RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 PLEKHD1A6NEE1 506 aa26.44■■□□□ 1.82
HLA-DQB1-201ENST00000374943 CAMSAP2Q08AD1 1489 aa26.43■■□□□ 1.82
HLA-DQB1-201ENST00000374943 CYB5RLQ6IPT4 315 aa26.41■■□□□ 1.82
HLA-DQB1-201ENST00000374943 ADGBQ8N7X0 1667 aa26.41■■□□□ 1.82
HLA-DQB1-201ENST00000374943 ROCK1Q13464 1354 aa26.41■■□□□ 1.82
HLA-DQB1-201ENST00000374943 ABCC5O15440 1437 aa26.39■■□□□ 1.82
HLA-DQB1-201ENST00000374943 UHRF1BP1LA0JNW5 1464 aa26.39■■□□□ 1.81
HLA-DQB1-201ENST00000374943 PREX2Q70Z35 1606 aa26.34■■□□□ 1.81
HLA-DQB1-201ENST00000374943 CFDP1Q9UEE9 299 aaPredicted RBP26.34■■□□□ 1.81
HLA-DQB1-201ENST00000374943 ZNF316A6NFI3 1004 aaPredicted RBP26.33■■□□□ 1.81
HLA-DQB1-201ENST00000374943 KDM6BO15054 1643 aa26.33■■□□□ 1.8
HLA-DQB1-201ENST00000374943 ZCCHC11Q5TAX3 1644 aaKnown RBP26.32■■□□□ 1.8
HLA-DQB1-201ENST00000374943 CDC42BPBQ9Y5S2 1711 aa26.31■■□□□ 1.8
HLA-DQB1-201ENST00000374943 ZNF644Q9H582 1327 aaPredicted RBP26.31■■□□□ 1.8
HLA-DQB1-201ENST00000374943 ACIN1Q9UKV3 1341 aaKnown RBP26.3■■□□□ 1.8
HLA-DQB1-201ENST00000374943 ADGRL2O95490 1459 aa26.29■■□□□ 1.8
HLA-DQB1-201ENST00000374943 KDM5BQ9UGL1 1544 aa26.28■■□□□ 1.8
HLA-DQB1-201ENST00000374943 CHIC2Q9UKJ5 165 aa26.28■■□□□ 1.8
HLA-DQB1-201ENST00000374943 RRP7BPQ9NSQ0 103 aa26.27■■□□□ 1.8
HLA-DQB1-201ENST00000374943 SHANK2Q9UPX8 1470 aa26.26■■□□□ 1.79
HLA-DQB1-201ENST00000374943 ARHGEF5Q12774 1597 aa26.26■■□□□ 1.79
HLA-DQB1-201ENST00000374943 MYO5CQ9NQX4 1742 aa26.25■■□□□ 1.79
HLA-DQB1-201ENST00000374943 TTC37Q6PGP7 1564 aa26.24■■□□□ 1.79
HLA-DQB1-201ENST00000374943 TIMELESSQ9UNS1 1208 aa26.24■■□□□ 1.79
HLA-DQB1-201ENST00000374943 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.23■■□□□ 1.79
HLA-DQB1-201ENST00000374943 TRHP20396 242 aaPredicted RBP26.22■■□□□ 1.79
HLA-DQB1-201ENST00000374943 SAMD9LQ8IVG5 1584 aa26.2■■□□□ 1.78
HLA-DQB1-201ENST00000374943 NCOA1Q15788 1441 aa26.18■■□□□ 1.78
HLA-DQB1-201ENST00000374943 DENND4BO75064 1496 aaPredicted RBP26.16■■□□□ 1.78
HLA-DQB1-201ENST00000374943 DIEXFQ68CQ4 756 aaKnown RBP26.15■■□□□ 1.78
HLA-DQB1-201ENST00000374943 ZNF777Q9ULD5 760 aaPredicted RBP26.15■■□□□ 1.78
HLA-DQB1-201ENST00000374943 SIN3AQ96ST3 1273 aa26.14■■□□□ 1.78
HLA-DQB1-201ENST00000374943 MBD5Q9P267 1494 aa26.12■■□□□ 1.77
HLA-DQB1-201ENST00000374943 ANKRD30AQ9BXX3 1397 aa26.12■■□□□ 1.77
HLA-DQB1-201ENST00000374943 C9orf84Q5VXU9 1444 aa26.11■■□□□ 1.77
HLA-DQB1-201ENST00000374943 ARHGAP5Q13017 1502 aa26.09■■□□□ 1.77
HLA-DQB1-201ENST00000374943 CCDC141Q6ZP82 1450 aa26.09■■□□□ 1.77
HLA-DQB1-201ENST00000374943 MAST1Q9Y2H9 1570 aa26.08■■□□□ 1.77
HLA-DQB1-201ENST00000374943 PLEKHH2Q8IVE3 1493 aa26.07■■□□□ 1.76
HLA-DQB1-201ENST00000374943 NEUROD1Q13562 356 aa26.06■■□□□ 1.76
HLA-DQB1-201ENST00000374943 TRIM52Q96A61 297 aa26.05■■□□□ 1.76
HLA-DQB1-201ENST00000374943 ARAP3Q8WWN8 1544 aa26.04■■□□□ 1.76
HLA-DQB1-201ENST00000374943 SYCP2Q9BX26 1530 aa26.04■■□□□ 1.76
HLA-DQB1-201ENST00000374943 RSPH4AQ5TD94 716 aa26.03■■□□□ 1.76
HLA-DQB1-201ENST00000374943 KIAA1107Q9UPP5 1409 aa26.03■■□□□ 1.76
HLA-DQB1-201ENST00000374943 MPHOSPH9Q99550 1183 aa26.03■■□□□ 1.76
HLA-DQB1-201ENST00000374943 PLCH2O75038 1416 aa26.02■■□□□ 1.76
HLA-DQB1-201ENST00000374943 TONSLQ96HA7 1378 aa26■■□□□ 1.75
HLA-DQB1-201ENST00000374943 PZPP20742 1482 aa26■■□□□ 1.75
HLA-DQB1-201ENST00000374943 WDR7Q9Y4E6 1490 aa26■■□□□ 1.75
HLA-DQB1-201ENST00000374943 ANKRD50Q9ULJ7 1429 aa26■■□□□ 1.75
HLA-DQB1-201ENST00000374943 TSPY4P0CV99 314 aa25.98■■□□□ 1.75
HLA-DQB1-201ENST00000374943 TSPY10P0CW01 314 aa25.98■■□□□ 1.75
HLA-DQB1-201ENST00000374943 KDM5DQ9BY66 1539 aa25.98■■□□□ 1.75
HLA-DQB1-201ENST00000374943 PLXNC1O60486 1568 aa25.97■■□□□ 1.75
HLA-DQB1-201ENST00000374943 PPP1R15AO75807 674 aaPredicted RBP25.97■■□□□ 1.75
HLA-DQB1-201ENST00000374943 ABCA9Q8IUA7 1624 aa25.96■■□□□ 1.75
HLA-DQB1-201ENST00000374943 HNRNPMP52272 730 aaKnown RBP eCLIP25.96■■□□□ 1.75
HLA-DQB1-201ENST00000374943 ABCC1P33527 1531 aa25.95■■□□□ 1.75
HLA-DQB1-201ENST00000374943 KIF15Q9NS87 1388 aa25.93■■□□□ 1.74
HLA-DQB1-201ENST00000374943 KCNH8Q96L42 1107 aa25.92■■□□□ 1.74
HLA-DQB1-201ENST00000374943 ANKRD30BQ9BXX2 1392 aa25.92■■□□□ 1.74
HLA-DQB1-201ENST00000374943 ARHGEF12Q9NZN5 1544 aa25.89■■□□□ 1.73
HLA-DQB1-201ENST00000374943 RPRD2Q5VT52 1461 aaKnown RBP25.88■■□□□ 1.73
HLA-DQB1-201ENST00000374943 EFCAB2Q5VUJ9 269 aa25.87■■□□□ 1.73
HLA-DQB1-201ENST00000374943 SLC4A1APQ9BWU0 796 aaKnown RBP25.87■■□□□ 1.73
HLA-DQB1-201ENST00000374943 UNC13BO14795 1591 aa25.86■■□□□ 1.73
HLA-DQB1-201ENST00000374943 ASXL2Q76L83 1435 aa25.85■■□□□ 1.73
HLA-DQB1-201ENST00000374943 DUOX2Q9NRD8 1548 aa25.8■■□□□ 1.72
HLA-DQB1-201ENST00000374943 TEX14Q8IWB6 1497 aa25.79■■□□□ 1.72
HLA-DQB1-201ENST00000374943 FOXD1Q16676 465 aa25.78■■□□□ 1.72
HLA-DQB1-201ENST00000374943 NUP155O75694 1391 aa25.76■■□□□ 1.71
HLA-DQB1-201ENST00000374943 FANCAO15360 1455 aa25.75■■□□□ 1.71
HLA-DQB1-201ENST00000374943 ERBINQ96RT1 1412 aa25.74■■□□□ 1.71
HLA-DQB1-201ENST00000374943 TRAPPC8Q9Y2L5 1435 aa25.74■■□□□ 1.71
HLA-DQB1-201ENST00000374943 IQGAP3Q86VI3 1631 aa25.74■■□□□ 1.71
HLA-DQB1-201ENST00000374943 RTEL1-TNFRSF6BF6WH68 1400 aa25.74■■□□□ 1.71
HLA-DQB1-201ENST00000374943 ZFYVE16Q7Z3T8 1539 aa25.74■■□□□ 1.71
HLA-DQB1-201ENST00000374943 FAM135AQ9P2D6 1515 aa25.74■■□□□ 1.71
HLA-DQB1-201ENST00000374943 MAGI2Q86UL8 1455 aa25.73■■□□□ 1.71
HLA-DQB1-201ENST00000374943 CFAP74Q9C0B2 1584 aa25.71■■□□□ 1.71
HLA-DQB1-201ENST00000374943 INO80Q9ULG1 1556 aaPredicted RBP25.71■■□□□ 1.71
HLA-DQB1-201ENST00000374943 PKD2Q13563 968 aa25.71■■□□□ 1.71
HLA-DQB1-201ENST00000374943 NPM1P06748 294 aaKnown RBP eCLIP25.7■■□□□ 1.7
HLA-DQB1-201ENST00000374943 MIER1Q8N108 512 aa25.67■■□□□ 1.7
HLA-DQB1-201ENST00000374943 L3MBTL2Q969R5 705 aa25.67■■□□□ 1.7
HLA-DQB1-201ENST00000374943 AEBP2Q6ZN18 517 aaPredicted RBP25.66■■□□□ 1.7
HLA-DQB1-201ENST00000374943 ADGRL1O94910 1474 aa25.65■■□□□ 1.7
HLA-DQB1-201ENST00000374943 ATP7AQ04656 1500 aa25.64■■□□□ 1.7
HLA-DQB1-201ENST00000374943 DEPDC5O75140 1603 aa25.62■■□□□ 1.69
HLA-DQB1-201ENST00000374943 SPAG9O60271 1321 aaKnown RBP25.61■■□□□ 1.69
HLA-DQB1-201ENST00000374943 EIF2AK4Q9P2K8 1649 aaKnown RBP25.59■■□□□ 1.69
HLA-DQB1-201ENST00000374943 SCAPERQ9BY12 1400 aa25.57■■□□□ 1.68
HLA-DQB1-201ENST00000374943 KIF13AQ9H1H9 1805 aa25.55■■□□□ 1.68
HLA-DQB1-201ENST00000374943 CD109Q6YHK3 1445 aa25.55■■□□□ 1.68
HLA-DQB1-201ENST00000374943 KIDINS220Q9ULH0 1771 aa25.55■■□□□ 1.68
HLA-DQB1-201ENST00000374943 AFAP1Q8N556 730 aa25.54■■□□□ 1.68
HLA-DQB1-201ENST00000374943 KDM5CP41229 1560 aa25.52■■□□□ 1.68
HLA-DQB1-201ENST00000374943 ZNF518AQ6AHZ1 1483 aa25.52■■□□□ 1.68
HLA-DQB1-201ENST00000374943 ATP10AO60312 1499 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms