP8.18□□□□□ -1.1
UBR4-204ENST00000375254 SETSIPP0DME0 302 aa8.18□□□□□ -1.1
UBR4-204ENST00000375254 NUCB2P80303 420 aa8.18□□□□□ -1.1
UBR4-204ENST00000375254 TIGD1Q96MW7 591 aa8.18□□□□□ -1.1
UBR4-204ENST00000375254 GOLGA6L7A0A1B0GV03 622 aa8.18□□□□□ -1.1
UBR4-204ENST00000375254 ST18O60284 1047 aa8.18□□□□□ -1.1
UBR4-204ENST00000375254 ZRSR2Q15696 482 aaKnown RBP8.18□□□□□ -1.1
UBR4-204ENST00000375254 RGS3P49796 1198 aa8.18□□□□□ -1.1
UBR4-204ENST00000375254 KIF16BQ96L93 1317 aa8.18□□□□□ -1.1
UBR4-204ENST00000375254 CFAP53Q96M91 514 aa8.18□□□□□ -1.1
UBR4-204ENST00000375254 NFKBIBQ15653 356 aa8.17□□□□□ -1.1
UBR4-204ENST00000375254 CENPQQ7L2Z9 268 aaPredicted RBP8.17□□□□□ -1.1
UBR4-204ENST00000375254 DDX49Q9Y6V7 483 aaKnown RBP8.17□□□□□ -1.1
UBR4-204ENST00000375254 CHMP4AQ9BY43 222 aa8.17□□□□□ -1.1
UBR4-204ENST00000375254 RNF20Q5VTR2 975 aa8.17□□□□□ -1.1
UBR4-204ENST00000375254 KIAA1211Q6ZU35 1233 aa8.17□□□□□ -1.1
UBR4-204ENST00000375254 KNSTRNQ9Y448 316 aa8.17□□□□□ -1.1
UBR4-204ENST00000375254 H0YHG0 523 aa8.16□□□□□ -1.1
UBR4-204ENST00000375254 MAPK8IP3Q9UPT6 1336 aa8.16□□□□□ -1.1
UBR4-204ENST00000375254 RALBP1Q15311 655 aa8.16□□□□□ -1.1
UBR4-204ENST00000375254 BCCIPQ9P287 314 aaKnown RBP eCLIP8.16□□□□□ -1.1
UBR4-204ENST00000375254 ESPNB1AK53 854 aa8.16□□□□□ -1.1
UBR4-204ENST00000375254 NASPP49321 788 aaPredicted RBP8.16□□□□□ -1.1
UBR4-204ENST00000375254 GOLGA6L19H0YKK7 550 aa8.15□□□□□ -1.1
UBR4-204ENST00000375254 MYO15BQ96JP2 1530 aa8.15□□□□□ -1.1
UBR4-204ENST00000375254 NEXNQ0ZGT2 675 aa8.15□□□□□ -1.1
UBR4-204ENST00000375254 NUDCQ9Y266 331 aa8.15□□□□□ -1.11
UBR4-204ENST00000375254 NGEFQ8N5V2 710 aa8.15□□□□□ -1.11
UBR4-204ENST00000375254 R3HCC1Q9Y3T6 440 aaKnown RBP8.15□□□□□ -1.11
UBR4-204ENST00000375254 DYNC1I1O14576 645 aa8.14□□□□□ -1.11
UBR4-204ENST00000375254 FGD1P98174 961 aa8.14□□□□□ -1.11
UBR4-204ENST00000375254 KIF20AO95235 890 aa8.14□□□□□ -1.11
UBR4-204ENST00000375254 GIMAP7Q8NHV1 300 aa8.14□□□□□ -1.11
UBR4-204ENST00000375254 HMGB1P1B2RPK0 211 aaPredicted RBP8.13□□□□□ -1.11
UBR4-204ENST00000375254 HDAC5Q9UQL6 1122 aa8.13□□□□□ -1.11
UBR4-204ENST00000375254 GTF2A1P52655 376 aaPredicted RBP8.13□□□□□ -1.11
UBR4-204ENST00000375254 ARID3AQ99856 593 aa8.13□□□□□ -1.11
UBR4-204ENST00000375254 TTLL5Q6EMB2 1281 aa8.13□□□□□ -1.11
UBR4-204ENST00000375254 FRAT1Q92837 279 aaPredicted RBP8.13□□□□□ -1.11
UBR4-204ENST00000375254 SLKQ9H2G2 1235 aaPredicted RBP8.12□□□□□ -1.11
UBR4-204ENST00000375254 CHMP3Q9Y3E7 222 aa8.12□□□□□ -1.11
UBR4-204ENST00000375254 BRD2P25440 801 aaKnown RBP8.12□□□□□ -1.11
UBR4-204ENST00000375254 NAT10Q9H0A0 1025 aaKnown RBP8.12□□□□□ -1.11
UBR4-204ENST00000375254 TRAK2O60296 914 aa8.11□□□□□ -1.11
UBR4-204ENST00000375254 KIAA0754O94854 1291 aa8.11□□□□□ -1.11
UBR4-204ENST00000375254 GOLGA6L10A0A0M3HER8 536 aa8.11□□□□□ -1.11
UBR4-204ENST00000375254 BECN2A8MW95 431 aa8.11□□□□□ -1.11
UBR4-204ENST00000375254 HOMER1Q86YM7 354 aa8.1□□□□□ -1.11
UBR4-204ENST00000375254 ZSCAN30Q86W11 494 aa8.1□□□□□ -1.11
UBR4-204ENST00000375254 RBM10P98175 930 aaKnown RBP8.1□□□□□ -1.11
UBR4-204ENST00000375254 CWC22Q9HCG8 908 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms