RNA–Protein interactions for RNA: ENST00000363016.1

RNU6-249P-201, Transcript of RNA, U6 small nuclear 249, pseudogene, humanhuman

BASIC

Gene RNU6-249P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-249P-201ENST00000363016 PATL2C9JE40 543 aaKnown RBP7.24□□□□□ -1.25
RNU6-249P-201ENST00000363016 PWP2Q15269 919 aaKnown RBP7.24□□□□□ -1.25
RNU6-249P-201ENST00000363016 PIAS4Q8N2W9 510 aaPredicted RBP7.24□□□□□ -1.25
RNU6-249P-201ENST00000363016 IL27Q8NEV9 243 aa7.24□□□□□ -1.25
RNU6-249P-201ENST00000363016 WWC1Q8IX03 1113 aa7.22□□□□□ -1.25
RNU6-249P-201ENST00000363016 IPO4Q8TEX9 1081 aaKnown RBP7.22□□□□□ -1.25
RNU6-249P-201ENST00000363016 RIPOR2Q9Y4F9 1068 aa7.22□□□□□ -1.25
RNU6-249P-201ENST00000363016 MKRN3Q13064 507 aaKnown RBP7.21□□□□□ -1.26
RNU6-249P-201ENST00000363016 RTL5Q5HYW3 569 aaPredicted RBP7.21□□□□□ -1.26
RNU6-249P-201ENST00000363016 BARGINQ6ZT62 677 aa7.21□□□□□ -1.26
RNU6-249P-201ENST00000363016 NAP1L2Q9ULW6 460 aaPredicted RBP7.21□□□□□ -1.26
RNU6-249P-201ENST00000363016 TRAK2O60296 914 aa7.2□□□□□ -1.26
RNU6-249P-201ENST00000363016 SPATA32Q96LK8 384 aa7.2□□□□□ -1.26
RNU6-249P-201ENST00000363016 SMARCA5O60264 1052 aaPredicted RBP7.19□□□□□ -1.26
RNU6-249P-201ENST00000363016 GORABQ5T7V8 394 aa7.18□□□□□ -1.26
RNU6-249P-201ENST00000363016 CCDC97Q96F63 343 aaPredicted RBP7.18□□□□□ -1.26
RNU6-249P-201ENST00000363016 SERPINA10Q9UK55 444 aa7.18□□□□□ -1.26
RNU6-249P-201ENST00000363016 A6NJR5 290 aa7.17□□□□□ -1.26
RNU6-249P-201ENST00000363016 LAS1LQ9Y4W2 734 aaKnown RBP7.17□□□□□ -1.26
RNU6-249P-201ENST00000363016 SPDYE4A6NLX3 237 aa7.16□□□□□ -1.26
RNU6-249P-201ENST00000363016 OS9Q13438 667 aaPredicted RBP7.16□□□□□ -1.26
RNU6-249P-201ENST00000363016 SPTY2D1Q68D10 685 aaPredicted RBP7.16□□□□□ -1.26
RNU6-249P-201ENST00000363016 RETREG2Q8NC44 543 aa7.16□□□□□ -1.26
RNU6-249P-201ENST00000363016 RNF216Q9NWF9 866 aaPredicted RBP7.16□□□□□ -1.26
RNU6-249P-201ENST00000363016 FAM50AQ14320 339 aaKnown RBP7.15□□□□□ -1.26
RNU6-249P-201ENST00000363016 FTSJ3Q8IY81 847 aaKnown RBP7.15□□□□□ -1.26
RNU6-249P-201ENST00000363016 HS6ST3Q8IZP7 471 aa7.15□□□□□ -1.26
RNU6-249P-201ENST00000363016 TPD52L2O43399 206 aaKnown RBP7.14□□□□□ -1.27
RNU6-249P-201ENST00000363016 MARCH6O60337 910 aa7.14□□□□□ -1.27
RNU6-249P-201ENST00000363016 DEKP35659 375 aaKnown RBP7.14□□□□□ -1.27
RNU6-249P-201ENST00000363016 SECISBP2LQ93073 1101 aaKnown RBP7.14□□□□□ -1.27
RNU6-249P-201ENST00000363016 ANKRD62A6NC57 917 aa7.13□□□□□ -1.27
RNU6-249P-201ENST00000363016 PHF14O94880 888 aa7.13□□□□□ -1.27
RNU6-249P-201ENST00000363016 IRF5Q13568 498 aa7.13□□□□□ -1.27
RNU6-249P-201ENST00000363016 TMTC2Q8N394 836 aa7.13□□□□□ -1.27
RNU6-249P-201ENST00000363016 ERCC3P19447 782 aa7.12□□□□□ -1.27
RNU6-249P-201ENST00000363016 BRD1O95696 1058 aa7.11□□□□□ -1.27
RNU6-249P-201ENST00000363016 FAM193AP78312 1265 aa7.11□□□□□ -1.27
RNU6-249P-201ENST00000363016 DRC1Q96MC2 740 aa7.11□□□□□ -1.27
RNU6-249P-201ENST00000363016 GPBP1L1Q9HC44 474 aaPredicted RBP7.11□□□□□ -1.27
RNU6-249P-201ENST00000363016 FAM43BQ6ZT52 329 aaPredicted RBP7.1□□□□□ -1.27
RNU6-249P-201ENST00000363016 PROM2Q8N271 834 aa7.1□□□□□ -1.27
RNU6-249P-201ENST00000363016 ZMYND10O75800 440 aa7.09□□□□□ -1.27
RNU6-249P-201ENST00000363016 MAPK8IP2Q13387 824 aaPredicted RBP7.09□□□□□ -1.27
RNU6-249P-201ENST00000363016 RALBP1Q15311 655 aa7.09□□□□□ -1.27
RNU6-249P-201ENST00000363016 TERF2IPQ9NYB0 399 aa7.09□□□□□ -1.27
RNU6-249P-201ENST00000363016 PPME1Q9Y570 386 aa7.09□□□□□ -1.27
RNU6-249P-201ENST00000363016 ZC3H4Q9UPT8 1303 aaKnown RBP7.08□□□□□ -1.28
RNU6-249P-201ENST00000363016 CLGNO14967 610 aa7.08□□□□□ -1.28
RNU6-249P-201ENST00000363016 CLUAP1Q96AJ1 413 aa7.08□□□□□ -1.28
RNU6-249P-201ENST00000363016 HIRIP3Q9BW71 556 aaPredicted RBP7.08□□□□□ -1.28
RNU6-249P-201ENST00000363016 ZNF777Q9ULD5 760 aaPredicted RBP7.08□□□□□ -1.28
RNU6-249P-201ENST00000363016 SALL2Q9Y467 1007 aaPredicted RBP7.08□□□□□ -1.28
RNU6-249P-201ENST00000363016 GTPBP6O43824 516 aaPredicted RBP7.07□□□□□ -1.28
RNU6-249P-201ENST00000363016 SLC4A2P04920 1241 aa7.07□□□□□ -1.28
RNU6-249P-201ENST00000363016 FAM9BQ8IZU0 186 aa7.07□□□□□ -1.28
RNU6-249P-201ENST00000363016 ZNF622Q969S3 477 aaKnown RBP eCLIP7.07□□□□□ -1.28
RNU6-249P-201ENST00000363016 AK7Q96M32 723 aa7.07□□□□□ -1.28
RNU6-249P-201ENST00000363016 KDM4CQ9H3R0 1056 aa7.07□□□□□ -1.28
RNU6-249P-201ENST00000363016 RBM27Q9P2N5 1060 aaKnown RBP7.07□□□□□ -1.28
RNU6-249P-201ENST00000363016 ACIN1Q9UKV3 1341 aaKnown RBP7.06□□□□□ -1.28
RNU6-249P-201ENST00000363016 MCCD1P59942 119 aaPredicted RBP7.06□□□□□ -1.28
RNU6-249P-201ENST00000363016 KCNA1Q09470 495 aa7.06□□□□□ -1.28
RNU6-249P-201ENST00000363016 TSR1Q2NL82 804 aaKnown RBP7.06□□□□□ -1.28
RNU6-249P-201ENST00000363016 KCNV2Q8TDN2 545 aa7.06□□□□□ -1.28
RNU6-249P-201ENST00000363016 UBA5Q9GZZ9 404 aa7.06□□□□□ -1.28
RNU6-249P-201ENST00000363016 CALRP27797 417 aaKnown RBP7.05□□□□□ -1.28
RNU6-249P-201ENST00000363016 MORC4Q8TE76 937 aa7.05□□□□□ -1.28
RNU6-249P-201ENST00000363016 IGSF5Q9NSI5 407 aa7.05□□□□□ -1.28
RNU6-249P-201ENST00000363016 CCER1Q8TC90 406 aaPredicted RBP7.04□□□□□ -1.28
RNU6-249P-201ENST00000363016 CNGB1Q14028 1251 aaPredicted RBP7.03□□□□□ -1.28
RNU6-249P-201ENST00000363016 FOXD4L6Q3SYB3 417 aaPredicted RBP7.03□□□□□ -1.28
RNU6-249P-201ENST00000363016 RBM26Q5T8P6 1007 aaKnown RBP7.03□□□□□ -1.28
RNU6-249P-201ENST00000363016 FOXD4L3Q6VB84 417 aaPredicted RBP7.03□□□□□ -1.28
RNU6-249P-201ENST00000363016 SREK1Q8WXA9 508 aaKnown RBP7.03□□□□□ -1.28
RNU6-249P-201ENST00000363016 UNCXA6NJT0 531 aa7.02□□□□□ -1.29
RNU6-249P-201ENST00000363016 AXDND1Q5T1B0 1012 aaPredicted RBP7.02□□□□□ -1.29
RNU6-249P-201ENST00000363016 WDR78Q5VTH9 848 aa7.02□□□□□ -1.29
RNU6-249P-201ENST00000363016 APBB1IPQ7Z5R6 666 aaPredicted RBP7.02□□□□□ -1.29
RNU6-249P-201ENST00000363016 MICAL1Q8TDZ2 1067 aa7.02□□□□□ -1.29
RNU6-249P-201ENST00000363016 SGSM3Q96HU1 749 aa7.02□□□□□ -1.29
RNU6-249P-201ENST00000363016 SUGT1Q9Y2Z0 365 aa7.02□□□□□ -1.29
RNU6-249P-201ENST00000363016 ANP32CO43423 234 aa7.01□□□□□ -1.29
RNU6-249P-201ENST00000363016 PPP1R15AO75807 674 aaPredicted RBP7.01□□□□□ -1.29
RNU6-249P-201ENST00000363016 CASC1Q6TDU7 716 aa7.01□□□□□ -1.29
RNU6-249P-201ENST00000363016 VGFO15240 615 aaPredicted RBP7□□□□□ -1.29
RNU6-249P-201ENST00000363016 LONRF3Q496Y0 759 aa7□□□□□ -1.29
RNU6-249P-201ENST00000363016 CCDC181Q5TID7 509 aa7□□□□□ -1.29
RNU6-249P-201ENST00000363016 TSHZ1Q6ZSZ6 1077 aa7□□□□□ -1.29
RNU6-249P-201ENST00000363016 ANP32BQ92688 251 aaKnown RBP7□□□□□ -1.29
RNU6-249P-201ENST00000363016 MAGEC2Q9UBF1 373 aaPredicted RBP7□□□□□ -1.29
RNU6-249P-201ENST00000363016 RIOK3O14730 519 aaKnown RBP6.99□□□□□ -1.29
RNU6-249P-201ENST00000363016 NRDCO43847 1150 aa6.99□□□□□ -1.29
RNU6-249P-201ENST00000363016 TCF3P15923 654 aa6.99□□□□□ -1.29
RNU6-249P-201ENST00000363016 NKX1-1Q15270 411 aaPredicted RBP6.99□□□□□ -1.29
RNU6-249P-201ENST00000363016 CHMP4BQ9H444 224 aaKnown RBP6.99□□□□□ -1.29
RNU6-249P-201ENST00000363016 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.99□□□□□ -1.29
RNU6-249P-201ENST00000363016 KCNG1Q9UIX4 513 aa6.99□□□□□ -1.29
RNU6-249P-201ENST00000363016 ARIH1Q9Y4X5 557 aaPredicted RBP6.99□□□□□ -1.29
RNU6-249P-201ENST00000363016 LIG1P18858 919 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms