RNA–Protein interactions for RNA: ENST00000374602.2

TCEA3-202, Transcript of transcription elongation factor A3, humanhuman

TSL 3

Gene TCEA3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-202ENST00000374602 PREX1Q8TCU6 1659 aa10.8□□□□□ -0.68
TCEA3-202ENST00000374602 CSRNP3Q8WYN3 585 aa10.79□□□□□ -0.68
TCEA3-202ENST00000374602 HECW1Q76N89 1606 aa10.78□□□□□ -0.68
TCEA3-202ENST00000374602 KIF14Q15058 1648 aa10.76□□□□□ -0.69
TCEA3-202ENST00000374602 RANGAP1P46060 587 aaPredicted RBP10.76□□□□□ -0.69
TCEA3-202ENST00000374602 SIGLEC1Q9BZZ2 1709 aa10.75□□□□□ -0.69
TCEA3-202ENST00000374602 C9orf84Q5VXU9 1444 aa10.75□□□□□ -0.69
TCEA3-202ENST00000374602 MSH5O43196 834 aa10.74□□□□□ -0.69
TCEA3-202ENST00000374602 SETD1BQ9UPS6 1966 aaKnown RBP10.74□□□□□ -0.69
TCEA3-202ENST00000374602 CDK13Q14004 1512 aaKnown RBP10.74□□□□□ -0.69
TCEA3-202ENST00000374602 YEATS2Q9ULM3 1422 aa10.73□□□□□ -0.69
TCEA3-202ENST00000374602 FMN1Q68DA7 1419 aa10.72□□□□□ -0.69
TCEA3-202ENST00000374602 ZNF518AQ6AHZ1 1483 aa10.72□□□□□ -0.69
TCEA3-202ENST00000374602 ARHGEF12Q9NZN5 1544 aa10.72□□□□□ -0.69
TCEA3-202ENST00000374602 CLIP1P30622 1438 aa10.71□□□□□ -0.69
TCEA3-202ENST00000374602 SCAPERQ9BY12 1400 aa10.71□□□□□ -0.69
TCEA3-202ENST00000374602 ARHGAP5Q13017 1502 aa10.7□□□□□ -0.7
TCEA3-202ENST00000374602 ATP10AO60312 1499 aa10.7□□□□□ -0.7
TCEA3-202ENST00000374602 PLCH2O75038 1416 aa10.7□□□□□ -0.7
TCEA3-202ENST00000374602 HSPA2P54652 639 aa10.7□□□□□ -0.7
TCEA3-202ENST00000374602 MLECQ14165 292 aa10.7□□□□□ -0.7
TCEA3-202ENST00000374602 CDK11AQ9UQ88 783 aaPredicted RBP10.7□□□□□ -0.7
TCEA3-202ENST00000374602 UHRF1BP1Q6BDS2 1440 aa10.69□□□□□ -0.7
TCEA3-202ENST00000374602 KDM5CP41229 1560 aa10.69□□□□□ -0.7
TCEA3-202ENST00000374602 REREQ9P2R6 1566 aa10.68□□□□□ -0.7
TCEA3-202ENST00000374602 EFCAB2Q5VUJ9 269 aa10.67□□□□□ -0.7
TCEA3-202ENST00000374602 CERKQ8TCT0 537 aa10.67□□□□□ -0.7
TCEA3-202ENST00000374602 MYT1LQ9UL68 1186 aa10.67□□□□□ -0.7
TCEA3-202ENST00000374602 DMRT2Q9Y5R5 561 aa10.67□□□□□ -0.7
TCEA3-202ENST00000374602 PREX2Q70Z35 1606 aa10.66□□□□□ -0.7
TCEA3-202ENST00000374602 DIP2CQ9Y2E4 1556 aa10.66□□□□□ -0.7
TCEA3-202ENST00000374602 ATP1B4Q9UN42 357 aaPredicted RBP10.66□□□□□ -0.7
TCEA3-202ENST00000374602 C3P01024 1663 aa10.66□□□□□ -0.7
TCEA3-202ENST00000374602 STRCQ7RTU9 1775 aa10.65□□□□□ -0.7
TCEA3-202ENST00000374602 ITSN2Q9NZM3 1697 aa10.65□□□□□ -0.7
TCEA3-202ENST00000374602 TROQ12816 1431 aaPredicted RBP10.65□□□□□ -0.7
TCEA3-202ENST00000374602 ABCA6Q8N139 1617 aa10.65□□□□□ -0.7
TCEA3-202ENST00000374602 CDC42BPBQ9Y5S2 1711 aa10.64□□□□□ -0.71
TCEA3-202ENST00000374602 ESF1Q9H501 851 aaKnown RBP10.64□□□□□ -0.71
TCEA3-202ENST00000374602 SPATA31D1Q6ZQQ2 1576 aa10.64□□□□□ -0.71
TCEA3-202ENST00000374602 LRRIQ1Q96JM4 1722 aa10.64□□□□□ -0.71
TCEA3-202ENST00000374602 CCDC18Q5T9S5 1454 aa10.63□□□□□ -0.71
TCEA3-202ENST00000374602 SUPT6HQ7KZ85 1726 aaKnown RBP10.63□□□□□ -0.71
TCEA3-202ENST00000374602 ABCC1P33527 1531 aa10.63□□□□□ -0.71
TCEA3-202ENST00000374602 UBTFP17480 764 aaKnown RBP10.62□□□□□ -0.71
TCEA3-202ENST00000374602 MROH2AA6NES4 1674 aa10.62□□□□□ -0.71
TCEA3-202ENST00000374602 AGLP35573 1532 aa10.61□□□□□ -0.71
TCEA3-202ENST00000374602 DISP3Q9P2K9 1392 aa10.61□□□□□ -0.71
TCEA3-202ENST00000374602 CDC42BPAQ5VT25 1732 aa10.61□□□□□ -0.71
TCEA3-202ENST00000374602 ARHGAP35Q9NRY4 1499 aa10.61□□□□□ -0.71
TCEA3-202ENST00000374602 MLH3Q9UHC1 1453 aa10.61□□□□□ -0.71
TCEA3-202ENST00000374602 CNTLNQ9NXG0 1405 aa10.6□□□□□ -0.71
TCEA3-202ENST00000374602 IQSEC2Q5JU85 1478 aa10.59□□□□□ -0.71
TCEA3-202ENST00000374602 PTPRTO14522 1441 aa10.58□□□□□ -0.72
TCEA3-202ENST00000374602 KIDINS220Q9ULH0 1771 aa10.58□□□□□ -0.72
TCEA3-202ENST00000374602 CEBPAP49715 358 aaPredicted RBP10.57□□□□□ -0.72
TCEA3-202ENST00000374602 ZNF142P52746 1687 aaPredicted RBP10.57□□□□□ -0.72
TCEA3-202ENST00000374602 PPP4R3CPQ6ZMV5 832 aa10.56□□□□□ -0.72
TCEA3-202ENST00000374602 TRAPPC8Q9Y2L5 1435 aa10.56□□□□□ -0.72
TCEA3-202ENST00000374602 AFAP1Q8N556 730 aa10.55□□□□□ -0.72
TCEA3-202ENST00000374602 FYCO1Q9BQS8 1478 aa10.55□□□□□ -0.72
TCEA3-202ENST00000374602 MYO3AQ8NEV4 1616 aa10.55□□□□□ -0.72
TCEA3-202ENST00000374602 NPATQ14207 1427 aa10.54□□□□□ -0.72
TCEA3-202ENST00000374602 NCOA1Q15788 1441 aa10.54□□□□□ -0.72
TCEA3-202ENST00000374602 EHMT2Q96KQ7 1210 aa10.54□□□□□ -0.72
TCEA3-202ENST00000374602 CAMSAP1Q5T5Y3 1602 aa10.54□□□□□ -0.72
TCEA3-202ENST00000374602 CLTCQ00610 1675 aaKnown RBP10.53□□□□□ -0.72
TCEA3-202ENST00000374602 SYCP2Q9BX26 1530 aa10.53□□□□□ -0.72
TCEA3-202ENST00000374602 SAMD9LQ8IVG5 1584 aa10.53□□□□□ -0.72
TCEA3-202ENST00000374602 CASKIN1Q8WXD9 1431 aa10.53□□□□□ -0.72
TCEA3-202ENST00000374602 ADGBQ8N7X0 1667 aa10.53□□□□□ -0.72
TCEA3-202ENST00000374602 SOCS7O14512 581 aa10.52□□□□□ -0.73
TCEA3-202ENST00000374602 PLEKHH2Q8IVE3 1493 aa10.52□□□□□ -0.73
TCEA3-202ENST00000374602 ATP7AQ04656 1500 aa10.52□□□□□ -0.73
TCEA3-202ENST00000374602 LTBP4Q8N2S1 1624 aa10.51□□□□□ -0.73
TCEA3-202ENST00000374602 INO80Q9ULG1 1556 aaPredicted RBP10.51□□□□□ -0.73
TCEA3-202ENST00000374602 PLXNC1O60486 1568 aa10.5□□□□□ -0.73
TCEA3-202ENST00000374602 CEP170BQ9Y4F5 1589 aaPredicted RBP10.5□□□□□ -0.73
TCEA3-202ENST00000374602 POLR1AO95602 1720 aaPredicted RBP10.5□□□□□ -0.73
TCEA3-202ENST00000374602 PLA2R1Q13018 1463 aa10.49□□□□□ -0.73
TCEA3-202ENST00000374602 SPAG9O60271 1321 aaKnown RBP10.48□□□□□ -0.73
TCEA3-202ENST00000374602 SCAF1Q9H7N4 1312 aaKnown RBP10.48□□□□□ -0.73
TCEA3-202ENST00000374602 ZNF777Q9ULD5 760 aaPredicted RBP10.47□□□□□ -0.73
TCEA3-202ENST00000374602 A2MP01023 1474 aa10.47□□□□□ -0.73
TCEA3-202ENST00000374602 KIAA1107Q9UPP5 1409 aa10.45□□□□□ -0.74
TCEA3-202ENST00000374602 ZMYM3Q14202 1370 aa10.45□□□□□ -0.74
TCEA3-202ENST00000374602 PKD2Q13563 968 aa10.45□□□□□ -0.74
TCEA3-202ENST00000374602 ILDR2Q71H61 639 aa10.45□□□□□ -0.74
TCEA3-202ENST00000374602 FAM135AQ9P2D6 1515 aa10.44□□□□□ -0.74
TCEA3-202ENST00000374602 GPATCH8Q9UKJ3 1502 aaKnown RBP10.44□□□□□ -0.74
TCEA3-202ENST00000374602 CCNB3Q8WWL7 1395 aa10.44□□□□□ -0.74
TCEA3-202ENST00000374602 KCNA4P22459 653 aa10.44□□□□□ -0.74
TCEA3-202ENST00000374602 EHBP1L1Q8N3D4 1523 aa10.43□□□□□ -0.74
TCEA3-202ENST00000374602 TCOF1Q13428 1488 aaKnown RBP10.43□□□□□ -0.74
TCEA3-202ENST00000374602 MTUS2Q5JR59 1369 aa10.43□□□□□ -0.74
TCEA3-202ENST00000374602 UBAP1LF5GYI3 381 aa10.42□□□□□ -0.74
TCEA3-202ENST00000374602 CFDP1Q9UEE9 299 aaPredicted RBP10.42□□□□□ -0.74
TCEA3-202ENST00000374602 A2ML1A8K2U0 1454 aa10.42□□□□□ -0.74
TCEA3-202ENST00000374602 DNMT1P26358 1616 aaKnown RBP10.41□□□□□ -0.74
TCEA3-202ENST00000374602 ZNF335Q9H4Z2 1342 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms