RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 RBM26Q5T8P6 1007 aaKnown RBP9.18□□□□□ -0.94
RNU6-1339P-201ENST00000363574 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.18□□□□□ -0.94
RNU6-1339P-201ENST00000363574 BMP2KQ9NSY1 1161 aaPredicted RBP9.16□□□□□ -0.94
RNU6-1339P-201ENST00000363574 GPIHBP1Q8IV16 184 aa9.15□□□□□ -0.94
RNU6-1339P-201ENST00000363574 EMILIN3Q9NT22 766 aa9.15□□□□□ -0.94
RNU6-1339P-201ENST00000363574 DPYSL4O14531 572 aa9.13□□□□□ -0.95
RNU6-1339P-201ENST00000363574 DSG2Q14126 1118 aa9.13□□□□□ -0.95
RNU6-1339P-201ENST00000363574 DPY19L2Q6NUT2 758 aa9.13□□□□□ -0.95
RNU6-1339P-201ENST00000363574 AK7Q96M32 723 aa9.13□□□□□ -0.95
RNU6-1339P-201ENST00000363574 PDIA6Q15084 440 aa9.12□□□□□ -0.95
RNU6-1339P-201ENST00000363574 TRIM35Q9UPQ4 493 aa9.12□□□□□ -0.95
RNU6-1339P-201ENST00000363574 SPDYE16A6NNV3 312 aaPredicted RBP9.11□□□□□ -0.95
RNU6-1339P-201ENST00000363574 MICALL2Q8IY33 904 aa9.11□□□□□ -0.95
RNU6-1339P-201ENST00000363574 FOXK1P85037 733 aa9.09□□□□□ -0.95
RNU6-1339P-201ENST00000363574 KRI1Q8N9T8 703 aaKnown RBP9.09□□□□□ -0.95
RNU6-1339P-201ENST00000363574 ARXQ96QS3 562 aa9.09□□□□□ -0.95
RNU6-1339P-201ENST00000363574 GALR2O43603 387 aaPredicted RBP9.08□□□□□ -0.96
RNU6-1339P-201ENST00000363574 PDCD7Q8N8D1 485 aaKnown RBP9.08□□□□□ -0.96
RNU6-1339P-201ENST00000363574 GPBP1L1Q9HC44 474 aaPredicted RBP9.08□□□□□ -0.96
RNU6-1339P-201ENST00000363574 TMC2Q8TDI7 906 aa9.07□□□□□ -0.96
RNU6-1339P-201ENST00000363574 GPR37O15354 613 aa9.05□□□□□ -0.96
RNU6-1339P-201ENST00000363574 TRIM66O15016 1216 aa9.04□□□□□ -0.96
RNU6-1339P-201ENST00000363574 PLPP6Q8IY26 295 aa9.04□□□□□ -0.96
RNU6-1339P-201ENST00000363574 TMEM121BQ9BXQ6 578 aaPredicted RBP9.04□□□□□ -0.96
RNU6-1339P-201ENST00000363574 KIF3CO14782 793 aa9.03□□□□□ -0.96
RNU6-1339P-201ENST00000363574 KDM4CQ9H3R0 1056 aa9.03□□□□□ -0.96
RNU6-1339P-201ENST00000363574 C2orf72A6NCS6 295 aa9.02□□□□□ -0.97
RNU6-1339P-201ENST00000363574 IRX5P78411 483 aaPredicted RBP9.02□□□□□ -0.97
RNU6-1339P-201ENST00000363574 PDE4DQ08499 809 aa9.02□□□□□ -0.97
RNU6-1339P-201ENST00000363574 ATN1P54259 1190 aaPredicted RBP9.01□□□□□ -0.97
RNU6-1339P-201ENST00000363574 IL27Q8NEV9 243 aa9.01□□□□□ -0.97
RNU6-1339P-201ENST00000363574 DAXXQ9UER7 740 aaPredicted RBP9.01□□□□□ -0.97
RNU6-1339P-201ENST00000363574 BOLA1Q9Y3E2 137 aa9.01□□□□□ -0.97
RNU6-1339P-201ENST00000363574 OCEL1Q9H607 264 aa8.99□□□□□ -0.97
RNU6-1339P-201ENST00000363574 GRXCR2A6NFK2 248 aa8.97□□□□□ -0.97
RNU6-1339P-201ENST00000363574 ATMINO43313 823 aaPredicted RBP8.97□□□□□ -0.97
RNU6-1339P-201ENST00000363574 CLCN6P51797 869 aa8.97□□□□□ -0.97
RNU6-1339P-201ENST00000363574 MAP3K9P80192 1104 aa8.97□□□□□ -0.97
RNU6-1339P-201ENST00000363574 IER5LQ5T953 404 aa8.97□□□□□ -0.97
RNU6-1339P-201ENST00000363574 ASTLQ6HA08 431 aaPredicted RBP8.96□□□□□ -0.98
RNU6-1339P-201ENST00000363574 SUPT5HO00267 1087 aaKnown RBP8.95□□□□□ -0.98
RNU6-1339P-201ENST00000363574 OSBPP22059 807 aa8.95□□□□□ -0.98
RNU6-1339P-201ENST00000363574 MINK1Q8N4C8 1332 aaPredicted RBP8.95□□□□□ -0.98
RNU6-1339P-201ENST00000363574 NUTM2FA1L443 756 aa8.94□□□□□ -0.98
RNU6-1339P-201ENST00000363574 G3V3G9 751 aa8.94□□□□□ -0.98
RNU6-1339P-201ENST00000363574 EVX2Q03828 476 aa8.94□□□□□ -0.98
RNU6-1339P-201ENST00000363574 MAP2K5Q13163 448 aa8.94□□□□□ -0.98
RNU6-1339P-201ENST00000363574 HOMEZQ8IX15 550 aa8.94□□□□□ -0.98
RNU6-1339P-201ENST00000363574 PTGER2P43116 358 aa8.93□□□□□ -0.98
RNU6-1339P-201ENST00000363574 TMEM92Q6UXU6 159 aa8.93□□□□□ -0.98
RNU6-1339P-201ENST00000363574 OXER1Q8TDS5 423 aa8.93□□□□□ -0.98
RNU6-1339P-201ENST00000363574 UPF1Q92900 1129 aaKnown RBP eCLIP8.93□□□□□ -0.98
RNU6-1339P-201ENST00000363574 CCDC102AQ96A19 550 aa8.93□□□□□ -0.98
RNU6-1339P-201ENST00000363574 FAM117AQ9C073 453 aa8.92□□□□□ -0.98
RNU6-1339P-201ENST00000363574 HAX1O00165 279 aa8.91□□□□□ -0.98
RNU6-1339P-201ENST00000363574 IRF6O14896 467 aa8.91□□□□□ -0.98
RNU6-1339P-201ENST00000363574 PLCG2P16885 1265 aa8.91□□□□□ -0.98
RNU6-1339P-201ENST00000363574 GNPATO15228 680 aa8.9□□□□□ -0.98
RNU6-1339P-201ENST00000363574 AMHR2Q16671 573 aa8.9□□□□□ -0.98
RNU6-1339P-201ENST00000363574 L3MBTL3Q96JM7 780 aaPredicted RBP8.9□□□□□ -0.98
RNU6-1339P-201ENST00000363574 HIC1Q14526 733 aa8.89□□□□□ -0.99
RNU6-1339P-201ENST00000363574 DDX12PQ92771 950 aa8.89□□□□□ -0.99
RNU6-1339P-201ENST00000363574 PLEKHG3A1L390 1219 aa8.88□□□□□ -0.99
RNU6-1339P-201ENST00000363574 FCHSD2O94868 740 aa8.88□□□□□ -0.99
RNU6-1339P-201ENST00000363574 FECHP22830 423 aa8.88□□□□□ -0.99
RNU6-1339P-201ENST00000363574 PRIM1P49642 420 aaKnown RBP8.88□□□□□ -0.99
RNU6-1339P-201ENST00000363574 PARP9Q8IXQ6 854 aa8.88□□□□□ -0.99
RNU6-1339P-201ENST00000363574 ZNF316A6NFI3 1004 aaPredicted RBP8.87□□□□□ -0.99
RNU6-1339P-201ENST00000363574 DDRGK1Q96HY6 314 aa8.86□□□□□ -0.99
RNU6-1339P-201ENST00000363574 TBC1D12O60347 775 aa8.85□□□□□ -0.99
RNU6-1339P-201ENST00000363574 EVI5O60447 810 aa8.85□□□□□ -0.99
RNU6-1339P-201ENST00000363574 ZMYND15Q9H091 742 aa8.85□□□□□ -0.99
RNU6-1339P-201ENST00000363574 COLQQ9Y215 455 aaPredicted RBP8.84□□□□□ -0.99
RNU6-1339P-201ENST00000363574 PTGDRQ13258 359 aa8.83□□□□□ -1
RNU6-1339P-201ENST00000363574 PELP1Q8IZL8 1130 aaKnown RBP8.82□□□□□ -1
RNU6-1339P-201ENST00000363574 SEC24BO95487 1268 aa8.81□□□□□ -1
RNU6-1339P-201ENST00000363574 PTCD2Q8WV60 388 aaKnown RBP8.81□□□□□ -1
RNU6-1339P-201ENST00000363574 TTLL12Q14166 644 aaPredicted RBP8.79□□□□□ -1
RNU6-1339P-201ENST00000363574 RSPH6AQ9H0K4 717 aa8.79□□□□□ -1
RNU6-1339P-201ENST00000363574 ANO8Q9HCE9 1232 aaPredicted RBP8.79□□□□□ -1
RNU6-1339P-201ENST00000363574 POTEFA5A3E0 1075 aa8.78□□□□□ -1
RNU6-1339P-201ENST00000363574 GABBR2O75899 941 aa8.78□□□□□ -1
RNU6-1339P-201ENST00000363574 MS4A1P11836 297 aa8.77□□□□□ -1.01
RNU6-1339P-201ENST00000363574 GIGYF2Q6Y7W6 1299 aaKnown RBP8.77□□□□□ -1.01
RNU6-1339P-201ENST00000363574 CDHR5Q9HBB8 845 aa8.77□□□□□ -1.01
RNU6-1339P-201ENST00000363574 GOPCQ9HD26 462 aa8.77□□□□□ -1.01
RNU6-1339P-201ENST00000363574 SLC34A2O95436 690 aa8.76□□□□□ -1.01
RNU6-1339P-201ENST00000363574 REPIN1Q9BWE0 567 aaKnown RBP8.76□□□□□ -1.01
RNU6-1339P-201ENST00000363574 NPDC1Q9NQX5 325 aaPredicted RBP8.76□□□□□ -1.01
RNU6-1339P-201ENST00000363574 EN1Q05925 392 aaPredicted RBP8.75□□□□□ -1.01
RNU6-1339P-201ENST00000363574 SLC39A7Q92504 469 aa8.75□□□□□ -1.01
RNU6-1339P-201ENST00000363574 PHF14O94880 888 aa8.74□□□□□ -1.01
RNU6-1339P-201ENST00000363574 EPAS1Q99814 870 aa8.74□□□□□ -1.01
RNU6-1339P-201ENST00000363574 C3orf67Q6ZVT6 689 aa8.73□□□□□ -1.01
RNU6-1339P-201ENST00000363574 DCBLD2Q96PD2 775 aa8.73□□□□□ -1.01
RNU6-1339P-201ENST00000363574 TMUB1Q9BVT8 246 aa8.73□□□□□ -1.01
RNU6-1339P-201ENST00000363574 C7P10643 843 aa8.72□□□□□ -1.01
RNU6-1339P-201ENST00000363574 MAP3K7O43318 606 aa8.71□□□□□ -1.02
RNU6-1339P-201ENST00000363574 ONECUT3O60422 494 aaPredicted RBP8.71□□□□□ -1.02
RNU6-1339P-201ENST00000363574 FLIIQ13045 1269 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms